Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8052L23.3.5 |
| Conread position: | 815-1059 |
| Cow position: | chr20:39994250-39994012 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 142, 47 |
| Conread position: | 822-1109 |
| Cow position: | chr20:22884462-22884173 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 195 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 141, 44 |
| Conread position: | 822-1160 |
| Cow position: | chr20:21428938-21428613 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 196, 39 |
| Conread position: | 822-1184 |
| Cow position: | chr20:3800764-3800392 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 260 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 99, 6 |
| Conread position: | 826-1019 |
| Cow position: | chr20:17103305-17103114 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 89, 37 |
| Conread position: | 826-1095 |
| Cow position: | chr20:14408410-14408148 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 102, 35 |
| Conread position: | 826-1109 |
| Cow position: | chr20:8265002-8264731 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 197, 38 |
| Conread position: | 826-1113 |
| Cow position: | chr20:27352441-27352159 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 129, 36 |
| Conread position: | 826-1180 |
| Cow position: | chr20:27479026-27479361 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 240 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 322, 33 |
| Conread position: | 829-1106 |
| Cow position: | chr20:22229250-22229525 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 118, 31 |
| Conread position: | 829-1113 |
| Cow position: | chr20:23635315-23635041 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 197 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 129, 35 |
| Conread position: | 829-1158 |
| Cow position: | chr20:26063845-26064188 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 137, 33 |
| Conread position: | 829-1168 |
| Cow position: | chr20:21298867-21298523 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 236 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 128, 33 |
| Conread position: | 830-1095 |
| Cow position: | chr20:13155987-13156242 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 830-1109 |
| Cow position: | chr20:33809700-33809975 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 111, 31 |
| Conread position: | 830-1109 |
| Cow position: | chr20:36738479-36738204 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 186 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 143, 30 |
| Conread position: | 830-1160 |
| Cow position: | chr20:14122742-14123089 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 236 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 94, 36 |
| Conread position: | 830-1178 |
| Cow position: | chr20:37458743-37458393 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 243 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 117, 31 |
| Conread position: | 831-1105 |
| Cow position: | chr20:18556005-18555734 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 125, 29 |
| Conread position: | 831-1109 |
| Cow position: | chr20:17637394-17637675 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 196 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 117, 33 |
| Conread position: | 838-1179 |
| Cow position: | chr20:1274576-1274916 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 235, 22 |
| Conread position: | 843-1163 |
| Cow position: | chr20:5805528-5805853 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 225 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 242, 18 |
| Conread position: | 855-1111 |
| Cow position: | chr20:22317571-22317317 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 10, 114 |
| Conread position: | 856-1094 |
| Cow position: | chr20:33222409-33222185 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 864-1109 |
| Cow position: | chr20:5085686-5085445 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 88, 75 |
| Conread position: | 864-1109 |
| Cow position: | chr20:10585522-10585763 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 128, 22 |
| Conread position: | 864-1167 |
| Cow position: | chr20:33344388-33344071 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 83, 56 |
| Conread position: | 875-1156 |
| Cow position: | chr20:14441190-14440912 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 188 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 117, 87 |
| Conread position: | 876-1105 |
| Cow position: | chr20:25290072-25290302 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 80, 91 |
| Conread position: | 897-1156 |
| Cow position: | chr20:763841-764094 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 55, 69 |
| Conread position: | 1739-1949 |
| Cow position: | chr20:8555998-8556211 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 18, 43 |
| Conread position: | 1745-1949 |
| Cow position: | chr20:14807153-14806945 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 6, 138 |
| Conread position: | 1748-1949 |
| Cow position: | chr20:1640206-1640395 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 1760-1945 |
| Cow position: | chr20:5702973-5702786 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 63, 80 |
| Conread position: | 1764-1949 |
| Cow position: | chr20:4891873-4892061 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 98, 16 |
| Conread position: | 1775-1947 |
| Cow position: | chr20:28982934-28982762 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 58, 100 |
| Conread position: | 1779-1951 |
| Cow position: | chr20:2819780-2819599 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 1780-1942 |
| Cow position: | chr20:12581725-12581889 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 1780-1949 |
| Cow position: | chr20:3255265-3255094 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 1780-1949 |
| Cow position: | chr20:25009402-25009574 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 75, 0 |
Show alignments to all cow chromosomes.