Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8052L23.3.5 |
| Conread position: | 821-1109 |
| Cow position: | chr23:7959827-7959543 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 7, 98 |
| Conread position: | 826-1095 |
| Cow position: | chr23:29313104-29312854 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 120, 33 |
| Conread position: | 827-1071 |
| Cow position: | chr23:7606463-7606223 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 77, 19 |
| Conread position: | 827-1106 |
| Cow position: | chr23:16849285-16849557 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 262, 24 |
| Conread position: | 827-1118 |
| Cow position: | chr23:37637978-37637681 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 127, 8 |
| Conread position: | 827-1159 |
| Cow position: | chr23:31598623-31598940 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 165, 36 |
| Conread position: | 827-1167 |
| Cow position: | chr23:16384575-16384924 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 246 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 160, 32 |
| Conread position: | 827-1167 |
| Cow position: | chr23:36605516-36605855 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 237 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 127, 35 |
| Conread position: | 827-1178 |
| Cow position: | chr23:40642982-40643353 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 255 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 117, 37 |
| Conread position: | 829-1025 |
| Cow position: | chr23:4770657-4770849 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 163, 31 |
| Conread position: | 829-1038 |
| Cow position: | chr23:20811969-20812174 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 144, 31 |
| Conread position: | 829-1109 |
| Cow position: | chr23:22405531-22405273 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 200 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 831-1169 |
| Cow position: | chr23:8242644-8242987 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 233 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 129, 33 |
| Conread position: | 832-1109 |
| Cow position: | chr23:13659751-13659477 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 119, 29 |
| Conread position: | 835-1020 |
| Cow position: | chr23:16030576-16030394 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 125, 25 |
| Conread position: | 847-1186 |
| Cow position: | chr23:37627799-37627444 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 242 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 18, 91 |
| Conread position: | 864-1158 |
| Cow position: | chr23:14167955-14168243 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 204 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 119, 57 |
| Conread position: | 868-1110 |
| Cow position: | chr23:21555926-21556160 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 143, 54 |
| Conread position: | 871-1109 |
| Cow position: | chr23:14767322-14767088 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 6, 27 |
| Conread position: | 874-1080 |
| Cow position: | chr23:37450774-37450567 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 84, 73 |
| Conread position: | 884-1181 |
| Cow position: | chr23:14128990-14129299 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 111, 60 |
| Conread position: | 978-1158 |
| Cow position: | chr23:40571468-40571655 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 57, 48 |
| Conread position: | 1732-1949 |
| Cow position: | chr23:20539616-20539403 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 18, 28 |
| Conread position: | 1738-1968 |
| Cow position: | chr23:24718567-24718802 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 42, 227 |
| Conread position: | 1739-1949 |
| Cow position: | chr23:12363385-12363600 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 42, 19 |
| Conread position: | 1739-1949 |
| Cow position: | chr23:27849221-27849014 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 112, 11 |
| Conread position: | 1750-1949 |
| Cow position: | chr23:7155478-7155675 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 31, 14 |
| Conread position: | 1754-1942 |
| Cow position: | chr23:23104275-23104462 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 106, 26 |
| Conread position: | 1760-1944 |
| Cow position: | chr23:16664194-16664379 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 118, 20 |
| Conread position: | 1760-1947 |
| Cow position: | chr23:1877683-1877876 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 21, 125 |
| Conread position: | 1760-1948 |
| Cow position: | chr23:1883602-1883413 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 105, 24 |
| Conread position: | 1780-1946 |
| Cow position: | chr23:5426628-5426454 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 1780-1948 |
| Cow position: | chr23:24809246-24809419 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 126 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 82, 152 |
| Conread position: | 1780-1949 |
| Cow position: | chr23:534417-534245 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 1780-1949 |
| Cow position: | chr23:1194304-1194474 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 126 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 66, 88 |
| Conread position: | 1780-1949 |
| Cow position: | chr23:2501666-2501836 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 89, 100 |
| Conread position: | 1780-1949 |
| Cow position: | chr23:9131773-9131943 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 97, 39 |
| Conread position: | 1780-1949 |
| Cow position: | chr23:24509875-24509712 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 112, 56 |
Show alignments to all cow chromosomes.