Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8052L01.5 |
| Conread position: | 60-319 |
| Cow position: | chr16:42964136-42963874 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 17, 83 |
| Conread position: | 69-316 |
| Cow position: | chr16:51496838-51496588 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 9, 72 |
| Conread position: | 69-329 |
| Cow position: | chr16:45178841-45178578 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 176 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 9, 72 |
| Conread position: | 77-300 |
| Cow position: | chr16:3057861-3058085 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 38, 126 |
| Conread position: | 83-310 |
| Cow position: | chr16:15859973-15859743 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 74, 57 |
| Conread position: | 85-313 |
| Cow position: | chr16:54614310-54614541 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 165 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 65, 55 |
| Conread position: | 86-317 |
| Cow position: | chr16:31212153-31211924 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 219, 54 |
| Conread position: | 88-301 |
| Cow position: | chr16:11434161-11434376 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 84, 49 |
| Conread position: | 105-313 |
| Cow position: | chr16:259721-259514 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 68, 37 |
| Conread position: | 109-309 |
| Cow position: | chr16:3972981-3972779 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 48, 31 |
| Conread position: | 112-302 |
| Cow position: | chr16:21468930-21469121 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 64, 28 |
| Conread position: | 120-316 |
| Cow position: | chr16:56210397-56210594 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 60, 193 |
| Conread position: | 125-312 |
| Cow position: | chr16:53247650-53247839 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 45, 17 |
| Conread position: | 125-313 |
| Cow position: | chr16:28270842-28270651 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 51, 15 |
| Conread position: | 125-324 |
| Cow position: | chr16:37397428-37397227 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 53, 15 |
| Conread position: | 127-313 |
| Cow position: | chr16:44743894-44743711 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 51, 16 |
| Conread position: | 142-313 |
| Cow position: | chr16:47603385-47603558 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 36, 15 |
| Conread position: | 174-324 |
| Cow position: | chr16:28002718-28002568 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 141, 23 |
| Conread position: | 205-309 |
| Cow position: | chr16:40348747-40348643 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 86 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.