Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8052L01.5 |
| Conread position: | 34-288 |
| Cow position: | chr9:6722259-6722001 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 185 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 16, 111 |
| Conread position: | 46-308 |
| Cow position: | chr9:61693587-61693852 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 13, 112 |
| Conread position: | 59-314 |
| Cow position: | chr9:54776305-54776564 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 25, 66 |
| Conread position: | 60-313 |
| Cow position: | chr9:46153587-46153839 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 18, 38 |
| Conread position: | 60-313 |
| Cow position: | chr9:56245734-56245483 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 26, 35 |
| Conread position: | 60-319 |
| Cow position: | chr9:46221514-46221775 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 18, 33 |
| Conread position: | 61-309 |
| Cow position: | chr9:13008926-13009174 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 119, 94 |
| Conread position: | 66-305 |
| Cow position: | chr9:27719814-27719570 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 91, 74 |
| Conread position: | 69-310 |
| Cow position: | chr9:7683576-7683822 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 9, 200 |
| Conread position: | 85-306 |
| Cow position: | chr9:9446710-9446931 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 47, 95 |
| Conread position: | 86-308 |
| Cow position: | chr9:49642449-49642660 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 9, 113 |
| Conread position: | 105-313 |
| Cow position: | chr9:30865301-30865091 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 65, 37 |
| Conread position: | 105-322 |
| Cow position: | chr9:13154362-13154578 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 73, 44 |
| Conread position: | 113-309 |
| Cow position: | chr9:19747495-19747296 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 55, 27 |
| Conread position: | 114-319 |
| Cow position: | chr9:23328537-23328331 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 64, 39 |
| Conread position: | 120-313 |
| Cow position: | chr9:43513385-43513185 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 35, 84 |
| Conread position: | 122-313 |
| Cow position: | chr9:39233318-39233511 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 56, 20 |
| Conread position: | 125-313 |
| Cow position: | chr9:18984490-18984679 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 51, 15 |
| Conread position: | 127-310 |
| Cow position: | chr9:45133729-45133550 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 42, 15 |
| Conread position: | 127-313 |
| Cow position: | chr9:8147883-8147696 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 53, 74 |
| Conread position: | 137-351 |
| Cow position: | chr9:15953519-15953733 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 30, 103 |
| Conread position: | 140-304 |
| Cow position: | chr9:16587462-16587296 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 17, 33 |
| Conread position: | 140-308 |
| Cow position: | chr9:47478367-47478538 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 36, 15 |
| Conread position: | 140-313 |
| Cow position: | chr9:40785599-40785422 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 36, 15 |
| Conread position: | 141-308 |
| Cow position: | chr9:24914277-24914112 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 43, 0 |
Show alignments to all cow chromosomes.