Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8052L23.3.5 |
| Conread position: | 824-1149 |
| Cow position: | chr13:57389877-57390201 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 119, 42 |
| Conread position: | 826-1095 |
| Cow position: | chr13:2935301-2935561 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 827-1055 |
| Cow position: | chr13:13788910-13788687 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 92, 33 |
| Conread position: | 827-1056 |
| Cow position: | chr13:49032349-49032574 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 120, 44 |
| Conread position: | 827-1094 |
| Cow position: | chr13:3176639-3176374 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 102, 33 |
| Conread position: | 827-1109 |
| Cow position: | chr13:46256901-46256622 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 145, 34 |
| Conread position: | 827-1109 |
| Cow position: | chr13:48352867-48352591 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 190 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 133, 27 |
| Conread position: | 827-1119 |
| Cow position: | chr13:7235889-7236175 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 210 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 129, 35 |
| Conread position: | 827-1149 |
| Cow position: | chr13:5968952-5969273 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 216 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 269, 36 |
| Conread position: | 827-1167 |
| Cow position: | chr13:18605942-18606274 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 232 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 277, 33 |
| Conread position: | 827-1192 |
| Cow position: | chr13:38992180-38992541 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 249 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 129, 24 |
| Conread position: | 828-1181 |
| Cow position: | chr13:29192440-29192079 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 261 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 127, 33 |
| Conread position: | 829-1060 |
| Cow position: | chr13:37626912-37626688 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 139, 30 |
| Conread position: | 829-1109 |
| Cow position: | chr13:6018575-6018854 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 33, 66 |
| Conread position: | 830-1103 |
| Cow position: | chr13:15811969-15812240 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 188 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 122, 31 |
| Conread position: | 832-1118 |
| Cow position: | chr13:18310519-18310236 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 7, 33 |
| Conread position: | 839-1106 |
| Cow position: | chr13:16964581-16964315 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 118, 23 |
| Conread position: | 841-1177 |
| Cow position: | chr13:15869774-15870113 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 154, 20 |
| Conread position: | 855-1095 |
| Cow position: | chr13:15984195-15983961 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 863-1167 |
| Cow position: | chr13:17701203-17701497 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 97, 22 |
| Conread position: | 864-1095 |
| Cow position: | chr13:27676738-27676513 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 93, 13 |
| Conread position: | 866-1178 |
| Cow position: | chr13:17564495-17564828 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 231 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 90, 20 |
| Conread position: | 867-1109 |
| Cow position: | chr13:47567271-47567510 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 106, 26 |
| Conread position: | 871-1149 |
| Cow position: | chr13:28799479-28799202 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 111, 50 |
| Conread position: | 874-1154 |
| Cow position: | chr13:40915848-40915559 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 118, 12 |
| Conread position: | 922-1153 |
| Cow position: | chr13:15967660-15967882 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 35, 45 |
| Conread position: | 1732-1949 |
| Cow position: | chr13:20217641-20217428 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 128, 15 |
| Conread position: | 1747-1949 |
| Cow position: | chr13:56535230-56535423 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 34, 13 |
| Conread position: | 1748-1949 |
| Cow position: | chr13:14063756-14063551 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 1749-1948 |
| Cow position: | chr13:18058478-18058281 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 115, 31 |
| Conread position: | 1750-1954 |
| Cow position: | chr13:17611785-17611577 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 36, 124 |
| Conread position: | 1760-1928 |
| Cow position: | chr13:20520088-20520264 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 1766-1948 |
| Cow position: | chr13:3153531-3153719 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 1780-1941 |
| Cow position: | chr13:20784392-20784552 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 80, 70 |
| Conread position: | 1780-1949 |
| Cow position: | chr13:33854883-33854714 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 96, 20 |
| Conread position: | 1782-1952 |
| Cow position: | chr13:19022064-19022244 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 1785-1948 |
| Cow position: | chr13:15194918-15194766 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 45, 0 |
Show alignments to all cow chromosomes.