Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8052L01.5 |
| Conread position: | 16-310 |
| Cow position: | chr4:65453633-65453931 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 32, 16 |
| Conread position: | 53-309 |
| Cow position: | chr4:18136971-18136710 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 25, 16 |
| Conread position: | 58-317 |
| Cow position: | chr4:56555671-56555935 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 26, 91 |
| Conread position: | 60-303 |
| Cow position: | chr4:29177117-29177360 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 29, 75 |
| Conread position: | 60-309 |
| Cow position: | chr4:26872276-26872519 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 18, 81 |
| Conread position: | 60-310 |
| Cow position: | chr4:3681367-3681125 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 118, 73 |
| Conread position: | 60-313 |
| Cow position: | chr4:8222-7969 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 18, 39 |
| Conread position: | 60-313 |
| Cow position: | chr4:56585899-56586151 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 24, 10 |
| Conread position: | 60-317 |
| Cow position: | chr4:14047196-14047454 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 116, 24 |
| Conread position: | 61-313 |
| Cow position: | chr4:45178168-45178422 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 181 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 17, 65 |
| Conread position: | 63-309 |
| Cow position: | chr4:56223004-56222761 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 20, 58 |
| Conread position: | 70-309 |
| Cow position: | chr4:31517069-31517311 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 162 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 77-309 |
| Cow position: | chr4:32550924-32551156 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 103, 46 |
| Conread position: | 83-293 |
| Cow position: | chr4:59045786-59045576 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 93, 59 |
| Conread position: | 85-319 |
| Cow position: | chr4:38462597-38462835 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 81, 72 |
| Conread position: | 88-288 |
| Cow position: | chr4:31972085-31971885 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 90, 52 |
| Conread position: | 105-381 |
| Cow position: | chr4:15895284-15895006 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 190 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 65, 50 |
| Conread position: | 122-309 |
| Cow position: | chr4:1537031-1537219 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 56, 103 |
| Conread position: | 125-308 |
| Cow position: | chr4:65343520-65343703 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 51, 20 |
| Conread position: | 136-326 |
| Cow position: | chr4:46231516-46231323 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 142-308 |
| Cow position: | chr4:35301143-35301311 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 33, 23 |
| Conread position: | 144-305 |
| Cow position: | chr4:65216416-65216580 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 155-313 |
| Cow position: | chr4:34642727-34642571 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 29, 0 |
Show alignments to all cow chromosomes.