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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8052C04.5.5
        

               
Conread position:
               
1002-1292
               

               
Cow position:
               
chr2:42262065-42262361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
67, 32
               

               
Conread position:
               
1022-1303
               

               
Cow position:
               
chr2:17685950-17686245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
13, 69
               

               
Conread position:
               
1065-1288
               

               
Cow position:
               
chr2:82472752-82472528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
7, 24
               

               
Conread position:
               
1079-1231
               

               
Cow position:
               
chr2:8108109-8108263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
1079-1288
               

               
Cow position:
               
chr2:82186490-82186287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
25, 8
               

               
Conread position:
               
1080-1288
               

               
Cow position:
               
chr2:72244609-72244399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
15, 88
               

               
Conread position:
               
1081-1231
               

               
Cow position:
               
chr2:25605029-25604877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
1081-1245
               

               
Cow position:
               
chr2:1627694-1627528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
1081-1284
               

               
Cow position:
               
chr2:18071364-18071572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
24, 122
               

               
Conread position:
               
1081-1285
               

               
Cow position:
               
chr2:70934519-70934310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
14, 7
               

               
Conread position:
               
1081-1288
               

               
Cow position:
               
chr2:9384553-9384343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
16, 89
               

               
Conread position:
               
1081-1288
               

               
Cow position:
               
chr2:32989235-32989025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
27, 66
               

               
Conread position:
               
1081-1288
               

               
Cow position:
               
chr2:42205773-42205561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
23, 150
               

               
Conread position:
               
1081-1288
               

               
Cow position:
               
chr2:59708567-59708783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
24, 202
               

               
Conread position:
               
1081-1289
               

               
Cow position:
               
chr2:36607098-36606888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
23, 149
               

               
Conread position:
               
1081-1289
               

               
Cow position:
               
chr2:62434847-62434635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
21, 8
               

               
Conread position:
               
1081-1289
               

               
Cow position:
               
chr2:64505561-64505350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
23, 68
               

               
Conread position:
               
1081-1290
               

               
Cow position:
               
chr2:29797057-29796840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
23, 103
               

               
Conread position:
               
1081-1291
               

               
Cow position:
               
chr2:8568967-8568754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
23, 156
               

               
Conread position:
               
1081-1292
               

               
Cow position:
               
chr2:80160638-80160425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
23, 75
               

               
Conread position:
               
1081-1294
               

               
Cow position:
               
chr2:38377251-38377463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
23, 67
               

               
Conread position:
               
1082-1274
               

               
Cow position:
               
chr2:545565-545369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
22, 42
               

               
Conread position:
               
1082-1285
               

               
Cow position:
               
chr2:56525162-56524955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
22, 5
               

               
Conread position:
               
1082-1288
               

               
Cow position:
               
chr2:38187586-38187375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
17, 196
               

               
Conread position:
               
1082-1290
               

               
Cow position:
               
chr2:36659311-36659100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
22, 5
               

               
Conread position:
               
1082-1295
               

               
Cow position:
               
chr2:37030227-37030008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
23, 102
               

               
Conread position:
               
1083-1288
               

               
Cow position:
               
chr2:65465215-65465009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
23, 69
               

               
Conread position:
               
1085-1246
               

               
Cow position:
               
chr2:10719339-10719176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
1085-1264
               

               
Cow position:
               
chr2:20340492-20340669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
18, 106
               

               
Conread position:
               
1085-1280
               

               
Cow position:
               
chr2:26113389-26113189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
20, 71
               

               
Conread position:
               
1085-1284
               

               
Cow position:
               
chr2:49634710-49634910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
12, 57
               

               
Conread position:
               
1085-1288
               

               
Cow position:
               
chr2:10470172-10470380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
19, 89
               

               
Conread position:
               
1085-1288
               

               
Cow position:
               
chr2:49190532-49190738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
19, 134
               

               
Conread position:
               
1085-1288
               

               
Cow position:
               
chr2:49622194-49621985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
1085-1288
               

               
Cow position:
               
chr2:77377223-77377438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
1085-1290
               

               
Cow position:
               
chr2:31394461-31394665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
20, 85
               

               
Conread position:
               
1086-1227
               

               
Cow position:
               
chr2:63567198-63567340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
18, 36
               

               
Conread position:
               
1086-1285
               

               
Cow position:
               
chr2:26778058-26778256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
19, 135
               

               
Conread position:
               
1086-1288
               

               
Cow position:
               
chr2:44215892-44216094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
168, 17
               

               
Conread position:
               
1087-1257
               

               
Cow position:
               
chr2:30925655-30925825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
18, 66
               

               
Conread position:
               
1087-1289
               

               
Cow position:
               
chr2:23179228-23179436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
18, 55
               

               
Conread position:
               
1089-1288
               

               
Cow position:
               
chr2:8732176-8731978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
15, 101
               

               
Conread position:
               
1089-1288
               

               
Cow position:
               
chr2:55682503-55682705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
20, 48
               

               
Conread position:
               
1089-1288
               

               
Cow position:
               
chr2:59659224-59659426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
15, 153
               

               
Conread position:
               
1089-1288
               

               
Cow position:
               
chr2:80135636-80135431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
8, 48
               

               
Conread position:
               
1090-1215
               

               
Cow position:
               
chr2:83200062-83200186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
1090-1251
               

               
Cow position:
               
chr2:56580503-56580344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
8, 52
               

               
Conread position:
               
1090-1284
               

               
Cow position:
               
chr2:46054348-46054149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
11, 54
               

               
Conread position:
               
1090-1285
               

               
Cow position:
               
chr2:11161312-11161115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
15, 141
               

               
Conread position:
               
1090-1285
               

               
Cow position:
               
chr2:53378036-53378228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
16, 47
               

               
Conread position:
               
1090-1288
               

               
Cow position:
               
chr2:51303531-51303329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
157, 0
               

               
Conread position:
               
1090-1288
               

               
Cow position:
               
chr2:70403587-70403788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
15, 55
               

               
Conread position:
               
1090-1288
               

               
Cow position:
               
chr2:79572655-79572449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
14, 185
               

               
Conread position:
               
1090-1288
               

               
Cow position:
               
chr2:82027013-82027213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
17, 85
               

               
Conread position:
               
1090-1290
               

               
Cow position:
               
chr2:76803906-76804117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
1090-1290
               

               
Cow position:
               
chr2:82611779-82611579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
15, 93
               

               
Conread position:
               
1090-1294
               

               
Cow position:
               
chr2:29189569-29189357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
1090-1304
               

               
Cow position:
               
chr2:16369673-16369891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
20, 102
               

               
Conread position:
               
1090-1522
               

               
Cow position:
               
chr2:10886637-10887065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
150, 91
               

               
Conread position:
               
1091-1288
               

               
Cow position:
               
chr2:64790291-64790083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
12, 70
               

               
Conread position:
               
1093-1210
               

               
Cow position:
               
chr2:15215921-15216039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
1093-1281
               

               
Cow position:
               
chr2:62038597-62038401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
11, 52
               

               
Conread position:
               
1093-1288
               

               
Cow position:
               
chr2:5717808-5717603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
11, 87
               

               
Conread position:
               
1095-1284
               

               
Cow position:
               
chr2:85347981-85347792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
146, 18
               

               
Conread position:
               
1095-1285
               

               
Cow position:
               
chr2:8345490-8345301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
161, 143
               

               
Conread position:
               
1095-1288
               

               
Cow position:
               
chr2:26275574-26275377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
159, 0
               

               
Conread position:
               
1095-1288
               

               
Cow position:
               
chr2:34998609-34998418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
145, 164
               

               
Conread position:
               
1095-1288
               

               
Cow position:
               
chr2:57993395-57993591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
13, 135
               

               
Conread position:
               
1096-1255
               

               
Cow position:
               
chr2:71882457-71882299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
1096-1285
               

               
Cow position:
               
chr2:431562-431370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
1096-1285
               

               
Cow position:
               
chr2:79894588-79894773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
155, 93
               

               
Conread position:
               
1096-1287
               

               
Cow position:
               
chr2:45492559-45492366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
165, 0
               

               
Conread position:
               
1096-1287
               

               
Cow position:
               
chr2:58127231-58127037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
1096-1288
               

               
Cow position:
               
chr2:852240-852044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
161, 0
               

               
Conread position:
               
1096-1288
               

               
Cow position:
               
chr2:5508057-5508251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
155, 63
               

               
Conread position:
               
1096-1288
               

               
Cow position:
               
chr2:8724449-8724258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
159, 50
               

               
Conread position:
               
1096-1288
               

               
Cow position:
               
chr2:28559897-28560093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
127, 108
               

               
Conread position:
               
1096-1288
               

               
Cow position:
               
chr2:38137305-38137497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
155, 130
               

               
Conread position:
               
1096-1288
               

               
Cow position:
               
chr2:38599108-38598922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
119, 53
               

               
Conread position:
               
1096-1302
               

               
Cow position:
               
chr2:53401227-53401436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
163, 68
               

               
Conread position:
               
1097-1288
               

               
Cow position:
               
chr2:58794529-58794338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
102, 118
               

               
Conread position:
               
1098-1271
               

               
Cow position:
               
chr2:45996317-45996493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
159, 80
               

               
Conread position:
               
1099-1285
               

               
Cow position:
               
chr2:37885058-37885238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
1099-1285
               

               
Cow position:
               
chr2:76298722-76298914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
158, 0
               

               
Conread position:
               
1099-1288
               

               
Cow position:
               
chr2:5105760-5105572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
92, 41
               

               
Conread position:
               
1099-1288
               

               
Cow position:
               
chr2:38592800-38592609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
153, 24
               

               
Conread position:
               
1099-1290
               

               
Cow position:
               
chr2:1670045-1670236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
95, 33
               

               
Conread position:
               
1099-1290
               

               
Cow position:
               
chr2:25718521-25718715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
1100-1288
               

               
Cow position:
               
chr2:55423975-55423785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
141, 95
               

               
Conread position:
               
1100-1289
               

               
Cow position:
               
chr2:39603424-39603235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
151, 70
               

               
Conread position:
               
1100-1292
               

               
Cow position:
               
chr2:39375995-39376190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
158, 128
               

               
Conread position:
               
1101-1288
               

               
Cow position:
               
chr2:42692201-42692388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
140, 9
               

               
Conread position:
               
1101-1288
               

               
Cow position:
               
chr2:43308454-43308638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
155, 90
               

               
Conread position:
               
1102-1285
               

               
Cow position:
               
chr2:39117213-39117403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1102-1288
               

               
Cow position:
               
chr2:26219579-26219763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
153, 22
               

               
Conread position:
               
1102-1288
               

               
Cow position:
               
chr2:32205836-32206021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
152, 14
               

               
Conread position:
               
1102-1307
               

               
Cow position:
               
chr2:27609815-27609608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
147, 126
               

               
Conread position:
               
1103-1229
               

               
Cow position:
               
chr2:41528152-41528278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1103-1284
               

               
Cow position:
               
chr2:14738530-14738709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
148, 21
               

               
Conread position:
               
1103-1284
               

               
Cow position:
               
chr2:44482999-44482815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
121, 26
               

               
Conread position:
               
1103-1285
               

               
Cow position:
               
chr2:27083037-27083219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
155, 32
               

               
Conread position:
               
1103-1285
               

               
Cow position:
               
chr2:84248339-84248153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
119, 62
               

               
Conread position:
               
1103-1288
               

               
Cow position:
               
chr2:7961015-7961204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
1103-1288
               

               
Cow position:
               
chr2:16872449-16872637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
148, 64
               

               
Conread position:
               
1103-1288
               

               
Cow position:
               
chr2:32244138-32243952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
129, 148
               

               
Conread position:
               
1103-1290
               

               
Cow position:
               
chr2:19135375-19135554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
1103-1290
               

               
Cow position:
               
chr2:59443936-59444127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
68, 167
               

               
Conread position:
               
1103-1291
               

               
Cow position:
               
chr2:45294265-45294077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
31, 76
               

               
Conread position:
               
1103-1297
               

               
Cow position:
               
chr2:55387195-55387393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
1103-1297
               

               
Cow position:
               
chr2:61485282-61485480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
115, 136
               

               
Conread position:
               
1103-1297
               

               
Cow position:
               
chr2:78526071-78525872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
46, 85
               

               
Conread position:
               
1103-1309
               

               
Cow position:
               
chr2:45259430-45259219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
126, 136
               

               
Conread position:
               
1103-1309
               

               
Cow position:
               
chr2:52344408-52344617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
127, 147
               

               
Conread position:
               
1103-1309
               

               
Cow position:
               
chr2:56895108-56894901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
158, 37
               

               
Conread position:
               
1103-1314
               

               
Cow position:
               
chr2:3620963-3620753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
16, 38
               

               
Conread position:
               
1104-1273
               

               
Cow position:
               
chr2:44896409-44896240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
119, 38
               

               
Conread position:
               
1104-1285
               

               
Cow position:
               
chr2:77396773-77396957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
31, 37
               

               
Conread position:
               
1104-1309
               

               
Cow position:
               
chr2:68193677-68193877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
151, 87
               

               
Conread position:
               
1110-1286
               

               
Cow position:
               
chr2:53784556-53784729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
130, 62
               

               
Conread position:
               
1113-1288
               

               
Cow position:
               
chr2:29238760-29238587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
1113-1522
               

               
Cow position:
               
chr2:85280629-85280221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
124, 38
               

               
Conread position:
               
1118-1288
               

               
Cow position:
               
chr2:19994130-19993961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
141, 64
               

               
Conread position:
               
1118-1288
               

               
Cow position:
               
chr2:37888248-37888422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
1125-1288
               

               
Cow position:
               
chr2:62498149-62498314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
127, 56
               

               
Conread position:
               
1126-1288
               

               
Cow position:
               
chr2:14424479-14424639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
1131-1286
               

               
Cow position:
               
chr2:63673066-63672908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
126, 73
               

               
Conread position:
               
1135-1271
               

               
Cow position:
               
chr2:82874025-82873885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
1135-1289
               

               
Cow position:
               
chr2:81156534-81156375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
1139-1288
               

               
Cow position:
               
chr2:47496264-47496407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
1141-1532
               

               
Cow position:
               
chr2:71743575-71743974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
51, 204
               

               
Conread position:
               
1169-1548
               

               
Cow position:
               
chr2:56464254-56464631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
96, 53
               

               
Conread position:
               
1221-1519
               

               
Cow position:
               
chr2:20983281-20982999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
35, 19
               

               
Conread position:
               
1248-1539
               

               
Cow position:
               
chr2:77068796-77069089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
68, 25
               

               
Conread position:
               
1265-1531
               

               
Cow position:
               
chr2:18071595-18071858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
35, 46
               

               
Conread position:
               
1268-1519
               

               
Cow position:
               
chr2:65464984-65464725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
48, 180
               

               
Conread position:
               
1271-1519
               

               
Cow position:
               
chr2:26113151-26112902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
45, 214
               

               
Conread position:
               
1271-1526
               

               
Cow position:
               
chr2:64102495-64102242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
47, 93
               

               
Conread position:
               
1288-1500
               

               
Cow position:
               
chr2:27813443-27813228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
23, 62
               

               
Conread position:
               
1288-1515
               

               
Cow position:
               
chr2:78230737-78230964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
71, 53
               

               
Conread position:
               
1288-1519
               

               
Cow position:
               
chr2:42467489-42467253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
26, 202
               

               
Conread position:
               
1288-1524
               

               
Cow position:
               
chr2:38118949-38118715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
41, 16
               

               
Conread position:
               
1288-1526
               

               
Cow position:
               
chr2:80477494-80477250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
26, 99
               

               
Conread position:
               
1288-1528
               

               
Cow position:
               
chr2:15242246-15242488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
26, 46
               

               
Conread position:
               
1288-1535
               

               
Cow position:
               
chr2:13944925-13945169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
26, 53
               

               
Conread position:
               
1288-1535
               

               
Cow position:
               
chr2:52671550-52671797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
26, 78
               

               
Conread position:
               
1288-1537
               

               
Cow position:
               
chr2:43627122-43626882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
26, 46
               

               
Conread position:
               
1289-1470
               

               
Cow position:
               
chr2:59842552-59842370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
25, 54
               

               
Conread position:
               
1291-1540
               

               
Cow position:
               
chr2:49634967-49635214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
23, 64
               

               
Conread position:
               
1292-1520
               

               
Cow position:
               
chr2:37068697-37068463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
23, 46
               

               
Conread position:
               
1294-1494
               

               
Cow position:
               
chr2:77316115-77315914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
20, 53
               

               
Conread position:
               
1300-1519
               

               
Cow position:
               
chr2:86053655-86053871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
14, 66
               

               
Conread position:
               
1300-1540
               

               
Cow position:
               
chr2:16355216-16355450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
9, 46
               

               
Conread position:
               
1301-1548
               

               
Cow position:
               
chr2:62498407-62498661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
5, 24
               

               
Conread position:
               
1310-1545
               

               
Cow position:
               
chr2:24670738-24670974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
59, 32
               

               
Conread position:
               
1311-1521
               

               
Cow position:
               
chr2:79659190-79658982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
56, 34
               

               
Conread position:
               
1311-1539
               

               
Cow position:
               
chr2:16424242-16424476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
1311-1542
               

               
Cow position:
               
chr2:34046816-34046586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
26, 17
               

               
Conread position:
               
1315-1494
               

               
Cow position:
               
chr2:544616-544441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
57, 17
               

               
Conread position:
               
1315-1534
               

               
Cow position:
               
chr2:39479061-39478848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
34, 26
               

               
Conread position:
               
1323-1545
               

               
Cow position:
               
chr2:71258558-71258783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
37, 18
               

               
Conread position:
               
1338-1534
               

               
Cow position:
               
chr2:3785645-3785451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
81, 31
               

               
Conread position:
               
1346-1506
               

               
Cow position:
               
chr2:70403890-70404053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
27, 79
               

               
Conread position:
               
1346-1520
               

               
Cow position:
               
chr2:62245660-62245482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
1348-1546
               

               
Cow position:
               
chr2:73345926-73346131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
11, 61
               

               
Conread position:
               
1349-1522
               

               
Cow position:
               
chr2:71590358-71590183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
7, 26
               

               
Conread position:
               
1352-1523
               

               
Cow position:
               
chr2:55842162-55842335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
40, 126
               

               
Conread position:
               
1352-1536
               

               
Cow position:
               
chr2:61956705-61956889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
33, 47
               

               
Conread position:
               
1353-1548
               

               
Cow position:
               
chr2:43308800-43308999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
69, 16
               

               
Conread position:
               
1357-1527
               

               
Cow position:
               
chr2:6953499-6953326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
1358-1516
               

               
Cow position:
               
chr2:64805617-64805776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
14, 39
               

               
Conread position:
               
1358-1520
               

               
Cow position:
               
chr2:82966569-82966416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
14, 50
               

               
Conread position:
               
1358-1534
               

               
Cow position:
               
chr2:71652409-71652234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
62, 19
               

               
Conread position:
               
1358-1536
               

               
Cow position:
               
chr2:38260374-38260550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
15, 24
               

               
Conread position:
               
1358-1548
               

               
Cow position:
               
chr2:42423063-42422879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
14, 41
               

               
Conread position:
               
1359-1520
               

               
Cow position:
               
chr2:53412241-53412080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
61, 5
               

               
Conread position:
               
1360-1541
               

               
Cow position:
               
chr2:1658786-1658969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
1361-1518
               

               
Cow position:
               
chr2:79554238-79554082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
11, 28
               

               
Conread position:
               
1361-1534
               

               
Cow position:
               
chr2:44658926-44659102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1361-1545
               

               
Cow position:
               
chr2:84517997-84518185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
11, 66
               

               
Conread position:
               
1364-1536
               

               
Cow position:
               
chr2:51460383-51460557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
8, 21
               

               
Conread position:
               
1369-1535
               

               
Cow position:
               
chr2:75409727-75409889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
25, 105
               

               
Conread position:
               
1371-1515
               

               
Cow position:
               
chr2:35388682-35388827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
1372-1546
               

               
Cow position:
               
chr2:68975337-68975168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
1374-1511
               

               
Cow position:
               
chr2:29784328-29784464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
45, 64
               

               
Conread position:
               
1374-1520
               

               
Cow position:
               
chr2:78115063-78115213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
9, 19
               

               
Conread position:
               
1375-1532
               

               
Cow position:
               
chr2:39238489-39238647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
45, 23
               

               
Conread position:
               
1379-1541
               

               
Cow position:
               
chr2:39306105-39306265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
12, 87
               

               
Conread position:
               
1381-1544
               

               
Cow position:
               
chr2:3710830-3710993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
13, 33
               

               
Conread position:
               
1397-1546
               

               
Cow position:
               
chr2:10851360-10851510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
23, 38
               

               
Conread position:
               
1402-1519
               

               
Cow position:
               
chr2:22064658-22064776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
17, 0
               
Show alignments to all cow chromosomes.