Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8052L01.5
        

               Conread position:
               38-330
               

               Cow position:
               chr29:18952187-18952468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               199
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               24, 75
               

               Conread position:
               46-310
               

               Cow position:
               chr29:19043398-19043137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               193
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               15, 97
               

               Conread position:
               49-314
               

               Cow position:
               chr29:37316784-37316517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               132, 15
               

               Conread position:
               52-297
               

               Cow position:
               chr29:38979393-38979639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               25, 93
               

               Conread position:
               60-274
               

               Cow position:
               chr29:5169425-5169643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               26, 86
               

               Conread position:
               60-309
               

               Cow position:
               chr29:8894686-8894937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               18, 46
               

               Conread position:
               68-314
               

               Cow position:
               chr29:3593972-3594219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               10, 73
               

               Conread position:
               76-314
               

               Cow position:
               chr29:31340749-31340985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               35, 13
               

               Conread position:
               77-305
               

               Cow position:
               chr29:22540138-22539908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               33, 47
               

               Conread position:
               140-309
               

               Cow position:
               chr29:17456390-17456224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               36, 77
               

               Conread position:
               140-313
               

               Cow position:
               chr29:5059079-5058902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               38, 15
               

               Conread position:
               203-320
               

               Cow position:
               chr29:37292308-37292189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               94
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               85, 0
               
Show alignments to all cow chromosomes.