Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8052L01.5
        

               Conread position:
               19-309
               

               Cow position:
               chr22:19544182-19543887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               60-313
               

               Cow position:
               chr22:19031908-19031654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               172
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               24, 210
               

               Conread position:
               62-313
               

               Cow position:
               chr22:16607956-16608204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               16, 71
               

               Conread position:
               80-309
               

               Cow position:
               chr22:20939639-20939408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               77, 41
               

               Conread position:
               104-310
               

               Cow position:
               chr22:17945418-17945206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               74, 17
               

               Conread position:
               171-317
               

               Cow position:
               chr22:14494836-14494691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               144, 25
               

               Conread position:
               183-320
               

               Cow position:
               chr22:33541603-33541737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               11, 0
               
Show alignments to all cow chromosomes.