Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8052L01.5 |
| Conread position: | 16-313 |
| Cow position: | chrX:35818134-35818437 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 205 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 47, 7 |
| Conread position: | 47-310 |
| Cow position: | chrX:40332327-40332589 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 37, 77 |
| Conread position: | 60-291 |
| Cow position: | chrX:42925284-42925517 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 24, 81 |
| Conread position: | 60-313 |
| Cow position: | chrX:340863-341115 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 24, 75 |
| Conread position: | 60-313 |
| Cow position: | chrX:4334365-4334109 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 17, 83 |
| Conread position: | 60-313 |
| Cow position: | chrX:38168599-38168847 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 24, 86 |
| Conread position: | 63-285 |
| Cow position: | chrX:36881647-36881872 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 21, 80 |
| Conread position: | 63-313 |
| Cow position: | chrX:762926-763168 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 14, 78 |
| Conread position: | 77-313 |
| Cow position: | chrX:37499746-37499982 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 103, 18 |
| Conread position: | 83-354 |
| Cow position: | chrX:32128627-32128893 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 185 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 93, 57 |
| Conread position: | 84-312 |
| Cow position: | chrX:37124084-37123852 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 46, 120 |
| Conread position: | 85-300 |
| Cow position: | chrX:26609508-26609727 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 72, 57 |
| Conread position: | 85-314 |
| Cow position: | chrX:37031921-37032153 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 92, 54 |
| Conread position: | 111-338 |
| Cow position: | chrX:20367499-20367727 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 167 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 59, 29 |
| Conread position: | 125-313 |
| Cow position: | chrX:38199401-38199590 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 53, 15 |
| Conread position: | 127-309 |
| Cow position: | chrX:15275423-15275613 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 23, 16 |
| Conread position: | 129-313 |
| Cow position: | chrX:38374226-38374047 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 51, 36 |
| Conread position: | 130-313 |
| Cow position: | chrX:26003261-26003080 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 28, 62 |
| Conread position: | 138-314 |
| Cow position: | chrX:14745364-14745541 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 38, 15 |
| Conread position: | 144-317 |
| Cow position: | chrX:33187475-33187655 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 36, 11 |
Show alignments to all cow chromosomes.