Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8052L01.5 |
| Conread position: | 55-309 |
| Cow position: | chr7:68671978-68672226 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 7, 17 |
| Conread position: | 60-283 |
| Cow position: | chr7:43995497-43995274 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 18, 58 |
| Conread position: | 60-305 |
| Cow position: | chr7:43144344-43144095 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 174 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 26, 76 |
| Conread position: | 60-309 |
| Cow position: | chr7:39945569-39945817 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 51, 17 |
| Conread position: | 60-313 |
| Cow position: | chr7:61165171-61164917 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 18, 78 |
| Conread position: | 61-313 |
| Cow position: | chr7:1802169-1801922 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 17, 55 |
| Conread position: | 61-313 |
| Cow position: | chr7:39547958-39548208 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 23, 37 |
| Conread position: | 63-310 |
| Cow position: | chr7:53550173-53549925 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 173 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 15, 33 |
| Conread position: | 69-311 |
| Cow position: | chr7:48278137-48277892 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 9, 60 |
| Conread position: | 77-309 |
| Cow position: | chr7:45136611-45136377 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 33, 44 |
| Conread position: | 77-316 |
| Cow position: | chr7:7585747-7585505 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 34, 40 |
| Conread position: | 83-387 |
| Cow position: | chr7:35414651-35414955 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 74, 13 |
| Conread position: | 85-300 |
| Cow position: | chr7:46009757-46009973 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 75, 114 |
| Conread position: | 85-309 |
| Cow position: | chr7:22726175-22726402 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 87, 66 |
| Conread position: | 120-305 |
| Cow position: | chr7:60762740-60762554 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 59, 28 |
| Conread position: | 127-308 |
| Cow position: | chr7:19878926-19878748 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 146, 24 |
| Conread position: | 127-313 |
| Cow position: | chr7:53580313-53580130 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 47, 127 |
| Conread position: | 128-318 |
| Cow position: | chr7:52604688-52604495 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 39, 75 |
| Conread position: | 156-313 |
| Cow position: | chr7:42532278-42532118 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 160-305 |
| Cow position: | chr7:51305474-51305327 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 20, 0 |
Show alignments to all cow chromosomes.