Cow genome map

Conread name: Ss1.1-Pig4-TMW8052C04.5.5

Conread position: 1045-1271
Cow position: chr14:38389218-38388987 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 157
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 34, 122

Conread position: 1065-1231
Cow position: chr14:20992637-20992471 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 121
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 13, 19

Conread position: 1065-1290
Cow position: chr14:20468790-20469018 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 165
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 40, 14

Conread position: 1078-1290
Cow position: chr14:11724462-11724248 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 155
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 27, 8

Conread position: 1079-1288
Cow position: chr14:37798034-37797823 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 152
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 31, 8

Conread position: 1080-1231
Cow position: chr14:14212171-14212018 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 25, 53

Conread position: 1081-1237
Cow position: chr14:7803255-7803096 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 23, 0

Conread position: 1081-1254
Cow position: chr14:40880231-40880401 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 127
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 23, 119

Conread position: 1081-1288
Cow position: chr14:2826428-2826632 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 146
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 23, 171

Conread position: 1081-1288
Cow position: chr14:18248355-18248141 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 161
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 23, 0

Conread position: 1081-1288
Cow position: chr14:19228408-19228613 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 156
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 23, 93

Conread position: 1081-1288
Cow position: chr14:19792931-19792718 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 153
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 23, 63

Conread position: 1081-1290
Cow position: chr14:22657566-22657781 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 145
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 1082-1289
Cow position: chr14:14234093-14234294 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 151
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 22, 93

Conread position: 1084-1257
Cow position: chr14:37179865-37179689 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 141
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 6, 107

Conread position: 1085-1231
Cow position: chr14:24966126-24965980 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 108
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 109, 104

Conread position: 1085-1288
Cow position: chr14:40989923-40990131 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 157
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 12, 145

Conread position: 1085-1470
Cow position: chr14:20523735-20523338 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 261
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 29, 97

Conread position: 1085-1520
Cow position: chr14:25920873-25920439 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 290
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 171, 72

Conread position: 1087-1288
Cow position: chr14:38677506-38677305 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 148
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 16, 28

Conread position: 1087-1299
Cow position: chr14:30271418-30271204 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 154
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 18, 91

Conread position: 1088-1288
Cow position: chr14:45105469-45105674 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 141
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 161, 0

Conread position: 1090-1274
Cow position: chr14:14108975-14108789 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 144
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 14, 54

Conread position: 1090-1287
Cow position: chr14:21919737-21919536 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 142
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 7, 38

Conread position: 1090-1288
Cow position: chr14:24519782-24519988 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 151
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 14, 0

Conread position: 1090-1288
Cow position: chr14:41673369-41673561 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 150
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 14, 28

Conread position: 1090-1290
Cow position: chr14:10863568-10863367 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 147
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 15, 51

Conread position: 1090-1308
Cow position: chr14:266976-266755 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 158
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 30, 97

Conread position: 1091-1288
Cow position: chr14:41091493-41091291 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 145
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 13, 75

Conread position: 1094-1291
Cow position: chr14:17667832-17667634 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 154
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 158, 129

Conread position: 1096-1284
Cow position: chr14:33872556-33872746 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 141
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 42, 97

Conread position: 1096-1285
Cow position: chr14:13990199-13990007 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 134
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 157, 71

Conread position: 1096-1285
Cow position: chr14:35188035-35187847 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 144
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 96, 35

Conread position: 1096-1288
Cow position: chr14:2017324-2017131 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 142
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 156, 85

Conread position: 1096-1288
Cow position: chr14:7080347-7080155 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 148
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 158, 136

Conread position: 1096-1289
Cow position: chr14:37635156-37634959 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 140
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 159, 0

Conread position: 1096-1290
Cow position: chr14:16190966-16191160 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 143
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 127, 50

Conread position: 1096-1292
Cow position: chr14:12925712-12925512 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 138
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 124, 143

Conread position: 1096-1296
Cow position: chr14:33183979-33184184 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 145
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 9, 0

Conread position: 1096-1300
Cow position: chr14:33516035-33516245 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 159
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 8, 202

Conread position: 1096-1302
Cow position: chr14:19272043-19271832 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 150
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 80, 39

Conread position: 1099-1290
Cow position: chr14:20371977-20372171 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 159, 129

Conread position: 1099-1292
Cow position: chr14:13134434-13134239 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 41, 61

Conread position: 1099-1296
Cow position: chr14:38539116-38538919 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 136
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 162, 47

Conread position: 1100-1288
Cow position: chr14:15853878-15854069 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 136
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 159, 104

Conread position: 1102-1284
Cow position: chr14:25779495-25779307 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 87, 0

Conread position: 1103-1258
Cow position: chr14:14242273-14242119 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 113
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 82, 0

Conread position: 1103-1288
Cow position: chr14:39877214-39877400 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 131
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 133, 115

Conread position: 1103-1288
Cow position: chr14:48270882-48270699 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 133
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 57, 159

Conread position: 1103-1289
Cow position: chr14:23625671-23625487 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 133
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 117, 136

Conread position: 1103-1297
Cow position: chr14:22381156-22381356 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 140
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 55, 138

Conread position: 1104-1231
Cow position: chr14:32450697-32450824 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 96
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1104-1288
Cow position: chr14:21047964-21047776 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 132
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 145, 0

Conread position: 1104-1288
Cow position: chr14:26933231-26933043 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 149, 0

Conread position: 1104-1288
Cow position: chr14:37064168-37064352 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 154, 101

Conread position: 1104-1288
Cow position: chr14:37610654-37610836 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 131
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 163, 64

Conread position: 1106-1288
Cow position: chr14:40777629-40777808 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 161, 60

Conread position: 1111-1288
Cow position: chr14:7963014-7962835 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 136
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 33, 78

Conread position: 1111-1288
Cow position: chr14:11142048-11141867 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 137
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 133, 40

Conread position: 1114-1288
Cow position: chr14:24706926-24706754 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 127
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 153, 86

Conread position: 1114-1294
Cow position: chr14:41921226-41921407 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 143
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 19, 29

Conread position: 1117-1288
Cow position: chr14:7964383-7964555 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 125
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 142, 37

Conread position: 1117-1288
Cow position: chr14:42823237-42823411 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 136, 23

Conread position: 1117-1290
Cow position: chr14:24889685-24889499 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 72, 0

Conread position: 1139-1285
Cow position: chr14:23271202-23271052 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 112, 0

Conread position: 1141-1268
Cow position: chr14:25132878-25132747 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 110, 0

Conread position: 1247-1536
Cow position: chr14:37352648-37352365 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 202
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 125, 106

Conread position: 1250-1531
Cow position: chr14:40990149-40990420 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 190
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 66, 124

Conread position: 1271-1516
Cow position: chr14:22194433-22194191 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 179
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 43, 20

Conread position: 1271-1520
Cow position: chr14:47482300-47482055 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 180
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 43, 69

Conread position: 1271-1528
Cow position: chr14:25132430-25132171 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 184
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 43, 74

Conread position: 1286-1526
Cow position: chr14:13574874-13575111 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 171
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 27, 60

Conread position: 1286-1537
Cow position: chr14:38060562-38060316 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 173
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 28, 79

Conread position: 1286-1548
Cow position: chr14:19792674-19792415 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 189
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 30, 54

Conread position: 1287-1485
Cow position: chr14:30271166-30270961 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 143
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 23, 165

Conread position: 1288-1520
Cow position: chr14:18429847-18429605 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 166
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 26, 13

Conread position: 1288-1522
Cow position: chr14:33601175-33600945 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 168
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 26, 75

Conread position: 1288-1523
Cow position: chr14:5051977-5052207 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 166
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 26, 49

Conread position: 1288-1527
Cow position: chr14:20655052-20655294 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 176
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 22, 64

Conread position: 1288-1528
Cow position: chr14:48270642-48270398 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 171
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 25, 188

Conread position: 1295-1516
Cow position: chr14:23908499-23908718 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 157
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 19, 34

Conread position: 1304-1532
Cow position: chr14:27207710-27207473 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 180
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 47, 7

Conread position: 1305-1519
Cow position: chr14:28689661-28689875 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 156
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 11, 40

Conread position: 1307-1520
Cow position: chr14:41971238-41971033 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 152
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 112, 49

Conread position: 1309-1542
Cow position: chr14:16191606-16191849 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 177
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 5, 170

Conread position: 1315-1539
Cow position: chr14:32924629-32924403 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 166
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 53, 38

Conread position: 1342-1531
Cow position: chr14:35992647-35992832 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 139
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 17, 6

Conread position: 1354-1525
Cow position: chr14:7962732-7962566 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 14, 68

Conread position: 1356-1513
Cow position: chr14:195560-195721 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 118
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 63, 106

Conread position: 1359-1510
Cow position: chr14:29115543-29115389 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 13, 44

Conread position: 1359-1546
Cow position: chr14:41878989-41879182 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 142
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 13, 89

Conread position: 1359-1548
Cow position: chr14:15854180-15854371 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 145
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 20, 111

Conread position: 1371-1518
Cow position: chr14:1806282-1806431 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 117
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 46, 96

Conread position: 1374-1538
Cow position: chr14:21371684-21371521 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 148, 34

Conread position: 1377-1537
Cow position: chr14:7315201-7315360 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 43, 84

Conread position: 1377-1540
Cow position: chr14:18880537-18880698 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 129
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 42, 69

Conread position: 1380-1510
Cow position: chr14:43241033-43241160 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 1382-1540
Cow position: chr14:31697824-31697983 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 115
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 1388-1539
Cow position: chr14:5661859-5661707 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 8, 15

Conread position: 1397-1520
Cow position: chr14:18896525-18896404 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 23, 109

Show alignments to all cow chromosomes.