Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8052L23.3.5 |
| Conread position: | 821-1170 |
| Cow position: | chr12:24961201-24960843 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 244 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 176, 40 |
| Conread position: | 822-1110 |
| Cow position: | chr12:27485538-27485251 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 128, 7 |
| Conread position: | 823-1091 |
| Cow position: | chr12:8461254-8460988 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 42, 24 |
| Conread position: | 826-1098 |
| Cow position: | chr12:15252562-15252297 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 201 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 127, 13 |
| Conread position: | 826-1113 |
| Cow position: | chr12:16918755-16918479 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 826-1116 |
| Cow position: | chr12:17121174-17121451 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 128, 35 |
| Conread position: | 826-1164 |
| Cow position: | chr12:19426944-19427299 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 148, 25 |
| Conread position: | 826-1167 |
| Cow position: | chr12:33257759-33257414 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 243 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 134, 36 |
| Conread position: | 827-1013 |
| Cow position: | chr12:23846764-23846585 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 827-1095 |
| Cow position: | chr12:33089211-33089478 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 105, 27 |
| Conread position: | 827-1104 |
| Cow position: | chr12:3993103-3992827 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 204 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 133, 33 |
| Conread position: | 827-1109 |
| Cow position: | chr12:6393308-6393591 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 77, 34 |
| Conread position: | 827-1109 |
| Cow position: | chr12:10252951-10253225 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 124, 34 |
| Conread position: | 827-1109 |
| Cow position: | chr12:12792668-12792394 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 128, 8 |
| Conread position: | 827-1109 |
| Cow position: | chr12:26548841-26549115 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 72, 8 |
| Conread position: | 827-1152 |
| Cow position: | chr12:40291261-40291587 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 222 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 165, 32 |
| Conread position: | 827-1167 |
| Cow position: | chr12:6803783-6803450 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 159, 35 |
| Conread position: | 829-1072 |
| Cow position: | chr12:5196833-5197067 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 126, 25 |
| Conread position: | 829-1109 |
| Cow position: | chr12:14316964-14316687 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 163, 32 |
| Conread position: | 829-1109 |
| Cow position: | chr12:33483495-33483770 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 145, 33 |
| Conread position: | 848-1132 |
| Cow position: | chr12:31306984-31306690 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 21, 41 |
| Conread position: | 865-1118 |
| Cow position: | chr12:38179185-38179434 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 83, 21 |
| Conread position: | 866-1183 |
| Cow position: | chr12:9591573-9591899 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 230 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 166, 55 |
| Conread position: | 868-1109 |
| Cow position: | chr12:14540964-14541206 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 105, 87 |
| Conread position: | 868-1119 |
| Cow position: | chr12:14771204-14771453 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 124, 18 |
| Conread position: | 903-1110 |
| Cow position: | chr12:24687168-24686959 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 52, 19 |
| Conread position: | 1716-1949 |
| Cow position: | chr12:22284900-22285145 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 36, 23 |
| Conread position: | 1721-1941 |
| Cow position: | chr12:19261400-19261180 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 123, 25 |
| Conread position: | 1751-1928 |
| Cow position: | chr12:22048101-22047919 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 125, 29 |
| Conread position: | 1760-1952 |
| Cow position: | chr12:7902632-7902825 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 21, 110 |
| Conread position: | 1780-1949 |
| Cow position: | chr12:14986897-14986726 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 82, 101 |
Show alignments to all cow chromosomes.