Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8052L23.3.5 |
| Conread position: | 793-1155 |
| Cow position: | chr25:18919316-18919683 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 242 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 17, 54 |
| Conread position: | 823-1062 |
| Cow position: | chr25:15424104-15424334 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 133, 21 |
| Conread position: | 823-1118 |
| Cow position: | chr25:24731411-24731119 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 5, 40 |
| Conread position: | 826-1072 |
| Cow position: | chr25:8941250-8941010 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 94, 36 |
| Conread position: | 826-1150 |
| Cow position: | chr25:26777921-26777586 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 228 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 48, 34 |
| Conread position: | 827-1051 |
| Cow position: | chr25:8420471-8420695 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 130, 28 |
| Conread position: | 827-1094 |
| Cow position: | chr25:14508302-14508567 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 181 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 165, 35 |
| Conread position: | 827-1109 |
| Cow position: | chr25:15236505-15236233 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 198, 35 |
| Conread position: | 827-1109 |
| Cow position: | chr25:16943971-16944240 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 202 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 130, 35 |
| Conread position: | 827-1167 |
| Cow position: | chr25:2393697-2394018 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 231 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 321, 34 |
| Conread position: | 827-1167 |
| Cow position: | chr25:8527553-8527192 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 251 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 114, 35 |
| Conread position: | 828-1094 |
| Cow position: | chr25:12169537-12169278 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 135, 26 |
| Conread position: | 829-1089 |
| Cow position: | chr25:28598501-28598753 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 71, 30 |
| Conread position: | 829-1093 |
| Cow position: | chr25:11574750-11575005 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 126, 33 |
| Conread position: | 829-1106 |
| Cow position: | chr25:33514549-33514283 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 127, 32 |
| Conread position: | 829-1109 |
| Cow position: | chr25:11901559-11901840 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 131, 31 |
| Conread position: | 830-1106 |
| Cow position: | chr25:15271046-15270772 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 192 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 115, 32 |
| Conread position: | 830-1109 |
| Cow position: | chr25:16905004-16905279 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 123, 31 |
| Conread position: | 836-1106 |
| Cow position: | chr25:11348473-11348208 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 229, 25 |
| Conread position: | 838-1012 |
| Cow position: | chr25:36361057-36360888 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 854-1185 |
| Cow position: | chr25:36530265-36529928 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 223 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 115, 10 |
| Conread position: | 865-1106 |
| Cow position: | chr25:12646854-12647091 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 171 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 127, 61 |
| Conread position: | 866-1167 |
| Cow position: | chr25:5130549-5130245 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 89, 101 |
| Conread position: | 871-1168 |
| Cow position: | chr25:13698961-13699265 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 112, 50 |
| Conread position: | 874-1104 |
| Cow position: | chr25:6866674-6866908 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 118, 8 |
| Conread position: | 877-1109 |
| Cow position: | chr25:30574178-30574411 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 36, 73 |
| Conread position: | 883-1095 |
| Cow position: | chr25:15734039-15734248 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 90, 11 |
| Conread position: | 991-1181 |
| Cow position: | chr25:428829-429013 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 1734-1947 |
| Cow position: | chr25:11432720-11432930 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 141, 0 |
| Conread position: | 1750-1946 |
| Cow position: | chr25:18934418-18934618 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 31, 186 |
| Conread position: | 1751-1951 |
| Cow position: | chr25:31657068-31657266 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 99, 13 |
| Conread position: | 1758-1947 |
| Cow position: | chr25:19679560-19679370 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 1758-1949 |
| Cow position: | chr25:11060341-11060145 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 77, 22 |
| Conread position: | 1760-1949 |
| Cow position: | chr25:18810535-18810356 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 1766-1952 |
| Cow position: | chr25:13223101-13222910 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 1780-1941 |
| Cow position: | chr25:26306017-26306183 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 97, 62 |
| Conread position: | 1780-1949 |
| Cow position: | chr25:20203094-20202926 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 91, 59 |
| Conread position: | 1780-1949 |
| Cow position: | chr25:22298818-22298650 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 1781-1949 |
| Cow position: | chr25:2624979-2624809 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 94, 145 |
| Conread position: | 1781-1949 |
| Cow position: | chr25:19363875-19364046 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 123 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 79, 95 |
| Conread position: | 1787-1948 |
| Cow position: | chr25:23244825-23244988 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 66, 0 |
Show alignments to all cow chromosomes.