Cow genome map

Conread name: Ss1.1-Pig4-TMW8052J10.3

Conread position: 15-416
Cow position: chr8:55580964-55581367 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 18-451
Cow position: chr8:46816024-46816457 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 272
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 213, 208

Conread position: 22-392
Cow position: chr8:45201003-45201371 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 245
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 141, 17

Conread position: 22-452
Cow position: chr8:48407563-48407133 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 203

Conread position: 34-386
Cow position: chr8:46816292-46816644 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 222
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 34-444
Cow position: chr8:48407635-48407225 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 249
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 34-446
Cow position: chr8:46816124-46816536 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 259
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 34-449
Cow position: chr8:45201181-45201597 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 258
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 197, 191

Conread position: 34-449
Cow position: chr8:45201265-45201681 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 270
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 196, 191

Conread position: 34-449
Cow position: chr8:45201433-45201849 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 191

Conread position: 34-451
Cow position: chr8:45201517-45201934 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 270
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 197, 191

Conread position: 34-452
Cow position: chr8:48406963-48406545 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 271
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 58, 47

Conread position: 34-452
Cow position: chr8:48407299-48406881 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 267
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 163, 197

Conread position: 34-460
Cow position: chr8:45201349-45201776 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 274
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 196, 191

Conread position: 34-460
Cow position: chr8:46816796-46817223 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 266
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 44, 35

Conread position: 35-405
Cow position: chr8:46816629-46816999 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 229
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 110, 106

Conread position: 36-338
Cow position: chr8:45201687-45201990 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 193
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 127, 120

Conread position: 36-373
Cow position: chr8:45201603-45201940 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 224
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 196, 189

Conread position: 36-386
Cow position: chr8:46816210-46816560 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 218
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 105, 110

Conread position: 36-393
Cow position: chr8:46816714-46817071 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 223
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 195, 189

Conread position: 36-400
Cow position: chr8:55581071-55581435 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 229
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 195, 189

Conread position: 36-415
Cow position: chr8:48407045-48406666 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 231
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 196, 189

Conread position: 36-444
Cow position: chr8:55580903-55581311 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 254
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 235, 229

Conread position: 36-451
Cow position: chr8:46816462-46816877 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 255
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 386, 380

Conread position: 36-451
Cow position: chr8:46816882-46817297 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 253
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 36-451
Cow position: chr8:55581239-55581654 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 268
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 144, 129

Conread position: 36-452
Cow position: chr8:48407465-48407049 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 260
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 196, 189

Conread position: 36-460
Cow position: chr8:46816378-46816803 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 272
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 109, 105

Conread position: 36-473
Cow position: chr8:48407213-48406776 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 279
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 196, 189

Conread position: 38-443
Cow position: chr8:46816546-46816953 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 250
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 6, 364

Conread position: 38-451
Cow position: chr8:48406707-48406294 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 110

Conread position: 38-451
Cow position: chr8:55580819-55581234 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 255
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 9, 189

Conread position: 50-386
Cow position: chr8:48407115-48406779 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 228
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 220, 215

Conread position: 50-452
Cow position: chr8:55580749-55581151 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 251
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 49, 28

Conread position: 60-419
Cow position: chr8:46816990-46817349 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 222
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 250, 240

Conread position: 60-451
Cow position: chr8:46815982-46816373 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 238
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 321, 344

Conread position: 60-462
Cow position: chr8:45200955-45201359 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 252
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 108, 96

Conread position: 63-393
Cow position: chr8:55581182-55581512 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 209
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 168, 162

Conread position: 92-451
Cow position: chr8:48407325-48406966 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 237
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 71, 64

Conread position: 93-451
Cow position: chr8:48406736-48406378 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 217
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 32, 16

Conread position: 269-507
Cow position: chr8:48407568-48407329 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 159
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 185, 193

Show alignments to all cow chromosomes.