Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8052J10.3 |
| Conread position: | 13-443 |
| Cow position: | chr21:12659142-12659573 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 261 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 24, 5 |
| Conread position: | 34-295 |
| Cow position: | chr21:34222804-34222543 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 149, 143 |
| Conread position: | 34-376 |
| Cow position: | chr21:34222888-34222544 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 326, 0 |
| Conread position: | 34-381 |
| Cow position: | chr21:12659668-12660015 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 152, 141 |
| Conread position: | 34-382 |
| Cow position: | chr21:12608766-12608418 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 233 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 233, 228 |
| Conread position: | 34-452 |
| Cow position: | chr21:12659248-12659666 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 263 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 259, 252 |
| Conread position: | 35-452 |
| Cow position: | chr21:34223055-34222638 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 190 |
| Conread position: | 36-368 |
| Cow position: | chr21:12608260-12607928 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 160, 141 |
| Conread position: | 36-387 |
| Cow position: | chr21:12608596-12608245 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 36-392 |
| Cow position: | chr21:34222970-34222614 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 236 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 233, 226 |
| Conread position: | 36-424 |
| Cow position: | chr21:12659334-12659722 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 238 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 110, 105 |
| Conread position: | 36-430 |
| Cow position: | chr21:12659082-12659476 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 248 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 129, 142 |
| Conread position: | 36-444 |
| Cow position: | chr21:12658998-12659406 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 249 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 36-452 |
| Cow position: | chr21:12608512-12608096 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 247 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 306, 311 |
| Conread position: | 36-452 |
| Cow position: | chr21:12608848-12608432 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 270 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 148, 138 |
| Conread position: | 36-452 |
| Cow position: | chr21:12658830-12659246 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 249 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 36-452 |
| Cow position: | chr21:12658914-12659330 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 250 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 369, 373 |
| Conread position: | 36-453 |
| Cow position: | chr21:12659418-12659835 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 250 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 36-464 |
| Cow position: | chr21:12659586-12660012 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 265 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 190, 196 |
| Conread position: | 38-452 |
| Cow position: | chr21:12659504-12659918 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 254 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 308, 304 |
| Conread position: | 54-444 |
| Cow position: | chr21:12608662-12608272 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 242 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 171, 182 |
| Conread position: | 59-444 |
| Cow position: | chr21:12608909-12608524 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 249 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 208, 190 |
| Conread position: | 102-452 |
| Cow position: | chr21:34223153-34222806 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 138-377 |
| Cow position: | chr21:12608914-12608675 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 231-452 |
| Cow position: | chr21:12608905-12608684 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 171, 181 |
Show alignments to all cow chromosomes.