Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8052J10.3 |
| Conread position: | 10-444 |
| Cow position: | chr13:22124815-22125249 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 262 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 150, 142 |
| Conread position: | 13-385 |
| Cow position: | chr13:22124985-22125358 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 238 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 17, 106 |
| Conread position: | 14-444 |
| Cow position: | chr13:39930618-39931052 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 276 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 11, 414 |
| Conread position: | 32-363 |
| Cow position: | chr13:56292122-56291790 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 136, 123 |
| Conread position: | 34-386 |
| Cow position: | chr13:39930810-39931160 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 337, 0 |
| Conread position: | 34-444 |
| Cow position: | chr13:24162901-24163311 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 34-444 |
| Cow position: | chr13:39930726-39931136 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 262 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 36-367 |
| Cow position: | chr13:39984568-39984899 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 215 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 233, 225 |
| Conread position: | 36-386 |
| Cow position: | chr13:39984148-39984498 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 131, 120 |
| Conread position: | 36-386 |
| Cow position: | chr13:39984400-39984750 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 225 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 134, 116 |
| Conread position: | 36-392 |
| Cow position: | chr13:39984484-39984840 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 135, 120 |
| Conread position: | 36-414 |
| Cow position: | chr13:39984316-39984694 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 240 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 196, 190 |
| Conread position: | 39-300 |
| Cow position: | chr13:56334060-56334321 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 173 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 169, 192 |
| Conread position: | 39-414 |
| Cow position: | chr13:39984235-39984610 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 238 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 191, 186 |
| Conread position: | 40-392 |
| Cow position: | chr13:39983816-39984168 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 221 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 71, 23 |
| Conread position: | 54-425 |
| Cow position: | chr13:56292181-56291812 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 236 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 178, 15 |
| Conread position: | 60-444 |
| Cow position: | chr13:39930584-39930968 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 243 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 355, 364 |
| Conread position: | 63-444 |
| Cow position: | chr13:22125120-22125501 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 235 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 139, 151 |
| Conread position: | 75-392 |
| Cow position: | chr13:56333584-56333900 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 156, 11 |
Show alignments to all cow chromosomes.