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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8052C04.5.5
        

               
Conread position:
               
1043-1290
               

               
Cow position:
               
chr3:56375863-56376117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
162, 0
               

               
Conread position:
               
1065-1252
               

               
Cow position:
               
chr3:10055919-10056108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
41, 78
               

               
Conread position:
               
1066-1285
               

               
Cow position:
               
chr3:10854279-10854065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
16, 142
               

               
Conread position:
               
1080-1233
               

               
Cow position:
               
chr3:54119375-54119221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
25, 81
               

               
Conread position:
               
1080-1285
               

               
Cow position:
               
chr3:67625945-67625735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
1081-1236
               

               
Cow position:
               
chr3:24191671-24191513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
23, 110
               

               
Conread position:
               
1081-1252
               

               
Cow position:
               
chr3:8002301-8002129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
21, 47
               

               
Conread position:
               
1081-1284
               

               
Cow position:
               
chr3:64012821-64013025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
23, 56
               

               
Conread position:
               
1081-1288
               

               
Cow position:
               
chr3:764177-764390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
146, 78
               

               
Conread position:
               
1081-1288
               

               
Cow position:
               
chr3:14521053-14521260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
24, 127
               

               
Conread position:
               
1081-1288
               

               
Cow position:
               
chr3:44365787-44365997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
23, 195
               

               
Conread position:
               
1081-1288
               

               
Cow position:
               
chr3:55386950-55387160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
15, 115
               

               
Conread position:
               
1081-1289
               

               
Cow position:
               
chr3:7739441-7739229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
24, 122
               

               
Conread position:
               
1081-1289
               

               
Cow position:
               
chr3:22044154-22043938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
1081-1292
               

               
Cow position:
               
chr3:39991659-39991432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
24, 122
               

               
Conread position:
               
1081-1304
               

               
Cow position:
               
chr3:56914645-56914872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
23, 99
               

               
Conread position:
               
1082-1252
               

               
Cow position:
               
chr3:24795960-24796126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
13, 95
               

               
Conread position:
               
1082-1257
               

               
Cow position:
               
chr3:39225513-39225343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
26, 147
               

               
Conread position:
               
1082-1283
               

               
Cow position:
               
chr3:72058061-72058267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
23, 106
               

               
Conread position:
               
1082-1288
               

               
Cow position:
               
chr3:8987753-8987964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
1082-1288
               

               
Cow position:
               
chr3:33503443-33503244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
23, 60
               

               
Conread position:
               
1082-1288
               

               
Cow position:
               
chr3:41479089-41479301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
1082-1290
               

               
Cow position:
               
chr3:63008172-63007955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
1082-1297
               

               
Cow position:
               
chr3:23230007-23229786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
1082-1545
               

               
Cow position:
               
chr3:15183821-15184270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
16, 193
               

               
Conread position:
               
1084-1274
               

               
Cow position:
               
chr3:70839507-70839696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
20, 63
               

               
Conread position:
               
1085-1231
               

               
Cow position:
               
chr3:33709462-33709608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
15, 5
               

               
Conread position:
               
1085-1236
               

               
Cow position:
               
chr3:53645576-53645424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
16, 146
               

               
Conread position:
               
1085-1252
               

               
Cow position:
               
chr3:73399059-73399227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
20, 57
               

               
Conread position:
               
1085-1257
               

               
Cow position:
               
chr3:68379381-68379554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1085-1285
               

               
Cow position:
               
chr3:56154045-56154249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
20, 44
               

               
Conread position:
               
1085-1288
               

               
Cow position:
               
chr3:11532578-11532785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
19, 95
               

               
Conread position:
               
1085-1288
               

               
Cow position:
               
chr3:16614417-16614619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
20, 98
               

               
Conread position:
               
1085-1288
               

               
Cow position:
               
chr3:32166238-32166451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
20, 58
               

               
Conread position:
               
1085-1288
               

               
Cow position:
               
chr3:42982156-42981949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
16, 131
               

               
Conread position:
               
1085-1288
               

               
Cow position:
               
chr3:63274602-63274800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
20, 95
               

               
Conread position:
               
1085-1288
               

               
Cow position:
               
chr3:81552197-81551988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
1085-1289
               

               
Cow position:
               
chr3:53568566-53568770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
13, 98
               

               
Conread position:
               
1085-1533
               

               
Cow position:
               
chr3:17321513-17321980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
20, 81
               

               
Conread position:
               
1085-1541
               

               
Cow position:
               
chr3:2295488-2295947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
170, 21
               

               
Conread position:
               
1086-1309
               

               
Cow position:
               
chr3:70095388-70095160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
6, 14
               

               
Conread position:
               
1087-1222
               

               
Cow position:
               
chr3:58687019-58686884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
17, 55
               

               
Conread position:
               
1088-1259
               

               
Cow position:
               
chr3:7650755-7650929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
1088-1289
               

               
Cow position:
               
chr3:25264812-25264608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
8, 57
               

               
Conread position:
               
1089-1288
               

               
Cow position:
               
chr3:18595628-18595828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
16, 55
               

               
Conread position:
               
1089-1290
               

               
Cow position:
               
chr3:10932902-10933107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
16, 114
               

               
Conread position:
               
1090-1284
               

               
Cow position:
               
chr3:66859389-66859586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
15, 34
               

               
Conread position:
               
1090-1288
               

               
Cow position:
               
chr3:8190946-8191147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
14, 182
               

               
Conread position:
               
1090-1288
               

               
Cow position:
               
chr3:18394388-18394190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
15, 51
               

               
Conread position:
               
1090-1288
               

               
Cow position:
               
chr3:23921030-23920836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
143, 161
               

               
Conread position:
               
1090-1288
               

               
Cow position:
               
chr3:56576043-56575844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
14, 173
               

               
Conread position:
               
1090-1288
               

               
Cow position:
               
chr3:69055809-69056013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
1090-1290
               

               
Cow position:
               
chr3:54015220-54015013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
15, 99
               

               
Conread position:
               
1090-1512
               

               
Cow position:
               
chr3:16605640-16605196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
7, 150
               

               
Conread position:
               
1091-1257
               

               
Cow position:
               
chr3:67275338-67275169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
14, 31
               

               
Conread position:
               
1091-1285
               

               
Cow position:
               
chr3:35260256-35260448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
168, 49
               

               
Conread position:
               
1091-1288
               

               
Cow position:
               
chr3:8012302-8012505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
1091-1288
               

               
Cow position:
               
chr3:18936910-18937110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
13, 140
               

               
Conread position:
               
1091-1288
               

               
Cow position:
               
chr3:46809042-46809243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
62, 22
               

               
Conread position:
               
1091-1288
               

               
Cow position:
               
chr3:57403195-57402993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
1093-1288
               

               
Cow position:
               
chr3:47519080-47519277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
163, 74
               

               
Conread position:
               
1095-1256
               

               
Cow position:
               
chr3:27579995-27579834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
158, 134
               

               
Conread position:
               
1095-1279
               

               
Cow position:
               
chr3:71229351-71229164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
1095-1288
               

               
Cow position:
               
chr3:43231758-43231953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
45, 62
               

               
Conread position:
               
1095-1290
               

               
Cow position:
               
chr3:59668383-59668577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
13, 134
               

               
Conread position:
               
1096-1224
               

               
Cow position:
               
chr3:1264254-1264381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
1096-1278
               

               
Cow position:
               
chr3:60701476-60701289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
122, 81
               

               
Conread position:
               
1096-1284
               

               
Cow position:
               
chr3:70371091-70370905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
154, 97
               

               
Conread position:
               
1096-1285
               

               
Cow position:
               
chr3:60618241-60618434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
155, 0
               

               
Conread position:
               
1096-1285
               

               
Cow position:
               
chr3:73639341-73639534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
155, 90
               

               
Conread position:
               
1096-1288
               

               
Cow position:
               
chr3:17885300-17885496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
158, 0
               

               
Conread position:
               
1096-1288
               

               
Cow position:
               
chr3:38328253-38328451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
128, 39
               

               
Conread position:
               
1096-1288
               

               
Cow position:
               
chr3:57464609-57464803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
120, 10
               

               
Conread position:
               
1096-1288
               

               
Cow position:
               
chr3:68243490-68243299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
185, 0
               

               
Conread position:
               
1096-1288
               

               
Cow position:
               
chr3:68641229-68641423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
93, 70
               

               
Conread position:
               
1096-1288
               

               
Cow position:
               
chr3:77623983-77624175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
154, 142
               

               
Conread position:
               
1096-1289
               

               
Cow position:
               
chr3:31608504-31608313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
158, 137
               

               
Conread position:
               
1096-1291
               

               
Cow position:
               
chr3:68357757-68357558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
155, 0
               

               
Conread position:
               
1097-1297
               

               
Cow position:
               
chr3:42893718-42893516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
158, 84
               

               
Conread position:
               
1097-1306
               

               
Cow position:
               
chr3:70200647-70200860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
60, 16
               

               
Conread position:
               
1099-1257
               

               
Cow position:
               
chr3:50731329-50731487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
97, 90
               

               
Conread position:
               
1099-1282
               

               
Cow position:
               
chr3:24763692-24763503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
1099-1288
               

               
Cow position:
               
chr3:44421744-44421937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
152, 0
               

               
Conread position:
               
1099-1288
               

               
Cow position:
               
chr3:68682375-68682181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
1099-1288
               

               
Cow position:
               
chr3:69496150-69495960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
155, 175
               

               
Conread position:
               
1099-1288
               

               
Cow position:
               
chr3:70701615-70701808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
154, 0
               

               
Conread position:
               
1100-1288
               

               
Cow position:
               
chr3:20453086-20453270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
151, 72
               

               
Conread position:
               
1101-1272
               

               
Cow position:
               
chr3:49435662-49435491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
154, 71
               

               
Conread position:
               
1102-1289
               

               
Cow position:
               
chr3:4691623-4691815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
143, 79
               

               
Conread position:
               
1103-1234
               

               
Cow position:
               
chr3:37646685-37646816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1103-1257
               

               
Cow position:
               
chr3:32344173-32344016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
48, 32
               

               
Conread position:
               
1103-1288
               

               
Cow position:
               
chr3:18528197-18528384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
112, 75
               

               
Conread position:
               
1103-1288
               

               
Cow position:
               
chr3:80594868-80595052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
151, 72
               

               
Conread position:
               
1103-1289
               

               
Cow position:
               
chr3:22947873-22947684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
120, 19
               

               
Conread position:
               
1103-1290
               

               
Cow position:
               
chr3:51478499-51478673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
1103-1296
               

               
Cow position:
               
chr3:22353766-22353966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
88, 130
               

               
Conread position:
               
1103-1297
               

               
Cow position:
               
chr3:52203529-52203723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
151, 82
               

               
Conread position:
               
1103-1301
               

               
Cow position:
               
chr3:34633-34826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
1103-1302
               

               
Cow position:
               
chr3:74144751-74144547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
150, 48
               

               
Conread position:
               
1104-1288
               

               
Cow position:
               
chr3:40979478-40979665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
90, 81
               

               
Conread position:
               
1104-1290
               

               
Cow position:
               
chr3:4344215-4344406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
1104-1295
               

               
Cow position:
               
chr3:38018077-38017886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
114, 77
               

               
Conread position:
               
1104-1304
               

               
Cow position:
               
chr3:56203114-56202914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
151, 24
               

               
Conread position:
               
1105-1286
               

               
Cow position:
               
chr3:7984315-7984132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
36, 104
               

               
Conread position:
               
1105-1301
               

               
Cow position:
               
chr3:45312676-45312878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
1109-1278
               

               
Cow position:
               
chr3:21263535-21263708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
1109-1288
               

               
Cow position:
               
chr3:44393690-44393874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
1109-1288
               

               
Cow position:
               
chr3:75938642-75938461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
145, 39
               

               
Conread position:
               
1111-1292
               

               
Cow position:
               
chr3:31991891-31991706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
1112-1290
               

               
Cow position:
               
chr3:68680667-68680849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
1113-1296
               

               
Cow position:
               
chr3:71686066-71686248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
71, 78
               

               
Conread position:
               
1117-1288
               

               
Cow position:
               
chr3:55985306-55985481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
1117-1288
               

               
Cow position:
               
chr3:61154113-61154291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
1125-1247
               

               
Cow position:
               
chr3:47686593-47686473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
101, 21
               

               
Conread position:
               
1126-1285
               

               
Cow position:
               
chr3:47680522-47680367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
1130-1295
               

               
Cow position:
               
chr3:31226915-31227078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
1132-1301
               

               
Cow position:
               
chr3:41882610-41882787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
57, 8
               

               
Conread position:
               
1139-1288
               

               
Cow position:
               
chr3:65922533-65922680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
1139-1291
               

               
Cow position:
               
chr3:4080208-4080056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
83, 98
               

               
Conread position:
               
1140-1288
               

               
Cow position:
               
chr3:8044548-8044404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
115, 8
               

               
Conread position:
               
1140-1290
               

               
Cow position:
               
chr3:76901853-76902004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
109, 89
               

               
Conread position:
               
1143-1288
               

               
Cow position:
               
chr3:15743446-15743294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
1157-1288
               

               
Cow position:
               
chr3:44445089-44444958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
39, 22
               

               
Conread position:
               
1259-1540
               

               
Cow position:
               
chr3:22043915-22043636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
55, 18
               

               
Conread position:
               
1271-1467
               

               
Cow position:
               
chr3:31793641-31793443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
43, 88
               

               
Conread position:
               
1271-1516
               

               
Cow position:
               
chr3:52515120-52515364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
42, 33
               

               
Conread position:
               
1271-1520
               

               
Cow position:
               
chr3:80595087-80595333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
43, 36
               

               
Conread position:
               
1271-1525
               

               
Cow position:
               
chr3:74867778-74868040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
43, 81
               

               
Conread position:
               
1271-1533
               

               
Cow position:
               
chr3:63248831-63249085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
43, 94
               

               
Conread position:
               
1271-1535
               

               
Cow position:
               
chr3:76976613-76976880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
93, 75
               

               
Conread position:
               
1271-1542
               

               
Cow position:
               
chr3:70519284-70519019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
43, 33
               

               
Conread position:
               
1271-1544
               

               
Cow position:
               
chr3:50731555-50731828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
43, 52
               

               
Conread position:
               
1271-1545
               

               
Cow position:
               
chr3:40896451-40896722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
43, 93
               

               
Conread position:
               
1272-1521
               

               
Cow position:
               
chr3:25583705-25583465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
42, 5
               

               
Conread position:
               
1283-1526
               

               
Cow position:
               
chr3:36085598-36085355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
118, 28
               

               
Conread position:
               
1286-1541
               

               
Cow position:
               
chr3:61609751-61609501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
28, 47
               

               
Conread position:
               
1288-1507
               

               
Cow position:
               
chr3:18394137-18393921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
26, 38
               

               
Conread position:
               
1288-1535
               

               
Cow position:
               
chr3:10056204-10056438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
26, 54
               

               
Conread position:
               
1288-1535
               

               
Cow position:
               
chr3:49912331-49912579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
25, 61
               

               
Conread position:
               
1288-1536
               

               
Cow position:
               
chr3:8051031-8051270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
84, 23
               

               
Conread position:
               
1288-1536
               

               
Cow position:
               
chr3:76157597-76157838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
26, 75
               

               
Conread position:
               
1288-1538
               

               
Cow position:
               
chr3:61606720-61606963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
26, 18
               

               
Conread position:
               
1288-1539
               

               
Cow position:
               
chr3:76913720-76913982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
26, 46
               

               
Conread position:
               
1288-1541
               

               
Cow position:
               
chr3:72262324-72262575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
26, 64
               

               
Conread position:
               
1288-1544
               

               
Cow position:
               
chr3:8563097-8562848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
26, 55
               

               
Conread position:
               
1288-1544
               

               
Cow position:
               
chr3:68379653-68379918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
1288-1548
               

               
Cow position:
               
chr3:23229742-23229477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
26, 65
               

               
Conread position:
               
1291-1543
               

               
Cow position:
               
chr3:53572419-53572161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
26, 113
               

               
Conread position:
               
1293-1519
               

               
Cow position:
               
chr3:22947631-22947404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
23, 49
               

               
Conread position:
               
1295-1501
               

               
Cow position:
               
chr3:63357320-63357114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
19, 66
               

               
Conread position:
               
1295-1531
               

               
Cow position:
               
chr3:76237001-76237229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
126, 44
               

               
Conread position:
               
1296-1538
               

               
Cow position:
               
chr3:41854572-41854335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
78, 15
               

               
Conread position:
               
1305-1523
               

               
Cow position:
               
chr3:31814715-31814497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
9, 40
               

               
Conread position:
               
1305-1533
               

               
Cow position:
               
chr3:18595898-18596124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
9, 57
               

               
Conread position:
               
1310-1520
               

               
Cow position:
               
chr3:44366070-44366292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
26, 20
               

               
Conread position:
               
1310-1534
               

               
Cow position:
               
chr3:5606523-5606749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
75, 37
               

               
Conread position:
               
1315-1508
               

               
Cow position:
               
chr3:73399336-73399530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
23, 87
               

               
Conread position:
               
1323-1533
               

               
Cow position:
               
chr3:81354341-81354137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
49, 19
               

               
Conread position:
               
1342-1528
               

               
Cow position:
               
chr3:12275887-12276075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
19, 45
               

               
Conread position:
               
1347-1516
               

               
Cow position:
               
chr3:41304340-41304511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
28, 52
               

               
Conread position:
               
1352-1546
               

               
Cow position:
               
chr3:61118825-61119018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
8, 49
               

               
Conread position:
               
1353-1518
               

               
Cow position:
               
chr3:8044307-8044132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
1354-1536
               

               
Cow position:
               
chr3:39940538-39940710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
1356-1512
               

               
Cow position:
               
chr3:11570550-11570709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1357-1540
               

               
Cow position:
               
chr3:15742947-15742767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
15, 81
               

               
Conread position:
               
1358-1533
               

               
Cow position:
               
chr3:27214231-27214406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
14, 77
               

               
Conread position:
               
1358-1541
               

               
Cow position:
               
chr3:65922800-65922983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
14, 126
               

               
Conread position:
               
1358-1543
               

               
Cow position:
               
chr3:11553364-11553549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
14, 22
               

               
Conread position:
               
1359-1518
               

               
Cow position:
               
chr3:71260605-71260446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
15, 93
               

               
Conread position:
               
1359-1531
               

               
Cow position:
               
chr3:39132726-39132562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
15, 44
               

               
Conread position:
               
1359-1540
               

               
Cow position:
               
chr3:70249335-70249155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
117, 25
               

               
Conread position:
               
1359-1548
               

               
Cow position:
               
chr3:18103094-18103284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
13, 30
               

               
Conread position:
               
1360-1543
               

               
Cow position:
               
chr3:39419458-39419642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
12, 102
               

               
Conread position:
               
1360-1543
               

               
Cow position:
               
chr3:77746170-77746350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
12, 56
               

               
Conread position:
               
1366-1535
               

               
Cow position:
               
chr3:42200244-42200411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
24, 34
               

               
Conread position:
               
1369-1545
               

               
Cow position:
               
chr3:57877248-57877422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
5, 30
               

               
Conread position:
               
1371-1541
               

               
Cow position:
               
chr3:71203191-71203354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
1377-1547
               

               
Cow position:
               
chr3:10933221-10933384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
148, 29
               

               
Conread position:
               
1378-1520
               

               
Cow position:
               
chr3:61553296-61553153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
1381-1520
               

               
Cow position:
               
chr3:4781663-4781800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
1382-1537
               

               
Cow position:
               
chr3:31779665-31779821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
12, 144
               

               
Conread position:
               
1384-1544
               

               
Cow position:
               
chr3:69056176-69056339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
1397-1535
               

               
Cow position:
               
chr3:1027792-1027654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
22, 131
               

               
Conread position:
               
1402-1522
               

               
Cow position:
               
chr3:11533279-11533399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
20, 116
               

               
Conread position:
               
1403-1535
               

               
Cow position:
               
chr3:72058707-72058837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
16, 103
               

               
Conread position:
               
1403-1540
               

               
Cow position:
               
chr3:72121651-72121515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
17, 10
               
Show alignments to all cow chromosomes.