Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8052C04.5.5 |
| Conread position: | 1041-1288 |
| Cow position: | chr5:40614399-40614147 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 53, 75 |
| Conread position: | 1076-1294 |
| Cow position: | chr5:64588406-64588619 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 29, 130 |
| Conread position: | 1079-1293 |
| Cow position: | chr5:24912139-24912359 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1080-1285 |
| Cow position: | chr5:28345909-28346117 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 24, 62 |
| Conread position: | 1080-1292 |
| Cow position: | chr5:15795680-15795891 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 24, 33 |
| Conread position: | 1080-1301 |
| Cow position: | chr5:22890448-22890225 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 15, 156 |
| Conread position: | 1081-1280 |
| Cow position: | chr5:48247893-48248096 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 1081-1288 |
| Cow position: | chr5:28677795-28677583 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 16, 197 |
| Conread position: | 1081-1288 |
| Cow position: | chr5:32643302-32643519 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 23, 202 |
| Conread position: | 1081-1288 |
| Cow position: | chr5:35964617-35964824 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 44, 21 |
| Conread position: | 1081-1289 |
| Cow position: | chr5:18479076-18479292 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 23, 94 |
| Conread position: | 1081-1289 |
| Cow position: | chr5:33565593-33565794 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 67, 8 |
| Conread position: | 1081-1292 |
| Cow position: | chr5:19859994-19859778 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 23, 64 |
| Conread position: | 1081-1294 |
| Cow position: | chr5:50648422-50648621 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 27, 68 |
| Conread position: | 1081-1316 |
| Cow position: | chr5:55697367-55697122 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 1081-1538 |
| Cow position: | chr5:56656988-56656493 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 102 |
| Conread position: | 1082-1284 |
| Cow position: | chr5:52907884-52908097 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 1082-1288 |
| Cow position: | chr5:5881097-5880886 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 24, 5 |
| Conread position: | 1082-1288 |
| Cow position: | chr5:41917815-41917608 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 28, 62 |
| Conread position: | 1082-1288 |
| Cow position: | chr5:51074467-51074260 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 17, 169 |
| Conread position: | 1083-1292 |
| Cow position: | chr5:63836318-63836528 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 21, 40 |
| Conread position: | 1085-1231 |
| Cow position: | chr5:60669547-60669693 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 15, 56 |
| Conread position: | 1085-1285 |
| Cow position: | chr5:39195583-39195389 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 23, 70 |
| Conread position: | 1085-1285 |
| Cow position: | chr5:67524278-67524484 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 27, 192 |
| Conread position: | 1085-1288 |
| Cow position: | chr5:19419488-19419282 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 20, 64 |
| Conread position: | 1085-1288 |
| Cow position: | chr5:53555082-53554874 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 20, 80 |
| Conread position: | 1085-1288 |
| Cow position: | chr5:61995245-61995456 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 1086-1288 |
| Cow position: | chr5:62178167-62178371 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 168, 32 |
| Conread position: | 1088-1285 |
| Cow position: | chr5:65052508-65052316 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 6, 113 |
| Conread position: | 1088-1288 |
| Cow position: | chr5:57892337-57892544 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 6, 81 |
| Conread position: | 1090-1280 |
| Cow position: | chr5:69169477-69169284 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 169, 100 |
| Conread position: | 1090-1288 |
| Cow position: | chr5:28931030-28931232 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 15, 72 |
| Conread position: | 1090-1288 |
| Cow position: | chr5:31008232-31008427 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 11, 41 |
| Conread position: | 1090-1288 |
| Cow position: | chr5:49691939-49692141 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 14, 140 |
| Conread position: | 1090-1288 |
| Cow position: | chr5:67598355-67598558 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 1090-1288 |
| Cow position: | chr5:70631320-70631117 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 14, 142 |
| Conread position: | 1090-1292 |
| Cow position: | chr5:5272094-5272299 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 20, 113 |
| Conread position: | 1090-1292 |
| Cow position: | chr5:33251107-33250904 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 163, 21 |
| Conread position: | 1091-1288 |
| Cow position: | chr5:63631538-63631745 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 1091-1289 |
| Cow position: | chr5:68365004-68364803 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 14, 81 |
| Conread position: | 1091-1302 |
| Cow position: | chr5:3079915-3080123 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 162, 114 |
| Conread position: | 1091-1319 |
| Cow position: | chr5:40673043-40673272 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 13, 116 |
| Conread position: | 1092-1288 |
| Cow position: | chr5:70093878-70094080 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 5, 155 |
| Conread position: | 1093-1252 |
| Cow position: | chr5:20650640-20650481 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 62, 153 |
| Conread position: | 1096-1252 |
| Cow position: | chr5:43359227-43359079 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 123 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 1096-1259 |
| Cow position: | chr5:27201171-27201007 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 1096-1284 |
| Cow position: | chr5:37402801-37402996 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 67, 93 |
| Conread position: | 1096-1285 |
| Cow position: | chr5:33962738-33962930 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 158, 133 |
| Conread position: | 1096-1288 |
| Cow position: | chr5:24539282-24539089 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 145, 57 |
| Conread position: | 1096-1288 |
| Cow position: | chr5:33189893-33190088 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 153, 68 |
| Conread position: | 1096-1289 |
| Cow position: | chr5:44359570-44359760 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 28, 106 |
| Conread position: | 1096-1290 |
| Cow position: | chr5:48244747-48244944 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 157, 71 |
| Conread position: | 1096-1296 |
| Cow position: | chr5:28650912-28651115 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 157, 15 |
| Conread position: | 1097-1288 |
| Cow position: | chr5:62272386-62272197 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 158, 117 |
| Conread position: | 1099-1244 |
| Cow position: | chr5:38159033-38159178 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 8, 134 |
| Conread position: | 1099-1271 |
| Cow position: | chr5:67117641-67117817 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 155, 0 |
| Conread position: | 1099-1285 |
| Cow position: | chr5:44437618-44437432 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 154, 95 |
| Conread position: | 1099-1297 |
| Cow position: | chr5:62268251-62268455 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 1100-1284 |
| Cow position: | chr5:52645412-52645220 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 1100-1287 |
| Cow position: | chr5:26096964-26097154 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 5, 151 |
| Conread position: | 1101-1288 |
| Cow position: | chr5:34915810-34916001 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 44, 150 |
| Conread position: | 1102-1284 |
| Cow position: | chr5:31103971-31104158 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 1102-1285 |
| Cow position: | chr5:66859636-66859449 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 118, 137 |
| Conread position: | 1102-1288 |
| Cow position: | chr5:45602083-45601894 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 147, 92 |
| Conread position: | 1102-1288 |
| Cow position: | chr5:70339468-70339655 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 151, 43 |
| Conread position: | 1102-1290 |
| Cow position: | chr5:45833758-45833566 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 89, 166 |
| Conread position: | 1103-1232 |
| Cow position: | chr5:17027769-17027899 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 1103-1288 |
| Cow position: | chr5:5662796-5662609 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 116, 141 |
| Conread position: | 1103-1288 |
| Cow position: | chr5:27899441-27899253 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 37, 121 |
| Conread position: | 1103-1288 |
| Cow position: | chr5:29903851-29903663 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 126, 148 |
| Conread position: | 1103-1288 |
| Cow position: | chr5:60284983-60285173 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 1103-1288 |
| Cow position: | chr5:60929960-60929770 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 1103-1292 |
| Cow position: | chr5:41201395-41201219 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 88, 121 |
| Conread position: | 1103-1297 |
| Cow position: | chr5:47244016-47244213 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 156, 111 |
| Conread position: | 1103-1309 |
| Cow position: | chr5:45846022-45845814 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 128, 92 |
| Conread position: | 1104-1234 |
| Cow position: | chr5:45999349-45999219 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1104-1286 |
| Cow position: | chr5:66971343-66971525 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 143, 77 |
| Conread position: | 1104-1288 |
| Cow position: | chr5:48113043-48113228 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 153, 87 |
| Conread position: | 1104-1295 |
| Cow position: | chr5:27100954-27101151 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 147, 0 |
| Conread position: | 1105-1285 |
| Cow position: | chr5:35320325-35320145 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 146, 127 |
| Conread position: | 1105-1289 |
| Cow position: | chr5:42344974-42344787 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 148, 165 |
| Conread position: | 1106-1225 |
| Cow position: | chr5:6738316-6738199 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 94 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 1106-1288 |
| Cow position: | chr5:24925507-24925692 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 147, 63 |
| Conread position: | 1106-1288 |
| Cow position: | chr5:35339121-35339304 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 145, 61 |
| Conread position: | 1106-1288 |
| Cow position: | chr5:48430015-48429830 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 26, 37 |
| Conread position: | 1106-1290 |
| Cow position: | chr5:21184652-21184464 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 147, 0 |
| Conread position: | 1107-1288 |
| Cow position: | chr5:16043731-16043911 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 66, 48 |
| Conread position: | 1109-1302 |
| Cow position: | chr5:14668603-14668800 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 143, 114 |
| Conread position: | 1110-1236 |
| Cow position: | chr5:29600134-29600260 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1110-1283 |
| Cow position: | chr5:61988978-61988797 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 81, 13 |
| Conread position: | 1111-1285 |
| Cow position: | chr5:32978734-32978557 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 141, 117 |
| Conread position: | 1111-1288 |
| Cow position: | chr5:41019873-41019687 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 1111-1288 |
| Cow position: | chr5:41517600-41517421 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 140, 20 |
| Conread position: | 1113-1288 |
| Cow position: | chr5:8769721-8769901 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 112, 32 |
| Conread position: | 1113-1536 |
| Cow position: | chr5:76414593-76415026 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 272 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 1113-1540 |
| Cow position: | chr5:5062990-5063406 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 278 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 113, 13 |
| Conread position: | 1114-1256 |
| Cow position: | chr5:12176207-12176062 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 25, 12 |
| Conread position: | 1117-1288 |
| Cow position: | chr5:33150388-33150558 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 134, 64 |
| Conread position: | 1118-1283 |
| Cow position: | chr5:58579344-58579173 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 1120-1296 |
| Cow position: | chr5:53148553-53148381 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 1122-1288 |
| Cow position: | chr5:6946074-6945912 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 1131-1294 |
| Cow position: | chr5:47725141-47725303 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 120, 101 |
| Conread position: | 1151-1282 |
| Cow position: | chr5:51967307-51967178 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 1152-1289 |
| Cow position: | chr5:67785511-67785369 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 76, 120 |
| Conread position: | 1198-1520 |
| Cow position: | chr5:48062417-48062103 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 117, 42 |
| Conread position: | 1232-1535 |
| Cow position: | chr5:63836513-63836826 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 213 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 17, 38 |
| Conread position: | 1239-1520 |
| Cow position: | chr5:20383516-20383793 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 12, 52 |
| Conread position: | 1249-1544 |
| Cow position: | chr5:45601877-45601594 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 214 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 65, 28 |
| Conread position: | 1266-1534 |
| Cow position: | chr5:48547081-48547351 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 36, 12 |
| Conread position: | 1268-1528 |
| Cow position: | chr5:70945191-70944932 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 104, 27 |
| Conread position: | 1271-1515 |
| Cow position: | chr5:62332832-62333072 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 43, 33 |
| Conread position: | 1271-1540 |
| Cow position: | chr5:16959558-16959296 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 42, 55 |
| Conread position: | 1272-1538 |
| Cow position: | chr5:62205357-62205627 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 42, 153 |
| Conread position: | 1273-1520 |
| Cow position: | chr5:62341804-62342049 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 43, 90 |
| Conread position: | 1273-1537 |
| Cow position: | chr5:3467062-3466798 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 41, 61 |
| Conread position: | 1287-1519 |
| Cow position: | chr5:63631804-63632030 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 27, 58 |
| Conread position: | 1287-1532 |
| Cow position: | chr5:68887257-68887499 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 27, 66 |
| Conread position: | 1288-1506 |
| Cow position: | chr5:41201170-41200957 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 26, 58 |
| Conread position: | 1288-1520 |
| Cow position: | chr5:72010360-72010581 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 26, 43 |
| Conread position: | 1288-1526 |
| Cow position: | chr5:27534448-27534209 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 23, 77 |
| Conread position: | 1288-1528 |
| Cow position: | chr5:62385175-62385432 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 26, 120 |
| Conread position: | 1288-1535 |
| Cow position: | chr5:62446621-62446374 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 76, 26 |
| Conread position: | 1288-1539 |
| Cow position: | chr5:45604776-45605026 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 25, 112 |
| Conread position: | 1288-1547 |
| Cow position: | chr5:5880832-5880585 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 27, 44 |
| Conread position: | 1291-1519 |
| Cow position: | chr5:19859730-19859503 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 24, 73 |
| Conread position: | 1295-1515 |
| Cow position: | chr5:66575205-66575427 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 19, 54 |
| Conread position: | 1295-1533 |
| Cow position: | chr5:67539780-67539544 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 19, 45 |
| Conread position: | 1295-1541 |
| Cow position: | chr5:49927259-49927505 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 19, 51 |
| Conread position: | 1295-1547 |
| Cow position: | chr5:62544170-62544423 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 19, 79 |
| Conread position: | 1307-1512 |
| Cow position: | chr5:67094596-67094390 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 33, 86 |
| Conread position: | 1311-1516 |
| Cow position: | chr5:33550948-33551154 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 43, 21 |
| Conread position: | 1311-1543 |
| Cow position: | chr5:52908171-52908407 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 10, 207 |
| Conread position: | 1311-1545 |
| Cow position: | chr5:53360324-53360096 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 61, 38 |
| Conread position: | 1342-1542 |
| Cow position: | chr5:18479392-18479590 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 39, 27 |
| Conread position: | 1351-1519 |
| Cow position: | chr5:24527023-24526855 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 17, 75 |
| Conread position: | 1352-1540 |
| Cow position: | chr5:51725004-51725196 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 46, 96 |
| Conread position: | 1357-1522 |
| Cow position: | chr5:26225066-26224901 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 39, 44 |
| Conread position: | 1358-1528 |
| Cow position: | chr5:34951156-34951326 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 15, 84 |
| Conread position: | 1358-1538 |
| Cow position: | chr5:20582753-20582929 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 14, 56 |
| Conread position: | 1358-1540 |
| Cow position: | chr5:35577745-35577570 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 138 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 1358-1545 |
| Cow position: | chr5:75008104-75007916 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 14, 85 |
| Conread position: | 1361-1533 |
| Cow position: | chr5:70840066-70840238 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 11, 48 |
| Conread position: | 1369-1511 |
| Cow position: | chr5:12175492-12175350 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 51, 5 |
| Conread position: | 1371-1520 |
| Cow position: | chr5:26241688-26241543 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 48, 102 |
| Conread position: | 1371-1528 |
| Cow position: | chr5:34841521-34841365 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 49, 113 |
| Conread position: | 1371-1537 |
| Cow position: | chr5:54963091-54962927 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 1371-1548 |
| Cow position: | chr5:27899128-27898949 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 1372-1527 |
| Cow position: | chr5:6253155-6253309 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 48, 39 |
| Conread position: | 1372-1548 |
| Cow position: | chr5:48188620-48188446 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 47, 53 |
| Conread position: | 1374-1518 |
| Cow position: | chr5:66954755-66954607 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1375-1536 |
| Cow position: | chr5:70604242-70604402 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 43, 9 |
| Conread position: | 1375-1548 |
| Cow position: | chr5:42101612-42101444 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 1377-1546 |
| Cow position: | chr5:6737419-6737248 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 8, 31 |
| Conread position: | 1380-1544 |
| Cow position: | chr5:35339439-35339606 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 39, 66 |
| Conread position: | 1385-1523 |
| Cow position: | chr5:55696965-55696828 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 1388-1516 |
| Cow position: | chr5:74671982-74671853 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 32, 10 |
| Conread position: | 1388-1536 |
| Cow position: | chr5:47490566-47490421 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 31, 10 |
| Conread position: | 1402-1546 |
| Cow position: | chr5:3063593-3063449 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 17, 69 |
| Conread position: | 1403-1515 |
| Cow position: | chr5:67524637-67524750 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 91 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 1403-1534 |
| Cow position: | chr5:29930487-29930356 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 105 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 16, 59 |
| Conread position: | 1410-1532 |
| Cow position: | chr5:69693720-69693844 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 1411-1541 |
| Cow position: | chr5:44531301-44531170 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 8, 0 |
Show alignments to all cow chromosomes.