Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8052L01.5 |
| Conread position: | 53-308 |
| Cow position: | chr5:31738854-31739113 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 174 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 33, 54 |
| Conread position: | 53-313 |
| Cow position: | chr5:42730942-42730681 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 184 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 25, 88 |
| Conread position: | 61-308 |
| Cow position: | chr5:23320811-23320559 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 177 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 17, 47 |
| Conread position: | 63-308 |
| Cow position: | chr5:14527861-14527618 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 116, 71 |
| Conread position: | 63-313 |
| Cow position: | chr5:4180432-4180685 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 21, 58 |
| Conread position: | 77-313 |
| Cow position: | chr5:56381076-56381310 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 15, 8 |
| Conread position: | 85-309 |
| Cow position: | chr5:20507841-20507627 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 26, 56 |
| Conread position: | 113-313 |
| Cow position: | chr5:43045361-43045159 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 64, 27 |
| Conread position: | 119-313 |
| Cow position: | chr5:70721283-70721087 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 148 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 8, 24 |
| Conread position: | 121-303 |
| Cow position: | chr5:9180225-9180409 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 55, 19 |
| Conread position: | 125-287 |
| Cow position: | chr5:45135195-45135031 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 53, 17 |
| Conread position: | 137-310 |
| Cow position: | chr5:15094049-15093874 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 41, 21 |
| Conread position: | 137-319 |
| Cow position: | chr5:49233701-49233885 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 20, 62 |
| Conread position: | 140-301 |
| Cow position: | chr5:16215828-16215992 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 37, 17 |
| Conread position: | 140-312 |
| Cow position: | chr5:69699709-69699537 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 36, 17 |
Show alignments to all cow chromosomes.