Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8052L01.5
        

               Conread position:
               23-308
               

               Cow position:
               chr13:19675380-19675666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               29, 124
               

               Conread position:
               60-310
               

               Cow position:
               chr13:53133860-53134118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               18, 84
               

               Conread position:
               63-333
               

               Cow position:
               chr13:6086198-6085931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               183
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               21, 61
               

               Conread position:
               80-313
               

               Cow position:
               chr13:32720471-32720238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               97, 62
               

               Conread position:
               85-313
               

               Cow position:
               chr13:6555478-6555249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               96, 46
               

               Conread position:
               86-309
               

               Cow position:
               chr13:55880858-55881079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               90, 54
               

               Conread position:
               125-336
               

               Cow position:
               chr13:45659476-45659262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               57, 17
               

               Conread position:
               138-304
               

               Cow position:
               chr13:54764655-54764487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               25, 17
               

               Conread position:
               141-308
               

               Cow position:
               chr13:49523959-49523791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               37, 17
               

               Conread position:
               143-288
               

               Cow position:
               chr13:49496705-49496852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               153-323
               

               Cow position:
               chr13:46712325-46712151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               132
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               16, 74
               

               Conread position:
               183-312
               

               Cow position:
               chr13:13074490-13074361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               97
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.