Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8052J10.3 |
| Conread position: | 6-452 |
| Cow position: | chr3:62722187-62721744 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 287 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 73, 15 |
| Conread position: | 35-449 |
| Cow position: | chr3:62742442-62742852 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 251 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 13, 7 |
| Conread position: | 36-325 |
| Cow position: | chr3:62721824-62721535 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 185 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 196, 189 |
| Conread position: | 36-370 |
| Cow position: | chr3:62721908-62721574 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 57, 33 |
| Conread position: | 36-383 |
| Cow position: | chr3:62742692-62743033 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 196, 58 |
| Conread position: | 36-393 |
| Cow position: | chr3:68045682-68046039 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 234 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 166, 195 |
| Conread position: | 36-393 |
| Cow position: | chr3:68045766-68046123 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 140, 120 |
| Conread position: | 36-444 |
| Cow position: | chr3:62722244-62721836 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 264 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 195, 189 |
| Conread position: | 36-452 |
| Cow position: | chr3:68045934-68046350 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 248 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 106, 112 |
| Conread position: | 36-455 |
| Cow position: | chr3:62722076-62721655 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 268 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 210, 205 |
| Conread position: | 39-354 |
| Cow position: | chr3:62743176-62743491 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 127, 112 |
| Conread position: | 39-460 |
| Cow position: | chr3:62721989-62721569 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 274 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 107, 102 |
| Conread position: | 46-443 |
| Cow position: | chr3:62742286-62742679 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 245 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 117, 68 |
| Conread position: | 48-387 |
| Cow position: | chr3:68027017-68027356 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 15, 10 |
| Conread position: | 52-444 |
| Cow position: | chr3:62742543-62742931 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 247 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 180, 98 |
| Conread position: | 61-449 |
| Cow position: | chr3:62722387-62721998 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 243 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 53, 69 |
| Conread position: | 62-368 |
| Cow position: | chr3:68027451-68027757 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 194 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 87-416 |
| Cow position: | chr3:68045565-68045894 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 206 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 145, 138 |
| Conread position: | 96-470 |
| Cow position: | chr3:62742252-62742625 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 231 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 135, 101 |
| Conread position: | 153-382 |
| Cow position: | chr3:68045547-68045776 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 79, 72 |
Show alignments to all cow chromosomes.