Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8052L01.5 |
| Conread position: | 47-283 |
| Cow position: | chr11:52440967-52440733 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 125, 38 |
| Conread position: | 51-291 |
| Cow position: | chr11:71631057-71630818 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 171 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 38, 13 |
| Conread position: | 53-314 |
| Cow position: | chr11:24176110-24175848 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 10, 110 |
| Conread position: | 57-327 |
| Cow position: | chr11:64142930-64143197 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 15, 29 |
| Conread position: | 60-309 |
| Cow position: | chr11:75992801-75993045 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 18, 70 |
| Conread position: | 60-313 |
| Cow position: | chr11:2873534-2873281 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 18, 57 |
| Conread position: | 61-309 |
| Cow position: | chr11:14678761-14678508 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 23, 82 |
| Conread position: | 83-309 |
| Cow position: | chr11:57059184-57058957 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 91, 124 |
| Conread position: | 85-389 |
| Cow position: | chr11:40485486-40485179 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 72, 55 |
| Conread position: | 93-288 |
| Cow position: | chr11:30107246-30107450 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 7, 37 |
| Conread position: | 120-308 |
| Cow position: | chr11:48510718-48510908 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 59, 45 |
| Conread position: | 125-314 |
| Cow position: | chr11:55361453-55361642 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 53, 15 |
| Conread position: | 127-310 |
| Cow position: | chr11:37395848-37396034 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 38, 13 |
| Conread position: | 127-311 |
| Cow position: | chr11:72424682-72424868 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 32, 13 |
| Conread position: | 131-319 |
| Cow position: | chr11:4580489-4580298 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 32, 9 |
| Conread position: | 134-313 |
| Cow position: | chr11:40631220-40631035 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 44, 65 |
| Conread position: | 140-313 |
| Cow position: | chr11:9889411-9889237 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 32, 15 |
| Conread position: | 142-318 |
| Cow position: | chr11:53940727-53940905 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 38, 12 |
| Conread position: | 144-320 |
| Cow position: | chr11:12820731-12820550 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 134 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 34, 99 |
| Conread position: | 183-313 |
| Cow position: | chr11:30113932-30114060 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 11, 0 |
Show alignments to all cow chromosomes.