Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8052L23.3.5 |
| Conread position: | 806-1020 |
| Cow position: | chr10:17371075-17370863 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 19, 8 |
| Conread position: | 808-1167 |
| Cow position: | chr10:60910964-60911300 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 251 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 152, 21 |
| Conread position: | 823-1082 |
| Cow position: | chr10:32622586-32622337 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 150, 41 |
| Conread position: | 823-1166 |
| Cow position: | chr10:55908507-55908840 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 234 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 143, 38 |
| Conread position: | 825-1072 |
| Cow position: | chr10:3363069-3362838 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 204, 26 |
| Conread position: | 825-1110 |
| Cow position: | chr10:15184956-15184677 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 126, 34 |
| Conread position: | 826-1103 |
| Cow position: | chr10:30205406-30205135 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 191 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 153, 34 |
| Conread position: | 826-1109 |
| Cow position: | chr10:500657-500391 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 192 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 826-1109 |
| Cow position: | chr10:47555889-47555609 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 200 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 131, 35 |
| Conread position: | 826-1124 |
| Cow position: | chr10:11187859-11187574 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 202 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 117, 35 |
| Conread position: | 826-1179 |
| Cow position: | chr10:51313541-51313188 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 236 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 223, 35 |
| Conread position: | 827-1024 |
| Cow position: | chr10:54162548-54162354 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 827-1076 |
| Cow position: | chr10:66056003-66056246 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 246, 34 |
| Conread position: | 827-1105 |
| Cow position: | chr10:3945572-3945305 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 827-1106 |
| Cow position: | chr10:68935316-68935587 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 185 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 145, 35 |
| Conread position: | 827-1109 |
| Cow position: | chr10:6906271-6906558 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 200 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 55, 36 |
| Conread position: | 827-1109 |
| Cow position: | chr10:40877541-40877261 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 133, 18 |
| Conread position: | 827-1109 |
| Cow position: | chr10:52987906-52987627 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 8, 33 |
| Conread position: | 827-1122 |
| Cow position: | chr10:23851408-23851117 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 130, 33 |
| Conread position: | 827-1167 |
| Cow position: | chr10:23570401-23570062 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 227 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 120, 24 |
| Conread position: | 827-1188 |
| Cow position: | chr10:49861710-49861355 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 250 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 115, 34 |
| Conread position: | 828-1095 |
| Cow position: | chr10:13416728-13416467 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 9, 15 |
| Conread position: | 828-1201 |
| Cow position: | chr10:13287789-13287403 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 266 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 119, 34 |
| Conread position: | 829-1095 |
| Cow position: | chr10:50094504-50094248 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 192 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 829-1118 |
| Cow position: | chr10:17411880-17412163 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 191 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 118, 32 |
| Conread position: | 829-1153 |
| Cow position: | chr10:10514792-10514461 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 231 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 163, 31 |
| Conread position: | 829-1154 |
| Cow position: | chr10:45352171-45351836 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 222 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 267, 22 |
| Conread position: | 829-1155 |
| Cow position: | chr10:33034616-33034940 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 230 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 126, 22 |
| Conread position: | 829-1167 |
| Cow position: | chr10:9640412-9640748 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 235 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 144, 33 |
| Conread position: | 833-1106 |
| Cow position: | chr10:20922062-20922328 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 840-1114 |
| Cow position: | chr10:50579680-50579945 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 178, 21 |
| Conread position: | 840-1167 |
| Cow position: | chr10:13212434-13212746 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 34, 22 |
| Conread position: | 844-1095 |
| Cow position: | chr10:22419741-22419493 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 112, 11 |
| Conread position: | 856-1158 |
| Cow position: | chr10:13086110-13085807 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 9, 95 |
| Conread position: | 857-1093 |
| Cow position: | chr10:13428840-13428602 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 173 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 16, 7 |
| Conread position: | 859-1095 |
| Cow position: | chr10:29726546-29726310 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 129, 12 |
| Conread position: | 863-1169 |
| Cow position: | chr10:56976465-56976176 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 864-1092 |
| Cow position: | chr10:47189868-47190096 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 93, 27 |
| Conread position: | 864-1105 |
| Cow position: | chr10:63249373-63249610 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 131, 22 |
| Conread position: | 868-1103 |
| Cow position: | chr10:49685778-49685546 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 82, 18 |
| Conread position: | 869-1109 |
| Cow position: | chr10:28703007-28702770 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 75, 54 |
| Conread position: | 870-1109 |
| Cow position: | chr10:9559825-9559588 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 78, 16 |
| Conread position: | 873-1155 |
| Cow position: | chr10:476237-475967 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 198 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 875-1118 |
| Cow position: | chr10:52612720-52612481 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 83, 12 |
| Conread position: | 1735-1949 |
| Cow position: | chr10:7383411-7383622 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 134, 25 |
| Conread position: | 1750-1954 |
| Cow position: | chr10:25822063-25822256 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 1755-1949 |
| Cow position: | chr10:61509754-61509952 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 14, 91 |
| Conread position: | 1760-1949 |
| Cow position: | chr10:46799324-46799133 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 23, 53 |
| Conread position: | 1764-1953 |
| Cow position: | chr10:41676232-41676422 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 17, 90 |
| Conread position: | 1780-1941 |
| Cow position: | chr10:22390760-22390596 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 81, 102 |
| Conread position: | 1780-1941 |
| Cow position: | chr10:39124299-39124132 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 1780-1945 |
| Cow position: | chr10:1978508-1978676 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 1780-1948 |
| Cow position: | chr10:59455525-59455366 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 1780-1949 |
| Cow position: | chr10:9575885-9576057 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 1780-1949 |
| Cow position: | chr10:17150036-17149871 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 74, 44 |
| Conread position: | 1780-1949 |
| Cow position: | chr10:60697465-60697632 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 75, 146 |
| Conread position: | 1782-1936 |
| Cow position: | chr10:49862625-49862470 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 81, 97 |
| Conread position: | 1782-1942 |
| Cow position: | chr10:6490040-6489870 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 69, 84 |
| Conread position: | 1786-1935 |
| Cow position: | chr10:54848935-54848783 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 74, 0 |
Show alignments to all cow chromosomes.