Cow genome map

Conread name: Ss1.1-Pig4-TMW8052C04.5.5

Conread position: 985-1232
Cow position:
Alignm length: 254
Alignm identity: 169
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 14, 48

Conread position: 1071-1290
Cow position:
Alignm length: 227
Alignm identity: 161
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 15, 72

Conread position: 1071-1291
Cow position:
Alignm length: 229
Alignm identity: 165
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 11, 137

Conread position: 1079-1284
Cow position:
Alignm length: 213
Alignm identity: 150
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 25, 8

Conread position: 1079-1288
Cow position:
Alignm length: 216
Alignm identity: 157
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 27, 8

Conread position: 1079-1288
Cow position:
Alignm length: 215
Alignm identity: 153
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 130, 22

Conread position: 1080-1288
Cow position:
Alignm length: 216
Alignm identity: 154
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 24, 64

Conread position: 1080-1290
Cow position:
Alignm length: 214
Alignm identity: 145
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 24, 0

Conread position: 1081-1231
Cow position:
Alignm length: 153
Alignm identity: 115
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 23, 0

Conread position: 1081-1274
Cow position:
Alignm length: 199
Alignm identity: 147
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 24, 116

Conread position: 1081-1278
Cow position:
Alignm length: 206
Alignm identity: 145
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 23, 122

Conread position: 1081-1285
Cow position:
Alignm length: 212
Alignm identity: 155
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 20, 43

Conread position: 1081-1285
Cow position:
Alignm length: 211
Alignm identity: 153
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 23, 52

Conread position: 1081-1286
Cow position:
Alignm length: 221
Alignm identity: 156
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 22, 62

Conread position: 1081-1286
Cow position:
Alignm length: 213
Alignm identity: 146
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 24, 126

Conread position: 1081-1288
Cow position:
Alignm length: 214
Alignm identity: 160
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 17, 0

Conread position: 1081-1288
Cow position:
Alignm length: 210
Alignm identity: 150
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 23, 16

Conread position: 1081-1288
Cow position:
Alignm length: 212
Alignm identity: 150
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 25, 0

Conread position: 1081-1288
Cow position:
Alignm length: 217
Alignm identity: 151
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 24, 64

Conread position: 1081-1289
Cow position:
Alignm length: 215
Alignm identity: 157
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 24, 68

Conread position: 1082-1257
Cow position:
Alignm length: 178
Alignm identity: 130
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 23, 96

Conread position: 1082-1285
Cow position:
Alignm length: 210
Alignm identity: 152
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 23, 152

Conread position: 1082-1285
Cow position:
Alignm length: 210
Alignm identity: 155
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 23, 137

Conread position: 1082-1287
Cow position:
Alignm length: 212
Alignm identity: 148
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 22, 121

Conread position: 1082-1288
Cow position:
Alignm length: 214
Alignm identity: 152
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 49, 107

Conread position: 1082-1290
Cow position:
Alignm length: 215
Alignm identity: 160
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 22, 7

Conread position: 1083-1293
Cow position:
Alignm length: 219
Alignm identity: 156
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 22, 0

Conread position: 1085-1285
Cow position:
Alignm length: 207
Alignm identity: 148
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 19, 46

Conread position: 1085-1288
Cow position:
Alignm length: 211
Alignm identity: 157
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 20, 0

Conread position: 1085-1288
Cow position:
Alignm length: 214
Alignm identity: 150
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 19, 134

Conread position: 1085-1288
Cow position:
Alignm length: 210
Alignm identity: 150
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 20, 113

Conread position: 1085-1288
Cow position:
Alignm length: 210
Alignm identity: 152
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 19, 93

Conread position: 1088-1288
Cow position:
Alignm length: 211
Alignm identity: 150
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 6, 141

Conread position: 1089-1283
Cow position:
Alignm length: 202
Alignm identity: 142
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 21, 38

Conread position: 1089-1284
Cow position:
Alignm length: 206
Alignm identity: 149
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 13, 57

Conread position: 1089-1288
Cow position:
Alignm length: 209
Alignm identity: 145
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 15, 138

Conread position: 1090-1284
Cow position:
Alignm length: 203
Alignm identity: 154
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 15, 53

Conread position: 1090-1288
Cow position:
Alignm length: 206
Alignm identity: 144
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 7, 46

Conread position: 1090-1288
Cow position:
Alignm length: 207
Alignm identity: 146
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 15, 67

Conread position: 1090-1288
Cow position:
Alignm length: 204
Alignm identity: 145
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 7, 181

Conread position: 1090-1289
Cow position:
Alignm length: 207
Alignm identity: 152
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 13, 77

Conread position: 1091-1285
Cow position:
Alignm length: 201
Alignm identity: 140
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 13, 87

Conread position: 1092-1304
Cow position:
Alignm length: 220
Alignm identity: 154
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 13, 116

Conread position: 1093-1284
Cow position:
Alignm length: 198
Alignm identity: 140
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 11, 179

Conread position: 1093-1288
Cow position:
Alignm length: 205
Alignm identity: 147
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 11, 61

Conread position: 1093-1288
Cow position:
Alignm length: 199
Alignm identity: 140
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 16, 29

Conread position: 1095-1288
Cow position:
Alignm length: 200
Alignm identity: 142
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 9, 0

Conread position: 1096-1283
Cow position:
Alignm length: 194
Alignm identity: 139
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 8, 0

Conread position: 1096-1288
Cow position:
Alignm length: 196
Alignm identity: 134
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 155, 0

Conread position: 1096-1288
Cow position:
Alignm length: 197
Alignm identity: 145
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 155, 69

Conread position: 1096-1288
Cow position:
Alignm length: 198
Alignm identity: 152
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 44, 39

Conread position: 1096-1290
Cow position:
Alignm length: 195
Alignm identity: 143
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 92, 0

Conread position: 1096-1292
Cow position:
Alignm length: 200
Alignm identity: 139
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 117, 26

Conread position: 1096-1293
Cow position:
Alignm length: 198
Alignm identity: 134
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 174, 0

Conread position: 1096-1298
Cow position:
Alignm length: 214
Alignm identity: 156
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 30, 193

Conread position: 1096-1301
Cow position:
Alignm length: 210
Alignm identity: 146
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 169, 140

Conread position: 1096-1307
Cow position:
Alignm length: 220
Alignm identity: 150
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 17, 95

Conread position: 1097-1288
Cow position:
Alignm length: 195
Alignm identity: 143
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 162, 69

Conread position: 1097-1293
Cow position:
Alignm length: 202
Alignm identity: 137
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 1098-1288
Cow position:
Alignm length: 196
Alignm identity: 143
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 42, 78

Conread position: 1100-1252
Cow position:
Alignm length: 160
Alignm identity: 120
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 92, 135

Conread position: 1101-1257
Cow position:
Alignm length: 158
Alignm identity: 117
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 85, 12

Conread position: 1102-1288
Cow position:
Alignm length: 188
Alignm identity: 130
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 153, 136

Conread position: 1102-1296
Cow position:
Alignm length: 201
Alignm identity: 144
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 89, 103

Conread position: 1102-1304
Cow position:
Alignm length: 207
Alignm identity: 145
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 144, 0

Conread position: 1103-1236
Cow position:
Alignm length: 135
Alignm identity: 103
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 15, 127

Conread position: 1103-1257
Cow position:
Alignm length: 159
Alignm identity: 120
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 42, 0

Conread position: 1103-1293
Cow position:
Alignm length: 195
Alignm identity: 141
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 18, 55

Conread position: 1103-1308
Cow position:
Alignm length: 213
Alignm identity: 145
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 138, 0

Conread position: 1104-1280
Cow position:
Alignm length: 183
Alignm identity: 132
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 50, 127

Conread position: 1104-1285
Cow position:
Alignm length: 186
Alignm identity: 134
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 149, 85

Conread position: 1104-1290
Cow position:
Alignm length: 187
Alignm identity: 132
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 87, 0

Conread position: 1105-1538
Cow position:
Alignm length: 443
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 77

Conread position: 1106-1276
Cow position:
Alignm length: 175
Alignm identity: 133
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 144, 159

Conread position: 1106-1288
Cow position:
Alignm length: 187
Alignm identity: 136
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 156, 108

Conread position: 1107-1288
Cow position:
Alignm length: 188
Alignm identity: 136
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 96, 15

Conread position: 1109-1278
Cow position:
Alignm length: 172
Alignm identity: 122
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 128, 13

Conread position: 1111-1288
Cow position:
Alignm length: 182
Alignm identity: 130
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 143, 59

Conread position: 1112-1292
Cow position:
Alignm length: 181
Alignm identity: 130
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 149, 0

Conread position: 1114-1249
Cow position:
Alignm length: 136
Alignm identity: 104
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 131, 0

Conread position: 1117-1290
Cow position:
Alignm length: 174
Alignm identity: 126
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 132, 0

Conread position: 1118-1271
Cow position:
Alignm length: 158
Alignm identity: 116
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 137, 24

Conread position: 1119-1288
Cow position:
Alignm length: 174
Alignm identity: 125
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 130, 35

Conread position: 1120-1290
Cow position:
Alignm length: 175
Alignm identity: 126
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 135, 85

Conread position: 1121-1284
Cow position:
Alignm length: 171
Alignm identity: 129
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 137, 5

Conread position: 1123-1456
Cow position:
Alignm length: 338
Alignm identity: 216
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 120, 146

Conread position: 1123-1481
Cow position:
Alignm length: 364
Alignm identity: 235
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 120, 146

Conread position: 1124-1288
Cow position:
Alignm length: 168
Alignm identity: 126
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 121, 0

Conread position: 1125-1290
Cow position:
Alignm length: 170
Alignm identity: 122
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 125, 70

Conread position: 1133-1285
Cow position:
Alignm length: 157
Alignm identity: 114
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 120, 0

Conread position: 1135-1285
Cow position:
Alignm length: 153
Alignm identity: 120
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 106, 112

Conread position: 1223-1544
Cow position:
Alignm length: 325
Alignm identity: 213
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 262, 13

Conread position: 1271-1535
Cow position:
Alignm length: 275
Alignm identity: 191
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 43, 137

Conread position: 1271-1542
Cow position:
Alignm length: 278
Alignm identity: 193
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 43, 104

Conread position: 1273-1533
Cow position:
Alignm length: 265
Alignm identity: 175
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 51, 70

Conread position: 1288-1507
Cow position:
Alignm length: 224
Alignm identity: 156
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 26, 53

Conread position: 1288-1511
Cow position:
Alignm length: 225
Alignm identity: 151
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 130, 61

Conread position: 1288-1520
Cow position:
Alignm length: 236
Alignm identity: 161
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 24, 75

Conread position: 1288-1528
Cow position:
Alignm length: 245
Alignm identity: 170
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 18, 55

Conread position: 1288-1538
Cow position:
Alignm length: 256
Alignm identity: 183
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 26, 55

Conread position: 1288-1538
Cow position:
Alignm length: 259
Alignm identity: 183
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 47, 34

Conread position: 1288-1538
Cow position:
Alignm length: 253
Alignm identity: 181
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 26, 55

Conread position: 1288-1540
Cow position:
Alignm length: 255
Alignm identity: 170
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 26, 55

Conread position: 1288-1541
Cow position:
Alignm length: 261
Alignm identity: 176
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 26, 125

Conread position: 1288-1547
Cow position:
Alignm length: 263
Alignm identity: 184
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 26, 70

Conread position: 1289-1537
Cow position:
Alignm length: 255
Alignm identity: 177
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 25, 60

Conread position: 1291-1532
Cow position:
Alignm length: 245
Alignm identity: 185
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 23, 15

Conread position: 1300-1533
Cow position:
Alignm length: 241
Alignm identity: 168
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 13, 231

Conread position: 1307-1534
Cow position:
Alignm length: 229
Alignm identity: 165
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 65, 11

Conread position: 1310-1533
Cow position:
Alignm length: 228
Alignm identity: 159
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 109, 22

Conread position: 1311-1538
Cow position:
Alignm length: 244
Alignm identity: 168
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 31, 187

Conread position: 1332-1477
Cow position:
Alignm length: 147
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 87, 10

Conread position: 1332-1544
Cow position:
Alignm length: 214
Alignm identity: 161
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 47, 16

Conread position: 1342-1548
Cow position:
Alignm length: 211
Alignm identity: 151
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 24, 97

Conread position: 1346-1540
Cow position:
Alignm length: 196
Alignm identity: 139
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 81, 97

Conread position: 1353-1514
Cow position:
Alignm length: 165
Alignm identity: 130
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 6, 19

Conread position: 1353-1515
Cow position:
Alignm length: 168
Alignm identity: 124
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 7, 0

Conread position: 1353-1520
Cow position:
Alignm length: 169
Alignm identity: 125
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 20, 90

Conread position: 1356-1520
Cow position:
Alignm length: 167
Alignm identity: 123
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 16, 91

Conread position: 1357-1518
Cow position:
Alignm length: 165
Alignm identity: 120
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 16, 42

Conread position: 1357-1540
Cow position:
Alignm length: 186
Alignm identity: 134
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 20, 42

Conread position: 1358-1536
Cow position:
Alignm length: 180
Alignm identity: 131
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 76, 6

Conread position: 1362-1535
Cow position:
Alignm length: 176
Alignm identity: 135
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 10, 0

Conread position: 1362-1541
Cow position:
Alignm length: 181
Alignm identity: 130
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 6, 50

Conread position: 1371-1488
Cow position:
Alignm length: 119
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 48, 31

Conread position: 1371-1536
Cow position:
Alignm length: 173
Alignm identity: 126
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 49, 116

Conread position: 1371-1543
Cow position:
Alignm length: 174
Alignm identity: 138
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 48, 83

Conread position: 1376-1515
Cow position:
Alignm length: 141
Alignm identity: 109
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 63, 37

Conread position: 1376-1543
Cow position:
Alignm length: 170
Alignm identity: 131
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 43, 0

Conread position: 1381-1520
Cow position:
Alignm length: 142
Alignm identity: 109
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 44, 65

Conread position: 1383-1531
Cow position:
Alignm length: 151
Alignm identity: 117
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 139, 37

Conread position: 1409-1542
Cow position:
Alignm length: 136
Alignm identity: 105
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 10, 0

Show alignments to all cow chromosomes.