Cow genome map

Conread name: Ss1.1-Pig4-TMW8052J10.3

Conread position: 14-444
Cow position: chr19:23596926-23597353 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 265
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 132, 106

Conread position: 17-444
Cow position: chr19:23649703-23650130 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 275
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 133, 141

Conread position: 18-386
Cow position: chr19:20635735-20635367 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 226
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 24, 34

Conread position: 18-459
Cow position: chr19:23649368-23649810 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 277
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 214, 207

Conread position: 19-322
Cow position: chr19:20677764-20678069 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 197
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 25, 208

Conread position: 19-386
Cow position: chr19:20677680-20678049 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 238
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 25, 208

Conread position: 20-443
Cow position: chr19:20635483-20635058 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 267
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 17, 123

Conread position: 23-455
Cow position: chr19:23614678-23615111 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 269
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 7, 203

Conread position: 29-414
Cow position: chr19:23650051-23650436 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 246
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 118, 112

Conread position: 29-418
Cow position: chr19:20677944-20678333 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 232
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 144, 127

Conread position: 32-393
Cow position: chr19:20677611-20677972 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 234
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 199, 193

Conread position: 32-405
Cow position: chr19:14940152-14940525 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 236
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 199, 193

Conread position: 34-381
Cow position: chr19:14959160-14958819 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 223
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 40, 0

Conread position: 34-451
Cow position: chr19:14948468-14948052 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 267
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 112, 65

Conread position: 34-452
Cow position: chr19:14940574-14940992 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 260
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 361, 370

Conread position: 34-502
Cow position: chr19:23649552-23650021 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 281
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 388, 368

Conread position: 36-375
Cow position: chr19:23650142-23650481 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 218
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 195, 189

Conread position: 36-382
Cow position: chr19:23597365-23597711 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 224
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 195, 189

Conread position: 36-384
Cow position: chr19:14948383-14948035 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 225
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 196, 189

Conread position: 36-386
Cow position: chr19:43570140-43569790 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 231
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 196, 189

Conread position: 36-392
Cow position: chr19:23614608-23614964 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 226
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 195, 189

Conread position: 36-393
Cow position: chr19:20635549-20635192 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 220
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 135, 121

Conread position: 36-393
Cow position: chr19:20678287-20678644 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 230
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 44, 50

Conread position: 36-393
Cow position: chr19:23614020-23614377 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 219
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 195, 189

Conread position: 36-393
Cow position: chr19:23614524-23614881 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 225
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 195, 189

Conread position: 36-394
Cow position: chr19:23613684-23614042 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 237
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 175, 166

Conread position: 36-394
Cow position: chr19:43570224-43569866 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 231
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 173, 166

Conread position: 36-405
Cow position: chr19:23649890-23650259 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 235
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 112, 106

Conread position: 36-424
Cow position: chr19:20635633-20635245 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 240
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 195, 189

Conread position: 36-430
Cow position: chr19:20677867-20678261 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 236
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 36-430
Cow position: chr19:23649638-23650032 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 190

Conread position: 36-431
Cow position: chr19:23614440-23614835 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 253
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 127, 120

Conread position: 36-442
Cow position: chr19:23597281-23597687 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 105

Conread position: 36-444
Cow position: chr19:23614104-23614512 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 263
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 45, 57

Conread position: 36-444
Cow position: chr19:23649974-23650382 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 269
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 27, 22

Conread position: 36-449
Cow position: chr19:23597197-23597611 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 268
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 380, 388

Conread position: 36-451
Cow position: chr19:14939988-14940403 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 260
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 196, 189

Conread position: 36-451
Cow position: chr19:14940072-14940487 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 263
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 379, 384

Conread position: 36-451
Cow position: chr19:23613768-23614183 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 256
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 139, 116

Conread position: 36-451
Cow position: chr19:23649302-23649717 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 262
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 45, 57

Conread position: 36-452
Cow position: chr19:14940324-14940740 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 189

Conread position: 36-452
Cow position: chr19:14940492-14940908 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 261
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 151, 141

Conread position: 36-452
Cow position: chr19:14940660-14941076 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 189

Conread position: 36-462
Cow position: chr19:14960141-14959716 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 274
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 196, 191

Conread position: 38-393
Cow position: chr19:23613602-23613957 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 228
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 43, 54

Conread position: 38-442
Cow position: chr19:23614274-23614678 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 253
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 39-393
Cow position: chr19:20678122-20678476 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 222
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 63, 43

Conread position: 39-415
Cow position: chr19:20677534-20677910 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 228
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 192, 186

Conread position: 39-449
Cow position: chr19:23613351-23613762 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 259
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 24, 19

Conread position: 39-463
Cow position: chr19:14959239-14958820 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 272
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 342, 120

Conread position: 40-386
Cow position: chr19:14960387-14960043 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 229
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 111, 119

Conread position: 40-395
Cow position: chr19:23597032-23597388 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 216
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 9, 186

Conread position: 40-447
Cow position: chr19:14960219-14959814 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 262
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 192, 68

Conread position: 41-452
Cow position: chr19:43570051-43569644 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 248
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 318, 0

Conread position: 52-439
Cow position: chr19:20678219-20678606 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 234
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 52-451
Cow position: chr19:14940424-14940823 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 173

Conread position: 58-500
Cow position: chr19:14959304-14958867 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 278
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 23, 36

Conread position: 60-451
Cow position: chr19:14959711-14959322 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 247
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 110, 60

Conread position: 60-451
Cow position: chr19:23597137-23597528 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 253
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 112, 96

Conread position: 63-393
Cow position: chr19:43570278-43569951 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 216
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 116, 27

Conread position: 63-452
Cow position: chr19:14960448-14960061 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 244
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 168, 162

Conread position: 90-452
Cow position: chr19:14939959-14940320 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 223
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 16, 0

Conread position: 93-393
Cow position: chr19:23614413-23614713 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 195
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 138, 132

Conread position: 121-463
Cow position: chr19:23613349-23613692 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 214
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 26, 21

Conread position: 122-445
Cow position: chr19:14960473-14960150 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 204
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 110, 103

Show alignments to all cow chromosomes.