Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8052L01.5 |
| Conread position: | 46-299 |
| Cow position: | chr10:59355323-59355575 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 31, 23 |
| Conread position: | 51-310 |
| Cow position: | chr10:10188290-10188544 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 8, 75 |
| Conread position: | 56-316 |
| Cow position: | chr10:11095861-11095590 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 9, 90 |
| Conread position: | 58-313 |
| Cow position: | chr10:60425269-60425013 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 172 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 20, 107 |
| Conread position: | 60-288 |
| Cow position: | chr10:53096583-53096811 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 18, 75 |
| Conread position: | 60-309 |
| Cow position: | chr10:46294124-46293878 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 168 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 97, 147 |
| Conread position: | 60-310 |
| Cow position: | chr10:62773671-62773923 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 113, 80 |
| Conread position: | 60-313 |
| Cow position: | chr10:52703134-52703396 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 18, 69 |
| Conread position: | 60-316 |
| Cow position: | chr10:15423519-15423264 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 26, 57 |
| Conread position: | 60-322 |
| Cow position: | chr10:53004364-53004101 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 18, 36 |
| Conread position: | 62-313 |
| Cow position: | chr10:67193946-67194193 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 16, 74 |
| Conread position: | 62-317 |
| Cow position: | chr10:37779184-37778932 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 16, 79 |
| Conread position: | 63-309 |
| Cow position: | chr10:58797895-58797646 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 113, 77 |
| Conread position: | 63-310 |
| Cow position: | chr10:66081103-66080858 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 113, 23 |
| Conread position: | 63-313 |
| Cow position: | chr10:13187902-13188153 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 113, 80 |
| Conread position: | 71-303 |
| Cow position: | chr10:11226325-11226556 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 7, 18 |
| Conread position: | 73-310 |
| Cow position: | chr10:48836080-48836320 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 9, 68 |
| Conread position: | 77-313 |
| Cow position: | chr10:62536464-62536229 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 101, 46 |
| Conread position: | 83-270 |
| Cow position: | chr10:23380891-23381079 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 97, 12 |
| Conread position: | 84-287 |
| Cow position: | chr10:63357049-63357251 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 88, 118 |
| Conread position: | 85-318 |
| Cow position: | chr10:26570563-26570327 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 23, 38 |
| Conread position: | 94-323 |
| Cow position: | chr10:41621732-41621964 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 84, 35 |
| Conread position: | 120-313 |
| Cow position: | chr10:53109144-53109340 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 61, 20 |
| Conread position: | 127-338 |
| Cow position: | chr10:63683493-63683284 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 53, 69 |
| Conread position: | 138-313 |
| Cow position: | chr10:33390699-33390521 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 32, 13 |
| Conread position: | 139-313 |
| Cow position: | chr10:6264754-6264574 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 31, 16 |
| Conread position: | 141-308 |
| Cow position: | chr10:5447153-5446982 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 179-325 |
| Cow position: | chr10:55274233-55274378 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 128, 9 |
Show alignments to all cow chromosomes.