Cow genome map

Conread name: Ss1.1-Pig4-TMW8052C04.5.5

Conread position: 1063-1292
Cow position:
Alignm length: 237
Alignm identity: 171
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 40, 18

Conread position: 1079-1257
Cow position:
Alignm length: 181
Alignm identity: 134
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 26, 8

Conread position: 1079-1288
Cow position:
Alignm length: 219
Alignm identity: 162
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 19, 107

Conread position: 1081-1250
Cow position:
Alignm length: 172
Alignm identity: 124
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 23, 13

Conread position: 1081-1279
Cow position:
Alignm length: 205
Alignm identity: 153
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 23, 8

Conread position: 1081-1288
Cow position:
Alignm length: 215
Alignm identity: 159
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 24, 160

Conread position: 1081-1288
Cow position:
Alignm length: 224
Alignm identity: 158
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 15, 154

Conread position: 1081-1288
Cow position:
Alignm length: 218
Alignm identity: 154
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 24, 127

Conread position: 1081-1290
Cow position:
Alignm length: 217
Alignm identity: 150
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 26, 64

Conread position: 1081-1290
Cow position:
Alignm length: 213
Alignm identity: 152
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 25, 53

Conread position: 1081-1292
Cow position:
Alignm length: 219
Alignm identity: 151
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 23, 0

Conread position: 1081-1519
Cow position:
Alignm length: 464
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 55

Conread position: 1081-1531
Cow position:
Alignm length: 464
Alignm identity: 311
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 23, 66

Conread position: 1082-1288
Cow position:
Alignm length: 213
Alignm identity: 157
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 22, 5

Conread position: 1082-1288
Cow position:
Alignm length: 214
Alignm identity: 156
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 23, 112

Conread position: 1082-1288
Cow position:
Alignm length: 212
Alignm identity: 148
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 15, 151

Conread position: 1083-1285
Cow position:
Alignm length: 207
Alignm identity: 150
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 171, 46

Conread position: 1083-1301
Cow position:
Alignm length: 222
Alignm identity: 150
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 155, 18

Conread position: 1084-1288
Cow position:
Alignm length: 211
Alignm identity: 149
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 11, 66

Conread position: 1084-1309
Cow position:
Alignm length: 232
Alignm identity: 160
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 140, 151

Conread position: 1084-1451
Cow position:
Alignm length: 380
Alignm identity: 253
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 13, 233

Conread position: 1085-1257
Cow position:
Alignm length: 178
Alignm identity: 128
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 19, 0

Conread position: 1085-1279
Cow position:
Alignm length: 202
Alignm identity: 143
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 20, 148

Conread position: 1085-1286
Cow position:
Alignm length: 209
Alignm identity: 144
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 19, 77

Conread position: 1085-1288
Cow position:
Alignm length: 209
Alignm identity: 142
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 13, 87

Conread position: 1085-1288
Cow position:
Alignm length: 204
Alignm identity: 154
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 1085-1288
Cow position:
Alignm length: 210
Alignm identity: 145
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 20, 0

Conread position: 1085-1308
Cow position:
Alignm length: 234
Alignm identity: 162
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 21, 30

Conread position: 1085-1548
Cow position:
Alignm length: 487
Alignm identity: 325
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 106, 37

Conread position: 1086-1288
Cow position:
Alignm length: 204
Alignm identity: 142
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 169, 97

Conread position: 1087-1288
Cow position:
Alignm length: 209
Alignm identity: 158
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 12, 101

Conread position: 1090-1259
Cow position:
Alignm length: 172
Alignm identity: 128
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 7, 102

Conread position: 1090-1284
Cow position:
Alignm length: 204
Alignm identity: 150
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 14, 78

Conread position: 1090-1287
Cow position:
Alignm length: 204
Alignm identity: 149
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 8, 0

Conread position: 1090-1288
Cow position:
Alignm length: 202
Alignm identity: 143
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 15, 41

Conread position: 1090-1288
Cow position:
Alignm length: 205
Alignm identity: 141
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 21, 93

Conread position: 1090-1288
Cow position:
Alignm length: 205
Alignm identity: 151
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 16, 51

Conread position: 1090-1288
Cow position:
Alignm length: 205
Alignm identity: 147
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 17, 59

Conread position: 1090-1292
Cow position:
Alignm length: 210
Alignm identity: 150
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 15, 52

Conread position: 1091-1285
Cow position:
Alignm length: 201
Alignm identity: 143
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 14, 53

Conread position: 1092-1289
Cow position:
Alignm length: 203
Alignm identity: 153
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 13, 0

Conread position: 1096-1252
Cow position:
Alignm length: 158
Alignm identity: 112
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 95, 0

Conread position: 1096-1282
Cow position:
Alignm length: 193
Alignm identity: 138
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 62, 71

Conread position: 1096-1285
Cow position:
Alignm length: 192
Alignm identity: 144
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 122, 24

Conread position: 1096-1285
Cow position:
Alignm length: 194
Alignm identity: 139
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 155, 0

Conread position: 1096-1288
Cow position:
Alignm length: 197
Alignm identity: 143
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 156, 0

Conread position: 1096-1288
Cow position:
Alignm length: 197
Alignm identity: 138
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 157, 108

Conread position: 1096-1304
Cow position:
Alignm length: 227
Alignm identity: 166
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 21, 143

Conread position: 1097-1539
Cow position:
Alignm length: 462
Alignm identity: 297
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 55, 293

Conread position: 1098-1258
Cow position:
Alignm length: 167
Alignm identity: 130
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 90, 0

Conread position: 1098-1288
Cow position:
Alignm length: 192
Alignm identity: 137
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 163, 33

Conread position: 1099-1264
Cow position:
Alignm length: 167
Alignm identity: 120
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 156, 139

Conread position: 1099-1289
Cow position:
Alignm length: 197
Alignm identity: 144
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 41, 36

Conread position: 1100-1294
Cow position:
Alignm length: 205
Alignm identity: 149
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 79, 70

Conread position: 1102-1270
Cow position:
Alignm length: 173
Alignm identity: 130
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 149, 9

Conread position: 1102-1275
Cow position:
Alignm length: 178
Alignm identity: 128
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 151, 103

Conread position: 1102-1284
Cow position:
Alignm length: 190
Alignm identity: 140
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 51, 88

Conread position: 1102-1285
Cow position:
Alignm length: 185
Alignm identity: 130
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 153, 127

Conread position: 1103-1253
Cow position:
Alignm length: 153
Alignm identity: 115
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 144, 129

Conread position: 1103-1284
Cow position:
Alignm length: 191
Alignm identity: 137
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 115, 48

Conread position: 1103-1284
Cow position:
Alignm length: 186
Alignm identity: 129
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 126, 147

Conread position: 1103-1285
Cow position:
Alignm length: 187
Alignm identity: 130
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 148, 15

Conread position: 1103-1288
Cow position:
Alignm length: 190
Alignm identity: 130
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 144, 0

Conread position: 1103-1289
Cow position:
Alignm length: 192
Alignm identity: 134
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 148, 78

Conread position: 1103-1289
Cow position:
Alignm length: 194
Alignm identity: 138
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 146, 101

Conread position: 1103-1289
Cow position:
Alignm length: 191
Alignm identity: 144
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 151, 167

Conread position: 1103-1290
Cow position:
Alignm length: 192
Alignm identity: 148
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 150, 166

Conread position: 1103-1297
Cow position:
Alignm length: 199
Alignm identity: 141
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 146, 35

Conread position: 1103-1308
Cow position:
Alignm length: 210
Alignm identity: 146
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 148, 44

Conread position: 1103-1309
Cow position:
Alignm length: 214
Alignm identity: 146
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 127, 142

Conread position: 1104-1284
Cow position:
Alignm length: 186
Alignm identity: 133
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 90, 85

Conread position: 1104-1288
Cow position:
Alignm length: 190
Alignm identity: 137
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 114, 0

Conread position: 1104-1308
Cow position:
Alignm length: 206
Alignm identity: 141
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 154, 180

Conread position: 1106-1285
Cow position:
Alignm length: 190
Alignm identity: 140
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 7, 30

Conread position: 1106-1288
Cow position:
Alignm length: 186
Alignm identity: 135
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 148, 48

Conread position: 1107-1257
Cow position:
Alignm length: 151
Alignm identity: 112
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1107-1284
Cow position:
Alignm length: 178
Alignm identity: 123
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1108-1274
Cow position:
Alignm length: 172
Alignm identity: 132
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 69, 36

Conread position: 1109-1288
Cow position:
Alignm length: 183
Alignm identity: 131
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 149, 0

Conread position: 1113-1288
Cow position:
Alignm length: 183
Alignm identity: 135
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 64, 164

Conread position: 1114-1275
Cow position:
Alignm length: 166
Alignm identity: 123
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 92, 40

Conread position: 1117-1257
Cow position:
Alignm length: 141
Alignm identity: 109
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 101, 0

Conread position: 1120-1288
Cow position:
Alignm length: 171
Alignm identity: 125
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 96, 102

Conread position: 1122-1285
Cow position:
Alignm length: 164
Alignm identity: 124
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 139, 0

Conread position: 1122-1317
Cow position:
Alignm length: 200
Alignm identity: 137
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 129, 0

Conread position: 1136-1292
Cow position:
Alignm length: 159
Alignm identity: 116
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 92, 102

Conread position: 1141-1302
Cow position:
Alignm length: 167
Alignm identity: 123
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 69, 64

Conread position: 1156-1288
Cow position:
Alignm length: 137
Alignm identity: 104
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 95, 0

Conread position: 1181-1533
Cow position:
Alignm length: 363
Alignm identity: 233
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 68, 57

Conread position: 1265-1519
Cow position:
Alignm length: 258
Alignm identity: 174
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 49, 98

Conread position: 1271-1496
Cow position:
Alignm length: 228
Alignm identity: 156
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 149, 39

Conread position: 1271-1519
Cow position:
Alignm length: 253
Alignm identity: 170
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 43, 75

Conread position: 1271-1520
Cow position:
Alignm length: 252
Alignm identity: 176
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 43, 63

Conread position: 1271-1527
Cow position:
Alignm length: 262
Alignm identity: 174
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 39, 93

Conread position: 1288-1523
Cow position:
Alignm length: 242
Alignm identity: 167
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 25, 67

Conread position: 1288-1528
Cow position:
Alignm length: 244
Alignm identity: 174
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 25, 58

Conread position: 1288-1542
Cow position:
Alignm length: 257
Alignm identity: 180
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 26, 86

Conread position: 1288-1548
Cow position:
Alignm length: 263
Alignm identity: 176
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 27, 70

Conread position: 1289-1517
Cow position:
Alignm length: 234
Alignm identity: 173
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 27, 58

Conread position: 1291-1547
Cow position:
Alignm length: 268
Alignm identity: 196
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 19, 120

Conread position: 1295-1511
Cow position:
Alignm length: 219
Alignm identity: 157
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 19, 45

Conread position: 1299-1487
Cow position:
Alignm length: 190
Alignm identity: 136
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 11, 64

Conread position: 1310-1540
Cow position:
Alignm length: 232
Alignm identity: 162
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 62, 29

Conread position: 1311-1523
Cow position:
Alignm length: 219
Alignm identity: 157
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 61, 47

Conread position: 1312-1544
Cow position:
Alignm length: 241
Alignm identity: 166
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 80, 29

Conread position: 1333-1548
Cow position:
Alignm length: 227
Alignm identity: 161
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 9, 49

Conread position: 1342-1546
Cow position:
Alignm length: 209
Alignm identity: 156
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 32, 15

Conread position: 1348-1535
Cow position:
Alignm length: 191
Alignm identity: 138
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 11, 53

Conread position: 1353-1519
Cow position:
Alignm length: 168
Alignm identity: 126
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 19, 0

Conread position: 1359-1541
Cow position:
Alignm length: 187
Alignm identity: 130
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 1360-1512
Cow position:
Alignm length: 161
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 1360-1534
Cow position:
Alignm length: 177
Alignm identity: 131
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 158, 79

Conread position: 1363-1528
Cow position:
Alignm length: 171
Alignm identity: 125
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 1369-1520
Cow position:
Alignm length: 152
Alignm identity: 114
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 1371-1512
Cow position:
Alignm length: 144
Alignm identity: 109
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 51, 0

Conread position: 1371-1546
Cow position:
Alignm length: 177
Alignm identity: 137
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 48, 35

Conread position: 1384-1534
Cow position:
Alignm length: 153
Alignm identity: 114
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 36, 14

Conread position: 1387-1541
Cow position:
Alignm length: 156
Alignm identity: 129
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 32, 39

Conread position: 1392-1547
Cow position:
Alignm length: 156
Alignm identity: 118
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 21, 0

Conread position: 1395-1539
Cow position:
Alignm length: 146
Alignm identity: 110
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 24, 17

Show alignments to all cow chromosomes.