Cow genome map

Conread name: Ss1.1-Pig4-TMW8052C04.5.5

Conread position: 1081-1212
Cow position:
Alignm length: 134
Alignm identity: 103
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 23, 39

Conread position: 1081-1232
Cow position:
Alignm length: 154
Alignm identity: 118
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 24, 0

Conread position: 1081-1235
Cow position:
Alignm length: 159
Alignm identity: 119
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 17, 0

Conread position: 1081-1252
Cow position:
Alignm length: 173
Alignm identity: 127
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 24, 42

Conread position: 1081-1252
Cow position:
Alignm length: 174
Alignm identity: 136
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 24, 0

Conread position: 1081-1255
Cow position:
Alignm length: 177
Alignm identity: 128
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 23, 0

Conread position: 1081-1285
Cow position:
Alignm length: 208
Alignm identity: 151
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 27, 56

Conread position: 1081-1286
Cow position:
Alignm length: 212
Alignm identity: 148
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 16, 86

Conread position: 1081-1288
Cow position:
Alignm length: 214
Alignm identity: 156
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 23, 80

Conread position: 1081-1288
Cow position:
Alignm length: 214
Alignm identity: 151
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 120, 20

Conread position: 1081-1288
Cow position:
Alignm length: 210
Alignm identity: 150
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 19, 70

Conread position: 1081-1290
Cow position:
Alignm length: 216
Alignm identity: 165
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 23, 0

Conread position: 1081-1292
Cow position:
Alignm length: 224
Alignm identity: 166
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 17, 107

Conread position: 1081-1319
Cow position:
Alignm length: 247
Alignm identity: 175
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 24, 101

Conread position: 1081-1537
Cow position:
Alignm length: 474
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 159

Conread position: 1082-1289
Cow position:
Alignm length: 214
Alignm identity: 158
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 22, 76

Conread position: 1083-1285
Cow position:
Alignm length: 210
Alignm identity: 152
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 21, 100

Conread position: 1084-1257
Cow position:
Alignm length: 175
Alignm identity: 126
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 22, 33

Conread position: 1084-1286
Cow position:
Alignm length: 210
Alignm identity: 150
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 20, 53

Conread position: 1084-1288
Cow position:
Alignm length: 205
Alignm identity: 146
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 1084-1290
Cow position:
Alignm length: 207
Alignm identity: 141
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 168, 0

Conread position: 1084-1301
Cow position:
Alignm length: 220
Alignm identity: 151
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 13, 28

Conread position: 1085-1229
Cow position:
Alignm length: 145
Alignm identity: 108
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 1085-1284
Cow position:
Alignm length: 210
Alignm identity: 149
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 19, 57

Conread position: 1085-1285
Cow position:
Alignm length: 208
Alignm identity: 147
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 17, 33

Conread position: 1085-1288
Cow position:
Alignm length: 210
Alignm identity: 156
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 20, 85

Conread position: 1085-1288
Cow position:
Alignm length: 211
Alignm identity: 150
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 20, 57

Conread position: 1085-1288
Cow position:
Alignm length: 212
Alignm identity: 157
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 15, 60

Conread position: 1085-1349
Cow position:
Alignm length: 274
Alignm identity: 184
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 19, 145

Conread position: 1086-1289
Cow position:
Alignm length: 206
Alignm identity: 144
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 19, 97

Conread position: 1087-1285
Cow position:
Alignm length: 206
Alignm identity: 143
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 1088-1288
Cow position:
Alignm length: 207
Alignm identity: 151
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 16, 0

Conread position: 1088-1289
Cow position:
Alignm length: 212
Alignm identity: 152
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 6, 43

Conread position: 1089-1288
Cow position:
Alignm length: 202
Alignm identity: 148
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 15, 165

Conread position: 1090-1288
Cow position:
Alignm length: 207
Alignm identity: 151
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 14, 41

Conread position: 1090-1288
Cow position:
Alignm length: 206
Alignm identity: 150
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 14, 105

Conread position: 1090-1288
Cow position:
Alignm length: 205
Alignm identity: 146
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 7, 155

Conread position: 1090-1288
Cow position:
Alignm length: 201
Alignm identity: 147
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 14, 172

Conread position: 1090-1288
Cow position:
Alignm length: 201
Alignm identity: 139
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 8, 110

Conread position: 1090-1290
Cow position:
Alignm length: 206
Alignm identity: 147
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 15, 115

Conread position: 1090-1405
Cow position:
Alignm length: 327
Alignm identity: 222
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 163, 9

Conread position: 1094-1290
Cow position:
Alignm length: 202
Alignm identity: 142
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 50, 29

Conread position: 1096-1282
Cow position:
Alignm length: 190
Alignm identity: 132
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 122, 141

Conread position: 1096-1288
Cow position:
Alignm length: 197
Alignm identity: 137
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 150, 39

Conread position: 1096-1288
Cow position:
Alignm length: 196
Alignm identity: 140
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 158, 93

Conread position: 1096-1288
Cow position:
Alignm length: 197
Alignm identity: 138
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 157, 0

Conread position: 1096-1290
Cow position:
Alignm length: 199
Alignm identity: 136
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 155, 35

Conread position: 1099-1283
Cow position:
Alignm length: 189
Alignm identity: 134
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 150, 117

Conread position: 1099-1285
Cow position:
Alignm length: 192
Alignm identity: 137
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 155, 0

Conread position: 1099-1291
Cow position:
Alignm length: 198
Alignm identity: 141
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 119, 143

Conread position: 1102-1288
Cow position:
Alignm length: 191
Alignm identity: 137
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 149, 76

Conread position: 1103-1288
Cow position:
Alignm length: 193
Alignm identity: 139
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 21, 47

Conread position: 1103-1288
Cow position:
Alignm length: 188
Alignm identity: 132
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 154, 0

Conread position: 1103-1288
Cow position:
Alignm length: 193
Alignm identity: 141
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 79, 0

Conread position: 1103-1288
Cow position:
Alignm length: 192
Alignm identity: 141
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 112, 37

Conread position: 1103-1288
Cow position:
Alignm length: 190
Alignm identity: 130
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 133, 0

Conread position: 1103-1288
Cow position:
Alignm length: 190
Alignm identity: 141
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 148, 88

Conread position: 1103-1289
Cow position:
Alignm length: 191
Alignm identity: 133
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 147, 0

Conread position: 1103-1290
Cow position:
Alignm length: 192
Alignm identity: 138
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 151, 51

Conread position: 1103-1291
Cow position:
Alignm length: 192
Alignm identity: 143
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 158, 122

Conread position: 1103-1292
Cow position:
Alignm length: 195
Alignm identity: 141
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 150, 171

Conread position: 1103-1322
Cow position:
Alignm length: 226
Alignm identity: 152
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 82, 149

Conread position: 1103-1536
Cow position:
Alignm length: 445
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 180

Conread position: 1104-1284
Cow position:
Alignm length: 184
Alignm identity: 127
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 131, 0

Conread position: 1104-1288
Cow position:
Alignm length: 189
Alignm identity: 133
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 147, 0

Conread position: 1104-1491
Cow position:
Alignm length: 412
Alignm identity: 270
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 149, 0

Conread position: 1106-1290
Cow position:
Alignm length: 188
Alignm identity: 136
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 11, 0

Conread position: 1109-1288
Cow position:
Alignm length: 184
Alignm identity: 131
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 141, 71

Conread position: 1110-1273
Cow position:
Alignm length: 167
Alignm identity: 121
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 134, 102

Conread position: 1111-1285
Cow position:
Alignm length: 180
Alignm identity: 131
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 111, 80

Conread position: 1112-1321
Cow position:
Alignm length: 214
Alignm identity: 146
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 134, 186

Conread position: 1117-1288
Cow position:
Alignm length: 176
Alignm identity: 129
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 142, 64

Conread position: 1131-1288
Cow position:
Alignm length: 164
Alignm identity: 123
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 60, 0

Conread position: 1131-1288
Cow position:
Alignm length: 162
Alignm identity: 118
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 120, 9

Conread position: 1132-1289
Cow position:
Alignm length: 161
Alignm identity: 120
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 114, 0

Conread position: 1135-1285
Cow position:
Alignm length: 155
Alignm identity: 115
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 116, 10

Conread position: 1136-1285
Cow position:
Alignm length: 155
Alignm identity: 119
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 87, 54

Conread position: 1139-1285
Cow position:
Alignm length: 150
Alignm identity: 112
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 101, 130

Conread position: 1139-1290
Cow position:
Alignm length: 156
Alignm identity: 118
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 114, 63

Conread position: 1141-1288
Cow position:
Alignm length: 152
Alignm identity: 116
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 113, 97

Conread position: 1240-1516
Cow position:
Alignm length: 282
Alignm identity: 188
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 76, 9

Conread position: 1271-1508
Cow position:
Alignm length: 239
Alignm identity: 163
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 120, 91

Conread position: 1271-1510
Cow position:
Alignm length: 243
Alignm identity: 170
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 101, 43

Conread position: 1271-1528
Cow position:
Alignm length: 265
Alignm identity: 184
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 40, 84

Conread position: 1278-1498
Cow position:
Alignm length: 227
Alignm identity: 159
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 38, 77

Conread position: 1281-1506
Cow position:
Alignm length: 232
Alignm identity: 161
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 31, 84

Conread position: 1282-1537
Cow position:
Alignm length: 263
Alignm identity: 183
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 13, 68

Conread position: 1283-1541
Cow position:
Alignm length: 262
Alignm identity: 177
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 15, 32

Conread position: 1288-1516
Cow position:
Alignm length: 233
Alignm identity: 165
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 26, 55

Conread position: 1288-1528
Cow position:
Alignm length: 242
Alignm identity: 171
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 26, 59

Conread position: 1288-1533
Cow position:
Alignm length: 250
Alignm identity: 173
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 26, 113

Conread position: 1288-1539
Cow position:
Alignm length: 259
Alignm identity: 178
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 25, 69

Conread position: 1291-1515
Cow position:
Alignm length: 227
Alignm identity: 159
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 23, 51

Conread position: 1291-1516
Cow position:
Alignm length: 230
Alignm identity: 162
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 23, 49

Conread position: 1291-1518
Cow position:
Alignm length: 234
Alignm identity: 171
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 23, 75

Conread position: 1292-1520
Cow position:
Alignm length: 237
Alignm identity: 163
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 21, 161

Conread position: 1298-1533
Cow position:
Alignm length: 248
Alignm identity: 169
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 45, 15

Conread position: 1301-1521
Cow position:
Alignm length: 231
Alignm identity: 160
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 46, 86

Conread position: 1305-1545
Cow position:
Alignm length: 243
Alignm identity: 177
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 9, 26

Conread position: 1307-1518
Cow position:
Alignm length: 216
Alignm identity: 159
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 80, 33

Conread position: 1311-1518
Cow position:
Alignm length: 211
Alignm identity: 148
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 63, 28

Conread position: 1312-1536
Cow position:
Alignm length: 228
Alignm identity: 153
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 60, 32

Conread position: 1315-1517
Cow position:
Alignm length: 207
Alignm identity: 149
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 45, 85

Conread position: 1337-1503
Cow position:
Alignm length: 170
Alignm identity: 124
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 35, 15

Conread position: 1339-1520
Cow position:
Alignm length: 184
Alignm identity: 131
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 36, 95

Conread position: 1346-1545
Cow position:
Alignm length: 203
Alignm identity: 145
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 11, 44

Conread position: 1351-1527
Cow position:
Alignm length: 178
Alignm identity: 128
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 68, 16

Conread position: 1358-1548
Cow position:
Alignm length: 193
Alignm identity: 136
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 14, 57

Conread position: 1359-1530
Cow position:
Alignm length: 174
Alignm identity: 125
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 15, 53

Conread position: 1359-1536
Cow position:
Alignm length: 179
Alignm identity: 128
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 14, 62

Conread position: 1359-1536
Cow position:
Alignm length: 179
Alignm identity: 134
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 13, 63

Conread position: 1361-1539
Cow position:
Alignm length: 181
Alignm identity: 132
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 11, 62

Conread position: 1373-1516
Cow position:
Alignm length: 146
Alignm identity: 112
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 18, 42

Conread position: 1375-1521
Cow position:
Alignm length: 148
Alignm identity: 112
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 46, 23

Conread position: 1377-1528
Cow position:
Alignm length: 153
Alignm identity: 118
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 42, 14

Conread position: 1380-1538
Cow position:
Alignm length: 162
Alignm identity: 116
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 1384-1537
Cow position:
Alignm length: 156
Alignm identity: 114
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 1384-1546
Cow position:
Alignm length: 165
Alignm identity: 119
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 36, 60

Conread position: 1399-1547
Cow position:
Alignm length: 149
Alignm identity: 110
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 118, 0

Conread position: 1403-1543
Cow position:
Alignm length: 145
Alignm identity: 110
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 16, 0

Show alignments to all cow chromosomes.