Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8052L01.5 |
| Conread position: | 8-316 |
| Cow position: | chr6:68860619-68860931 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 207 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 25, 70 |
| Conread position: | 53-346 |
| Cow position: | chr6:13511121-13510826 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 6, 99 |
| Conread position: | 60-302 |
| Cow position: | chr6:23842766-23842528 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 18, 76 |
| Conread position: | 60-346 |
| Cow position: | chr6:24647352-24647640 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 24, 76 |
| Conread position: | 63-310 |
| Cow position: | chr6:18018564-18018315 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 23, 78 |
| Conread position: | 63-325 |
| Cow position: | chr6:57700001-57699746 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 177 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 21, 43 |
| Conread position: | 63-334 |
| Cow position: | chr6:10173282-10173013 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 188 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 19, 74 |
| Conread position: | 64-313 |
| Cow position: | chr6:33857700-33857943 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 14, 77 |
| Conread position: | 68-313 |
| Cow position: | chr6:31179330-31179084 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 10, 54 |
| Conread position: | 69-313 |
| Cow position: | chr6:23269402-23269156 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 91, 66 |
| Conread position: | 70-309 |
| Cow position: | chr6:46778290-46778533 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 8, 53 |
| Conread position: | 85-300 |
| Cow position: | chr6:30421470-30421255 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 95, 57 |
| Conread position: | 85-313 |
| Cow position: | chr6:10702782-10702551 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 26, 32 |
| Conread position: | 85-319 |
| Cow position: | chr6:4011591-4011357 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 20, 7 |
| Conread position: | 85-329 |
| Cow position: | chr6:7276672-7276920 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 91, 55 |
| Conread position: | 86-314 |
| Cow position: | chr6:57088494-57088722 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 94, 42 |
| Conread position: | 89-310 |
| Cow position: | chr6:580102-579879 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 89, 54 |
| Conread position: | 91-313 |
| Cow position: | chr6:7297740-7297961 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 84, 49 |
| Conread position: | 109-308 |
| Cow position: | chr6:7470766-7470562 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 71, 7 |
| Conread position: | 125-288 |
| Cow position: | chr6:54984346-54984510 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 54, 15 |
| Conread position: | 125-322 |
| Cow position: | chr6:3012019-3011822 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 52, 15 |
| Conread position: | 140-313 |
| Cow position: | chr6:59359049-59358878 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 33, 15 |
| Conread position: | 140-316 |
| Cow position: | chr6:23844931-23845107 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 39, 13 |
Show alignments to all cow chromosomes.