Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8052L01.5 |
| Conread position: | 16-307 |
| Cow position: | chr3:76299690-76299395 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 205 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 36, 87 |
| Conread position: | 46-313 |
| Cow position: | chr3:59994974-59995233 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 53-313 |
| Cow position: | chr3:68584612-68584870 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 25, 92 |
| Conread position: | 60-249 |
| Cow position: | chr3:17041785-17041597 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 24, 82 |
| Conread position: | 60-300 |
| Cow position: | chr3:60313926-60314168 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 164 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 113, 80 |
| Conread position: | 60-304 |
| Cow position: | chr3:31100772-31100525 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 24, 9 |
| Conread position: | 60-313 |
| Cow position: | chr3:1520960-1521220 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 18, 76 |
| Conread position: | 60-394 |
| Cow position: | chr3:68512864-68513194 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 119, 23 |
| Conread position: | 65-313 |
| Cow position: | chr3:61069167-61069418 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 7, 21 |
| Conread position: | 68-314 |
| Cow position: | chr3:27135244-27135490 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 5, 18 |
| Conread position: | 85-313 |
| Cow position: | chr3:9447597-9447372 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 95, 77 |
| Conread position: | 86-313 |
| Cow position: | chr3:2301068-2300837 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 93, 128 |
| Conread position: | 125-303 |
| Cow position: | chr3:79703345-79703523 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 51, 15 |
| Conread position: | 125-328 |
| Cow position: | chr3:16366237-16366037 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 79, 17 |
| Conread position: | 128-310 |
| Cow position: | chr3:8592765-8592581 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 138-313 |
| Cow position: | chr3:16632002-16631826 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 37, 17 |
| Conread position: | 140-309 |
| Cow position: | chr3:54510820-54510993 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 36, 15 |
| Conread position: | 141-313 |
| Cow position: | chr3:30242542-30242717 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 38, 151 |
| Conread position: | 156-317 |
| Cow position: | chr3:79637987-79638150 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 25, 14 |
| Conread position: | 173-317 |
| Cow position: | chr3:31792614-31792755 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 185-318 |
| Cow position: | chr3:69562794-69562660 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 188-310 |
| Cow position: | chr3:80895761-80895884 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 95 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 199-310 |
| Cow position: | chr3:46056668-46056778 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 92 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 5, 68 |
Show alignments to all cow chromosomes.