Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8052L23.3.5 |
| Conread position: | 803-1182 |
| Cow position: | chr17:15846136-15845756 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 274 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 168, 23 |
| Conread position: | 823-1169 |
| Cow position: | chr17:26188558-26188885 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 238 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 122, 39 |
| Conread position: | 825-1160 |
| Cow position: | chr17:14826107-14826438 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 170, 28 |
| Conread position: | 826-1094 |
| Cow position: | chr17:26062330-26062063 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 118, 35 |
| Conread position: | 826-1095 |
| Cow position: | chr17:43454060-43454325 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 16, 36 |
| Conread position: | 826-1109 |
| Cow position: | chr17:19530309-19530592 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 118, 35 |
| Conread position: | 827-1073 |
| Cow position: | chr17:30002443-30002199 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 139, 35 |
| Conread position: | 827-1109 |
| Cow position: | chr17:37399339-37399613 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 129, 34 |
| Conread position: | 829-1094 |
| Cow position: | chr17:8698621-8698885 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 180 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 110, 32 |
| Conread position: | 829-1109 |
| Cow position: | chr17:19091881-19091602 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 147, 30 |
| Conread position: | 831-1106 |
| Cow position: | chr17:33245075-33244813 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 8, 31 |
| Conread position: | 831-1158 |
| Cow position: | chr17:30251522-30251834 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 230 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 109, 29 |
| Conread position: | 834-1149 |
| Cow position: | chr17:32693654-32693341 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 55, 34 |
| Conread position: | 837-1167 |
| Cow position: | chr17:28586295-28586640 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 237 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 119, 24 |
| Conread position: | 838-1113 |
| Cow position: | chr17:21337833-21337561 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 114, 16 |
| Conread position: | 855-1119 |
| Cow position: | chr17:18400008-18400266 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 99, 15 |
| Conread position: | 864-1109 |
| Cow position: | chr17:39612254-39612491 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 128, 105 |
| Conread position: | 865-1109 |
| Cow position: | chr17:23429610-23429847 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 127, 57 |
| Conread position: | 866-1179 |
| Cow position: | chr17:15738698-15738399 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 103, 55 |
| Conread position: | 868-1104 |
| Cow position: | chr17:2526360-2526122 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 76, 108 |
| Conread position: | 884-1109 |
| Cow position: | chr17:25358378-25358155 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 73, 95 |
| Conread position: | 1712-1945 |
| Cow position: | chr17:21718702-21718937 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 52, 15 |
| Conread position: | 1713-1949 |
| Cow position: | chr17:5422782-5423013 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 173 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 25, 18 |
| Conread position: | 1731-1949 |
| Cow position: | chr17:26818191-26818402 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 17, 34 |
| Conread position: | 1738-1948 |
| Cow position: | chr17:25126612-25126407 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 113, 7 |
| Conread position: | 1750-1941 |
| Cow position: | chr17:33154898-33155091 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 31, 125 |
| Conread position: | 1750-1953 |
| Cow position: | chr17:3387978-3387769 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 1768-1949 |
| Cow position: | chr17:12536232-12536409 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 12, 75 |
| Conread position: | 1768-1949 |
| Cow position: | chr17:33933509-33933689 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 134, 16 |
| Conread position: | 1780-1941 |
| Cow position: | chr17:32138187-32138360 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 128 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 1780-1949 |
| Cow position: | chr17:946585-946413 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 1780-1949 |
| Cow position: | chr17:21677120-21676946 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 1780-1949 |
| Cow position: | chr17:40412808-40412639 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1781-1951 |
| Cow position: | chr17:7711664-7711491 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 83, 61 |
| Conread position: | 1782-1948 |
| Cow position: | chr17:12325543-12325708 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 89, 48 |
Show alignments to all cow chromosomes.