Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8052J10.3
        

               Conread position:
               27-355
               

               Cow position:
               chr16:14627093-14626763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               213
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               20, 200
               

               Conread position:
               34-452
               

               Cow position:
               chr16:14627420-14627002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               268
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               198, 191
               

               Conread position:
               34-459
               

               Cow position:
               chr16:14627924-14627497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               430
               

               Alignm identity:
               260
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               30, 24
               

               Conread position:
               36-392
               

               Cow position:
               chr16:14627334-14626978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               232
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               235, 228
               

               Conread position:
               36-414
               

               Cow position:
               chr16:14627166-14626788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               246
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               36-451
               

               Cow position:
               chr16:14627250-14626835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               266
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               195, 191
               

               Conread position:
               36-469
               

               Cow position:
               chr16:14627754-14627322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               436
               

               Alignm identity:
               264
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               211, 188
               

               Conread position:
               53-452
               

               Cow position:
               chr16:14627485-14627086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               252
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               31, 27
               

               Conread position:
               67-451
               

               Cow position:
               chr16:14627976-14627591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               244
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               6, 23
               

               Conread position:
               105-393
               

               Cow position:
               chr16:14627517-14627229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               126, 120
               
Show alignments to all cow chromosomes.