Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8052C04.5.5 |
| Conread position: | 1081-1257 |
| Cow position: | chr27:2084435-2084259 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 17, 61 |
| Conread position: | 1081-1288 |
| Cow position: | chr27:23199933-23199720 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 24, 9 |
| Conread position: | 1082-1257 |
| Cow position: | chr27:14270287-14270114 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 22, 74 |
| Conread position: | 1082-1299 |
| Cow position: | chr27:11677802-11677577 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 15, 222 |
| Conread position: | 1082-1309 |
| Cow position: | chr27:9436629-9436866 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 28, 5 |
| Conread position: | 1086-1288 |
| Cow position: | chr27:25876050-25876251 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 173, 36 |
| Conread position: | 1090-1257 |
| Cow position: | chr27:12586016-12586181 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 14, 81 |
| Conread position: | 1090-1289 |
| Cow position: | chr27:25638307-25638509 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 14, 57 |
| Conread position: | 1090-1519 |
| Cow position: | chr27:12173785-12174189 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 295 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 14, 131 |
| Conread position: | 1091-1211 |
| Cow position: | chr27:23158059-23157941 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 1095-1288 |
| Cow position: | chr27:23793814-23793621 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 151, 10 |
| Conread position: | 1096-1214 |
| Cow position: | chr27:12411841-12411959 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1097-1288 |
| Cow position: | chr27:15509115-15509309 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 58, 145 |
| Conread position: | 1097-1297 |
| Cow position: | chr27:29046754-29046955 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 123, 54 |
| Conread position: | 1103-1248 |
| Cow position: | chr27:17469566-17469710 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 1103-1289 |
| Cow position: | chr27:9922249-9922059 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 130, 32 |
| Conread position: | 1112-1292 |
| Cow position: | chr27:27582093-27582277 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 106, 12 |
| Conread position: | 1116-1280 |
| Cow position: | chr27:1785437-1785271 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 120, 132 |
| Conread position: | 1131-1288 |
| Cow position: | chr27:18528018-18527857 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 60, 14 |
| Conread position: | 1270-1526 |
| Cow position: | chr27:22245130-22245387 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 43, 89 |
| Conread position: | 1286-1520 |
| Cow position: | chr27:21793784-21793555 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 86, 25 |
| Conread position: | 1288-1518 |
| Cow position: | chr27:23157581-23157345 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 26, 43 |
| Conread position: | 1305-1544 |
| Cow position: | chr27:24248892-24248652 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 8, 45 |
| Conread position: | 1311-1520 |
| Cow position: | chr27:6562179-6561976 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 61, 30 |
| Conread position: | 1345-1519 |
| Cow position: | chr27:20960885-20960713 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 96, 13 |
| Conread position: | 1358-1546 |
| Cow position: | chr27:21279753-21279556 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 20, 90 |
| Conread position: | 1359-1539 |
| Cow position: | chr27:27056451-27056270 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 13, 53 |
| Conread position: | 1383-1527 |
| Cow position: | chr27:6948028-6947881 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 1403-1534 |
| Cow position: | chr27:17049066-17048935 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 16, 122 |
Show alignments to all cow chromosomes.