Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8052J10.3
        

               Conread position:
               3-376
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               226
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               71, 35
               

               Conread position:
               4-470
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               283
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               182, 12
               

               Conread position:
               32-386
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               223
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               9, 233
               

               Conread position:
               32-393
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               226
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               200, 193
               

               Conread position:
               34-369
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               47, 52
               

               Conread position:
               34-377
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               177, 168
               

               Conread position:
               34-386
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               198, 191
               

               Conread position:
               34-408
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               238
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               112, 107
               

               Conread position:
               34-412
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               243
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               197, 191
               

               Conread position:
               34-452
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               270
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               198, 191
               

               Conread position:
               34-452
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               264
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               129, 122
               

               Conread position:
               34-452
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               264
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               134, 118
               

               Conread position:
               34-493
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               292
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               96, 109
               

               Conread position:
               35-405
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               242
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               49, 39
               

               Conread position:
               36-300
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               195, 189
               

               Conread position:
               36-300
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               195, 189
               

               Conread position:
               36-330
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               190
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               82, 43
               

               Conread position:
               36-332
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               191
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               43, 56
               

               Conread position:
               36-363
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               40, 33
               

               Conread position:
               36-376
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               133, 120
               

               Conread position:
               36-376
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               227
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               42, 33
               

               Conread position:
               36-381
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               223
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               36-381
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               36-382
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               36-386
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               233
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               48, 44
               

               Conread position:
               36-387
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               43, 53
               

               Conread position:
               36-392
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               236
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               132, 120
               

               Conread position:
               36-392
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               126, 131
               

               Conread position:
               36-393
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               233
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               195, 189
               

               Conread position:
               36-393
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               115, 122
               

               Conread position:
               36-396
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               230
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               42, 33
               

               Conread position:
               36-407
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               240
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               13, 8
               

               Conread position:
               36-412
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               236
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               195, 189
               

               Conread position:
               36-414
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               238
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               42, 33
               

               Conread position:
               36-417
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               262
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               49, 37
               

               Conread position:
               36-427
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               242
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               195, 190
               

               Conread position:
               36-443
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               254
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               235, 229
               

               Conread position:
               36-444
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               253
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               127, 137
               

               Conread position:
               36-451
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               249
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               52, 57
               

               Conread position:
               36-451
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               265
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               163, 155
               

               Conread position:
               36-451
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               267
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               110, 105
               

               Conread position:
               36-451
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               266
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               110, 106
               

               Conread position:
               36-452
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               264
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               40, 31
               

               Conread position:
               36-452
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               263
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               195, 189
               

               Conread position:
               36-452
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               272
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               130, 121
               

               Conread position:
               36-452
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               246
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               369, 384
               

               Conread position:
               36-452
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               255
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               195, 189
               

               Conread position:
               36-452
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               252
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               236, 226
               

               Conread position:
               36-452
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               253
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               131, 120
               

               Conread position:
               36-453
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               268
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               49, 44
               

               Conread position:
               36-453
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               256
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               110, 105
               

               Conread position:
               36-460
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               260
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               195, 189
               

               Conread position:
               36-465
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               266
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               170, 148
               

               Conread position:
               36-470
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               276
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               43, 51
               

               Conread position:
               36-474
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               270
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               110, 105
               

               Conread position:
               36-487
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               274
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               226, 205
               

               Conread position:
               38-452
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               258
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               9, 155
               

               Conread position:
               39-393
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               219
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               169, 150
               

               Conread position:
               39-414
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               242
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               124, 117
               

               Conread position:
               40-387
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               154, 165
               

               Conread position:
               40-451
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               249
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               192, 185
               

               Conread position:
               40-452
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               259
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               212, 231
               

               Conread position:
               41-383
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               330, 340
               

               Conread position:
               46-452
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               259
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               203, 74
               

               Conread position:
               50-509
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               291
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               182, 175
               

               Conread position:
               51-393
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               222
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               112, 105
               

               Conread position:
               51-393
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               112, 105
               

               Conread position:
               52-451
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               239
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               52-453
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               247
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               133, 125
               

               Conread position:
               53-452
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               179, 172
               

               Conread position:
               53-452
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               254
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               218, 211
               

               Conread position:
               60-452
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               244
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               61-393
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               224
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               137, 130
               

               Conread position:
               62-393
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               16, 23
               

               Conread position:
               63-440
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               239
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               10, 23
               

               Conread position:
               89-452
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               227
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               103, 94
               

               Conread position:
               99-449
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               340, 332
               

               Conread position:
               100-449
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               221
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               67, 56
               

               Conread position:
               126-451
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               205
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               46, 30
               
Show alignments to all cow chromosomes.