Cow genome map

Conread name: Ss1.1-Pig4-TMW8052C04.5.5

Conread position: 1045-1285
Cow position: chr26:16974795-16975036 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 167
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 35, 43

Conread position: 1065-1285
Cow position: chr26:11150870-11151095 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 155
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 15, 23

Conread position: 1079-1290
Cow position: chr26:35147794-35147582 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 161
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 26, 8

Conread position: 1081-1249
Cow position: chr26:19872431-19872268 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 124
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 25, 84

Conread position: 1081-1251
Cow position: chr26:9245495-9245667 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 23, 0

Conread position: 1081-1287
Cow position: chr26:7899014-7898804 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 155
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 23, 196

Conread position: 1081-1288
Cow position: chr26:9494117-9493906 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 153
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 23, 64

Conread position: 1081-1288
Cow position: chr26:12223857-12224066 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 149
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 180, 29

Conread position: 1081-1288
Cow position: chr26:30215718-30215930 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 147
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 61, 0

Conread position: 1081-1288
Cow position: chr26:32876025-32876235 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 154
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 16, 0

Conread position: 1081-1290
Cow position: chr26:20248263-20248476 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 159
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 24, 116

Conread position: 1081-1290
Cow position: chr26:30482660-30482866 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 155
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 23, 69

Conread position: 1081-1305
Cow position: chr26:25477707-25477930 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 160
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 24, 128

Conread position: 1082-1288
Cow position: chr26:7522043-7521836 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 157
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 22, 103

Conread position: 1082-1288
Cow position: chr26:11962973-11963181 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 149
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 143, 18

Conread position: 1083-1309
Cow position: chr26:8441999-8441775 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 153
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 170, 207

Conread position: 1085-1288
Cow position: chr26:28961798-28961589 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 154
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 20, 71

Conread position: 1089-1289
Cow position: chr26:19082403-19082600 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 151
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 21, 68

Conread position: 1090-1252
Cow position: chr26:22603908-22604067 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 14, 52

Conread position: 1090-1270
Cow position: chr26:11805138-11804959 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 14, 26

Conread position: 1090-1285
Cow position: chr26:16485989-16486188 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 7, 92

Conread position: 1090-1288
Cow position: chr26:19717628-19717432 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 150
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 14, 94

Conread position: 1093-1288
Cow position: chr26:20134022-20134227 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 150
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 11, 0

Conread position: 1094-1288
Cow position: chr26:10332094-10332290 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 142
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 10, 185

Conread position: 1095-1281
Cow position: chr26:19014178-19014369 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 134
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 90, 0

Conread position: 1096-1282
Cow position: chr26:14399343-14399150 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 147
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 35, 0

Conread position: 1096-1288
Cow position: chr26:32991541-32991343 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 137
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 1096-1293
Cow position: chr26:23963364-23963564 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 142
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 162, 0

Conread position: 1096-1299
Cow position: chr26:13344082-13343872 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 143
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 1096-1309
Cow position: chr26:10460902-10461118 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 156
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 158, 209

Conread position: 1099-1290
Cow position: chr26:8265173-8265365 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 156, 69

Conread position: 1099-1304
Cow position: chr26:10599463-10599259 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 145
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 155, 117

Conread position: 1099-1308
Cow position: chr26:5198877-5199090 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 157
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 113, 184

Conread position: 1102-1257
Cow position: chr26:7479104-7478945 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 1102-1288
Cow position: chr26:8438071-8437890 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 149, 51

Conread position: 1102-1288
Cow position: chr26:9455356-9455170 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 126
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1103-1232
Cow position: chr26:13521874-13521745 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 37, 32

Conread position: 1103-1288
Cow position: chr26:6323327-6323516 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 135
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 37, 32

Conread position: 1103-1288
Cow position: chr26:6736535-6736724 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 142
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 151, 0

Conread position: 1103-1288
Cow position: chr26:11959983-11959795 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 140
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 150, 37

Conread position: 1103-1288
Cow position: chr26:19639992-19640176 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 149
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 81, 100

Conread position: 1103-1288
Cow position: chr26:21980795-21980608 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 139
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 148, 51

Conread position: 1103-1288
Cow position: chr26:24027097-24027279 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 139
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 56, 0

Conread position: 1103-1290
Cow position: chr26:32617222-32617031 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 138
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 148, 0

Conread position: 1104-1285
Cow position: chr26:12993151-12993329 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 141
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 151, 137

Conread position: 1106-1288
Cow position: chr26:14438391-14438208 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 138
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 81, 135

Conread position: 1109-1253
Cow position: chr26:30046318-30046175 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 111, 130

Conread position: 1123-1288
Cow position: chr26:15624363-15624191 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 65, 0

Conread position: 1145-1288
Cow position: chr26:11788583-11788730 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 108, 0

Conread position: 1168-1292
Cow position: chr26:23212596-23212724 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 84, 43

Conread position: 1179-1521
Cow position: chr26:32467022-32467384 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 245
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 26, 84

Conread position: 1217-1515
Cow position: chr26:11629591-11629884 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 202
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 89, 16

Conread position: 1271-1515
Cow position: chr26:23212751-23213005 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 180
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 43, 140

Conread position: 1271-1520
Cow position: chr26:19859385-19859635 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 178
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 44, 69

Conread position: 1271-1534
Cow position: chr26:12993366-12993624 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 175
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 33, 10

Conread position: 1271-1539
Cow position: chr26:26828467-26828741 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 193
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 97, 82

Conread position: 1271-1541
Cow position: chr26:16723999-16723733 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 192
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 45, 10

Conread position: 1286-1516
Cow position: chr26:21659590-21659822 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 171
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 28, 67

Conread position: 1288-1512
Cow position: chr26:9473398-9473182 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 161
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 131, 23

Conread position: 1288-1518
Cow position: chr26:26628024-26627783 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 167
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 11, 0

Conread position: 1288-1520
Cow position: chr26:24376382-24376151 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 167
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 24, 55

Conread position: 1288-1522
Cow position: chr26:25477965-25478205 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 177
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 26, 164

Conread position: 1288-1528
Cow position: chr26:6736778-6737023 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 170
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 26, 60

Conread position: 1288-1534
Cow position: chr26:19861942-19862189 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 179
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 26, 45

Conread position: 1288-1536
Cow position: chr26:25367405-25367649 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 186
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 16, 47

Conread position: 1288-1544
Cow position: chr26:19132759-19133018 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 187
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 12, 32

Conread position: 1291-1533
Cow position: chr26:14438156-14437918 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 173
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 24, 72

Conread position: 1295-1543
Cow position: chr26:6689165-6688923 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 174
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 21, 67

Conread position: 1299-1520
Cow position: chr26:8120926-8121158 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 160
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 41, 16

Conread position: 1305-1519
Cow position: chr26:11651442-11651220 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 160
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 9, 163

Conread position: 1305-1524
Cow position: chr26:28723352-28723569 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 154
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 9, 21

Conread position: 1305-1528
Cow position: chr26:24276518-24276301 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 161
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 115, 47

Conread position: 1311-1534
Cow position: chr26:19328316-19328532 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 161
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 63, 22

Conread position: 1323-1523
Cow position: chr26:27832968-27833166 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 140
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 49, 21

Conread position: 1333-1527
Cow position: chr26:20248671-20248862 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 142
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 39, 30

Conread position: 1340-1519
Cow position: chr26:21691215-21691033 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 136
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 13, 26

Conread position: 1344-1526
Cow position: chr26:24076646-24076829 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 131
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 18, 110

Conread position: 1345-1528
Cow position: chr26:22695984-22696171 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 130
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 1346-1544
Cow position: chr26:16612490-16612698 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 158
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 11, 189

Conread position: 1348-1536
Cow position: chr26:12530947-12530751 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 9, 37

Conread position: 1349-1532
Cow position: chr26:8506680-8506495 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 17, 97

Conread position: 1351-1514
Cow position: chr26:30323291-30323129 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 7, 69

Conread position: 1357-1542
Cow position: chr26:29529606-29529427 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 135
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 15, 62

Conread position: 1358-1506
Cow position: chr26:22400522-22400374 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 14, 49

Conread position: 1358-1522
Cow position: chr26:14049976-14050143 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 136
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 14, 51

Conread position: 1358-1538
Cow position: chr26:8609501-8609325 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 16, 42

Conread position: 1358-1538
Cow position: chr26:21638625-21638444 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 14, 170

Conread position: 1358-1545
Cow position: chr26:34748368-34748177 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 147
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 15, 0

Conread position: 1359-1540
Cow position: chr26:7898696-7898517 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 131
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 13, 52

Conread position: 1359-1540
Cow position: chr26:22754912-22754735 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 13, 44

Conread position: 1359-1548
Cow position: chr26:22351644-22351453 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 141
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 15, 171

Conread position: 1360-1545
Cow position: chr26:31609981-31610164 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 133
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 13, 72

Conread position: 1360-1547
Cow position: chr26:19871810-19871621 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 142
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 57, 123

Conread position: 1371-1509
Cow position: chr26:22221870-22222011 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 1371-1522
Cow position: chr26:25667029-25666875 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 112
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 1371-1523
Cow position: chr26:9493758-9493611 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 20, 43

Conread position: 1371-1537
Cow position: chr26:29752388-29752556 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 48, 26

Conread position: 1382-1520
Cow position: chr26:8687551-8687687 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 37, 16

Conread position: 1384-1540
Cow position: chr26:17562785-17562942 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 60, 36

Conread position: 1397-1534
Cow position: chr26:8795413-8795547 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 22, 109

Conread position: 1402-1544
Cow position: chr26:22604218-22604360 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 17, 75

Conread position: 1403-1544
Cow position: chr26:21943020-21943158 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 57, 10

Show alignments to all cow chromosomes.