Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8052J10.3 |
| Conread position: | 17-318 |
| Cow position: | chr17:22473650-22473952 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 274, 0 |
| Conread position: | 17-382 |
| Cow position: | chr17:22552118-22551751 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 22-451 |
| Cow position: | chr17:22452396-22451967 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 270 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 210, 203 |
| Conread position: | 23-449 |
| Cow position: | chr17:22552699-22552271 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 274 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 8, 66 |
| Conread position: | 25-463 |
| Cow position: | chr17:22552865-22552425 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 262 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 29-386 |
| Cow position: | chr17:22499151-22498794 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 215, 206 |
| Conread position: | 29-451 |
| Cow position: | chr17:22499235-22498813 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 246 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 242, 235 |
| Conread position: | 30-391 |
| Cow position: | chr17:22553111-22552750 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 229 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 239, 233 |
| Conread position: | 31-444 |
| Cow position: | chr17:22499401-22498988 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 256 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 240, 229 |
| Conread position: | 34-386 |
| Cow position: | chr17:22552351-22551999 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 112, 107 |
| Conread position: | 34-386 |
| Cow position: | chr17:22590105-22589753 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 112, 107 |
| Conread position: | 34-394 |
| Cow position: | chr17:22552267-22551907 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 234 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 112, 107 |
| Conread position: | 34-405 |
| Cow position: | chr17:22552771-22552400 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 238 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 112, 107 |
| Conread position: | 34-434 |
| Cow position: | chr17:22590189-22589789 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 241 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 112, 107 |
| Conread position: | 34-440 |
| Cow position: | chr17:22589937-22589531 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 246 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 112, 107 |
| Conread position: | 34-444 |
| Cow position: | chr17:22552183-22551773 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 253 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 112, 107 |
| Conread position: | 34-451 |
| Cow position: | chr17:22552435-22552018 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 256 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 237, 221 |
| Conread position: | 34-460 |
| Cow position: | chr17:22551931-22551504 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 265 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 44, 35 |
| Conread position: | 36-363 |
| Cow position: | chr17:22451962-22451635 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 213 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 139, 120 |
| Conread position: | 36-386 |
| Cow position: | chr17:22499312-22498962 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 221 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 234, 228 |
| Conread position: | 36-392 |
| Cow position: | chr17:22473585-22473942 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 235 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 112, 105 |
| Conread position: | 36-405 |
| Cow position: | chr17:22552517-22552148 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 120, 148 |
| Conread position: | 36-414 |
| Cow position: | chr17:22452214-22451836 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 110, 105 |
| Conread position: | 36-415 |
| Cow position: | chr17:22473417-22473796 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 42, 33 |
| Conread position: | 36-452 |
| Cow position: | chr17:22473501-22473917 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 250 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 39-386 |
| Cow position: | chr17:22473336-22473683 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 124, 113 |
| Conread position: | 41-380 |
| Cow position: | chr17:22452041-22451702 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 41-416 |
| Cow position: | chr17:22452125-22451750 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 191, 185 |
| Conread position: | 52-386 |
| Cow position: | chr17:22498876-22498542 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 111, 104 |
| Conread position: | 52-452 |
| Cow position: | chr17:22473265-22473665 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 248 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 120, 104 |
| Conread position: | 53-449 |
| Cow position: | chr17:22590254-22589857 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 241 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 116, 100 |
| Conread position: | 60-451 |
| Cow position: | chr17:22552577-22552186 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 249 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 86, 81 |
| Conread position: | 61-458 |
| Cow position: | chr17:22552996-22552598 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 252 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 170, 164 |
| Conread position: | 84-451 |
| Cow position: | chr17:22452250-22451883 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 232 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 309, 316 |
| Conread position: | 91-449 |
| Cow position: | chr17:22452411-22452052 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 140, 134 |
| Conread position: | 94-451 |
| Cow position: | chr17:22590297-22589940 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.