Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8052L23.3.5 |
| Conread position: | 823-1109 |
| Cow position: | chr19:28945195-28945462 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 150, 39 |
| Conread position: | 824-1113 |
| Cow position: | chr19:43376717-43376433 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 198, 26 |
| Conread position: | 825-1118 |
| Cow position: | chr19:33716135-33716414 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 59, 36 |
| Conread position: | 826-1152 |
| Cow position: | chr19:36666032-36665691 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 238 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 169, 40 |
| Conread position: | 826-1167 |
| Cow position: | chr19:54406966-54407317 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 253 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 62, 35 |
| Conread position: | 827-1104 |
| Cow position: | chr19:23823533-23823263 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 152, 34 |
| Conread position: | 827-1109 |
| Cow position: | chr19:44572420-44572692 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 201 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 213, 34 |
| Conread position: | 829-1158 |
| Cow position: | chr19:46776444-46776125 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 225 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 9, 33 |
| Conread position: | 830-1109 |
| Cow position: | chr19:25841309-25841039 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 123, 31 |
| Conread position: | 833-1094 |
| Cow position: | chr19:31785200-31785454 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 121, 26 |
| Conread position: | 835-954 |
| Cow position: | chr19:9113143-9113026 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 844-1154 |
| Cow position: | chr19:9199481-9199168 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 224 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 28, 129 |
| Conread position: | 855-1109 |
| Cow position: | chr19:8530865-8530619 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 174, 77 |
| Conread position: | 875-1096 |
| Cow position: | chr19:52282326-52282108 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 85, 11 |
| Conread position: | 880-1109 |
| Cow position: | chr19:1174242-1174017 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 884-1095 |
| Cow position: | chr19:52286091-52286308 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 87, 79 |
| Conread position: | 901-1120 |
| Cow position: | chr19:38237454-38237237 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 91, 128 |
| Conread position: | 1731-1949 |
| Cow position: | chr19:23889263-23889483 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 8, 25 |
| Conread position: | 1748-1944 |
| Cow position: | chr19:22871047-22871248 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 13, 7 |
| Conread position: | 1757-1941 |
| Cow position: | chr19:33988268-33988082 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 104, 25 |
| Conread position: | 1760-1950 |
| Cow position: | chr19:41497448-41497643 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 90, 21 |
| Conread position: | 1780-1941 |
| Cow position: | chr19:40126988-40127154 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 1780-1945 |
| Cow position: | chr19:34420586-34420417 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 59, 102 |
| Conread position: | 1780-1947 |
| Cow position: | chr19:42767926-42768091 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 1780-1949 |
| Cow position: | chr19:38732315-38732143 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 81, 111 |
| Conread position: | 1780-1951 |
| Cow position: | chr19:37067310-37067142 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 1781-1948 |
| Cow position: | chr19:21378290-21378464 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 1781-1949 |
| Cow position: | chr19:19916247-19916416 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 52, 89 |
Show alignments to all cow chromosomes.