Cow genome map

Conread name: Ss1.1-Pig4-TMW8052C04.5.5

Conread position: 1077-1288
Cow position: chr6:47457484-47457701 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 156
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 27, 113

Conread position: 1078-1288
Cow position: chr6:15968297-15968083 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 151
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 26, 106

Conread position: 1081-1214
Cow position: chr6:16276548-16276683 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 112
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 23, 0

Conread position: 1081-1284
Cow position: chr6:3449667-3449460 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 149
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 24, 55

Conread position: 1081-1288
Cow position: chr6:6999062-6999270 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 146
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 23, 82

Conread position: 1081-1288
Cow position: chr6:19429128-19429337 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 151
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 16, 194

Conread position: 1081-1292
Cow position: chr6:19841961-19841744 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 161
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 15, 150

Conread position: 1081-1292
Cow position: chr6:66975012-66975230 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 150
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 1081-1294
Cow position: chr6:24044742-24044524 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 150
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 23, 0

Conread position: 1081-1512
Cow position: chr6:15933191-15932761 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 297
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 19, 8

Conread position: 1082-1281
Cow position: chr6:31769822-31769613 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 158
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 22, 7

Conread position: 1082-1286
Cow position: chr6:10683668-10683877 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 148
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 22, 5

Conread position: 1082-1288
Cow position: chr6:17887219-17887009 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 150
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 22, 7

Conread position: 1082-1288
Cow position: chr6:20029404-20029197 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 152
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 22, 38

Conread position: 1082-1288
Cow position: chr6:39417000-39417201 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 157
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 173, 24

Conread position: 1082-1297
Cow position: chr6:35186994-35187212 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 153
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 16, 88

Conread position: 1083-1228
Cow position: chr6:21280928-21281074 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 109
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 1083-1250
Cow position: chr6:17073650-17073481 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 21, 59

Conread position: 1083-1289
Cow position: chr6:41868150-41867947 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 153
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 22, 6

Conread position: 1084-1290
Cow position: chr6:20269533-20269321 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 150
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 160, 61

Conread position: 1084-1290
Cow position: chr6:34924430-34924227 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 150
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 169, 42

Conread position: 1085-1286
Cow position: chr6:45648587-45648393 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 143
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 16, 20

Conread position: 1085-1288
Cow position: chr6:7794679-7794885 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 156
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 20, 183

Conread position: 1085-1288
Cow position: chr6:16430755-16430548 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 154
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 166, 0

Conread position: 1085-1288
Cow position: chr6:48107696-48107904 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 152
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 19, 70

Conread position: 1088-1284
Cow position: chr6:32342978-32342791 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 9, 85

Conread position: 1088-1288
Cow position: chr6:16257538-16257737 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 151
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 163, 52

Conread position: 1089-1288
Cow position: chr6:22746327-22746528 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 150
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 9, 74

Conread position: 1090-1257
Cow position: chr6:47317585-47317752 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 7, 53

Conread position: 1090-1273
Cow position: chr6:58731498-58731690 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 144
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 15, 139

Conread position: 1090-1288
Cow position: chr6:12977490-12977689 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 142
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 14, 119

Conread position: 1090-1288
Cow position: chr6:41317373-41317176 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 145
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 20, 27

Conread position: 1090-1288
Cow position: chr6:42693034-42693237 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 146
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 7, 135

Conread position: 1090-1289
Cow position: chr6:32461896-32461691 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 160
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 14, 0

Conread position: 1090-1547
Cow position: chr6:17757714-17758166 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 297
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 14, 93

Conread position: 1091-1283
Cow position: chr6:12578251-12578438 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 133
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 170, 0

Conread position: 1091-1288
Cow position: chr6:51049601-51049804 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 148
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 13, 51

Conread position: 1093-1289
Cow position: chr6:18146666-18146468 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 138
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 158, 12

Conread position: 1095-1285
Cow position: chr6:35180661-35180464 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 139
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 1096-1284
Cow position: chr6:39301140-39300951 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 138
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 155, 38

Conread position: 1096-1288
Cow position: chr6:1908666-1908469 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 137
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 157, 0

Conread position: 1096-1288
Cow position: chr6:38778295-38778099 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 135
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 158, 0

Conread position: 1096-1288
Cow position: chr6:51370783-51370973 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 154
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 158, 33

Conread position: 1096-1288
Cow position: chr6:62828471-62828284 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 155, 44

Conread position: 1096-1290
Cow position: chr6:33176920-33176726 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 157, 117

Conread position: 1096-1290
Cow position: chr6:67242936-67242742 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 141
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 36, 45

Conread position: 1096-1427
Cow position: chr6:60851321-60850982 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 230
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 162, 68

Conread position: 1096-1533
Cow position: chr6:7155469-7155037 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 93

Conread position: 1097-1286
Cow position: chr6:30491306-30491110 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 142
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 153, 90

Conread position: 1098-1292
Cow position: chr6:60936056-60936249 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 139
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 68, 111

Conread position: 1102-1283
Cow position: chr6:55573423-55573238 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 147, 0

Conread position: 1102-1284
Cow position: chr6:54872351-54872170 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 133
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 152, 132

Conread position: 1102-1285
Cow position: chr6:31532228-31532042 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 152, 62

Conread position: 1102-1288
Cow position: chr6:41216079-41216268 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 134
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 136, 0

Conread position: 1103-1285
Cow position: chr6:54806908-54807094 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 132
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 138, 149

Conread position: 1103-1288
Cow position: chr6:47441085-47440899 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 143, 63

Conread position: 1103-1308
Cow position: chr6:29772104-29772311 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 152
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 152, 113

Conread position: 1103-1309
Cow position: chr6:35842346-35842552 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 144
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 122, 135

Conread position: 1104-1284
Cow position: chr6:12337671-12337854 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 127
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 127, 0

Conread position: 1104-1288
Cow position: chr6:60344045-60344231 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 51, 165

Conread position: 1104-1296
Cow position: chr6:35274781-35274585 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 124, 101

Conread position: 1104-1297
Cow position: chr6:52002056-52002252 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 136
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 133, 77

Conread position: 1104-1324
Cow position: chr6:18979538-18979765 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 161
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 149, 44

Conread position: 1106-1284
Cow position: chr6:10426119-10426300 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 129
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 151, 99

Conread position: 1106-1285
Cow position: chr6:36603857-36604035 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 103, 138

Conread position: 1106-1297
Cow position: chr6:18572618-18572802 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 139
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 181, 60

Conread position: 1111-1288
Cow position: chr6:52010020-52010197 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 130
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 147, 110

Conread position: 1113-1288
Cow position: chr6:7128169-7127997 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 154, 54

Conread position: 1119-1288
Cow position: chr6:32497652-32497821 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 132, 57

Conread position: 1127-1288
Cow position: chr6:47640091-47639926 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 124, 0

Conread position: 1247-1520
Cow position: chr6:13323269-13322996 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 192
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 89, 22

Conread position: 1250-1546
Cow position: chr6:38596740-38597027 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 207
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 89, 27

Conread position: 1265-1544
Cow position: chr6:48419850-48419568 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 201
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 48, 102

Conread position: 1271-1502
Cow position: chr6:35205697-35205474 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 164
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 39, 89

Conread position: 1271-1520
Cow position: chr6:7794919-7795166 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 172
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 46, 87

Conread position: 1271-1544
Cow position: chr6:20517293-20517559 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 187
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 43, 95

Conread position: 1283-1520
Cow position: chr6:11831869-11832106 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 160
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 33, 60

Conread position: 1286-1536
Cow position: chr6:31530947-31531199 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 184
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 28, 90

Conread position: 1286-1548
Cow position: chr6:65829106-65828839 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 180
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 28, 57

Conread position: 1288-1519
Cow position: chr6:17692734-17692504 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 23, 56

Conread position: 1288-1519
Cow position: chr6:67552018-67551786 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 167
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 17, 59

Conread position: 1288-1531
Cow position: chr6:16257790-16258037 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 177
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 30, 70

Conread position: 1288-1533
Cow position: chr6:20029144-20028894 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 170
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 28, 43

Conread position: 1288-1533
Cow position: chr6:53100963-53101208 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 178
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 28, 63

Conread position: 1288-1548
Cow position: chr6:24044476-24044205 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 187
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 26, 114

Conread position: 1291-1519
Cow position: chr6:50177966-50177728 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 175
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 19, 120

Conread position: 1291-1544
Cow position: chr6:64125063-64124817 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 177
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 9, 50

Conread position: 1292-1522
Cow position: chr6:65386294-65386059 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 165
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 119, 49

Conread position: 1296-1519
Cow position: chr6:16278238-16278456 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 160
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 12, 75

Conread position: 1323-1518
Cow position: chr6:60936331-60936520 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 32, 47

Conread position: 1335-1542
Cow position: chr6:31654161-31653961 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 149
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 27, 11

Conread position: 1348-1548
Cow position: chr6:16379336-16379132 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 148
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 30, 16

Conread position: 1360-1545
Cow position: chr6:38610489-38610669 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 133
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 12, 61

Conread position: 1371-1513
Cow position: chr6:13349180-13349324 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 116
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 49, 0

Conread position: 1372-1510
Cow position: chr6:16430393-16430251 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 25, 0

Conread position: 1373-1537
Cow position: chr6:37447857-37447695 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 130
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 48, 72

Conread position: 1375-1527
Cow position: chr6:66975366-66975521 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 15, 0

Conread position: 1377-1534
Cow position: chr6:51371134-51371290 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 113
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 149, 0

Conread position: 1381-1533
Cow position: chr6:22626563-22626412 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 39, 66

Conread position: 1381-1535
Cow position: chr6:40168221-40168374 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 37, 64

Conread position: 1384-1540
Cow position: chr6:11788012-11788167 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 37, 78

Conread position: 1404-1520
Cow position: chr6:30791599-30791485 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 15, 42

Show alignments to all cow chromosomes.