Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8052L01.5 |
| Conread position: | 40-271 |
| Cow position: | chr25:5186326-5186558 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 19, 84 |
| Conread position: | 46-313 |
| Cow position: | chr25:20142870-20142604 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 184 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 13, 96 |
| Conread position: | 48-307 |
| Cow position: | chr25:27516565-27516823 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 87, 25 |
| Conread position: | 52-309 |
| Cow position: | chr25:8511207-8511464 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 32, 51 |
| Conread position: | 53-341 |
| Cow position: | chr25:9648469-9648763 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 192 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 9, 19 |
| Conread position: | 54-308 |
| Cow position: | chr25:8500294-8500552 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 178 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 5, 87 |
| Conread position: | 60-313 |
| Cow position: | chr25:25549312-25549063 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 24, 55 |
| Conread position: | 61-263 |
| Cow position: | chr25:14825335-14825539 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 17, 64 |
| Conread position: | 67-309 |
| Cow position: | chr25:5488369-5488120 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 8, 76 |
| Conread position: | 81-303 |
| Cow position: | chr25:20516183-20515961 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 80, 62 |
| Conread position: | 81-313 |
| Cow position: | chr25:17982558-17982792 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 73, 59 |
| Conread position: | 83-314 |
| Cow position: | chr25:30409795-30409558 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 79, 59 |
| Conread position: | 85-323 |
| Cow position: | chr25:5530797-5530558 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 95, 123 |
| Conread position: | 108-341 |
| Cow position: | chr25:9988484-9988256 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 68, 32 |
| Conread position: | 112-313 |
| Cow position: | chr25:13724422-13724624 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 46, 68 |
| Conread position: | 123-310 |
| Cow position: | chr25:32709748-32709555 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 30, 157 |
| Conread position: | 127-313 |
| Cow position: | chr25:11478644-11478461 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 50, 13 |
| Conread position: | 140-309 |
| Cow position: | chr25:12823074-12822905 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 38, 96 |
| Conread position: | 140-321 |
| Cow position: | chr25:12155000-12154818 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 43, 0 |
Show alignments to all cow chromosomes.