Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8052J10.3 |
| Conread position: | 3-449 |
| Cow position: | chr6:49340791-49341235 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 228, 18 |
| Conread position: | 3-463 |
| Cow position: | chr6:49396260-49396717 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 294 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 230, 22 |
| Conread position: | 13-449 |
| Cow position: | chr6:49340713-49341151 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 5 |
| Conread position: | 17-415 |
| Cow position: | chr6:49362485-49362869 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 245 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 215, 140 |
| Conread position: | 18-460 |
| Cow position: | chr6:49340969-49341414 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 254 |
| Conread position: | 34-449 |
| Cow position: | chr6:49340903-49341319 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 412, 0 |
| Conread position: | 34-509 |
| Cow position: | chr6:49340483-49340956 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 412, 428 |
| Conread position: | 36-373 |
| Cow position: | chr6:49429149-49429486 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 36-418 |
| Cow position: | chr6:49341073-49341454 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 251 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 110, 105 |
| Conread position: | 36-422 |
| Cow position: | chr6:49428897-49429283 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 238 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 56, 52 |
| Conread position: | 36-441 |
| Cow position: | chr6:49428309-49428714 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 357, 363 |
| Conread position: | 36-443 |
| Cow position: | chr6:49428393-49428800 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 242 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 357, 363 |
| Conread position: | 36-443 |
| Cow position: | chr6:49428561-49428968 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 245 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 135, 140 |
| Conread position: | 36-449 |
| Cow position: | chr6:49340653-49341067 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 264 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 410, 0 |
| Conread position: | 36-452 |
| Cow position: | chr6:49428981-49429397 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 250 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 106, 111 |
| Conread position: | 36-452 |
| Cow position: | chr6:49429065-49429481 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 243 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 111, 105 |
| Conread position: | 54-443 |
| Cow position: | chr6:49428243-49428632 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 339, 346 |
| Conread position: | 58-452 |
| Cow position: | chr6:49396228-49396622 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 250 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 86, 90 |
| Conread position: | 58-460 |
| Cow position: | chr6:49396480-49396883 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 396, 0 |
| Conread position: | 102-376 |
| Cow position: | chr6:49396692-49396966 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 102-385 |
| Cow position: | chr6:49395942-49396225 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 185 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 42, 37 |
| Conread position: | 230-449 |
| Cow position: | chr6:49340427-49340647 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 216, 0 |
Show alignments to all cow chromosomes.