Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8052L23.3.5 |
| Conread position: | 825-1094 |
| Cow position: | chr28:18589669-18589408 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 187 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 165, 36 |
| Conread position: | 827-1012 |
| Cow position: | chr28:21038576-21038394 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 77, 34 |
| Conread position: | 827-1042 |
| Cow position: | chr28:25297-25505 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 827-1095 |
| Cow position: | chr28:1831882-1832139 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 192 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 114, 35 |
| Conread position: | 827-1109 |
| Cow position: | chr28:30970745-30970472 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 113, 34 |
| Conread position: | 827-1114 |
| Cow position: | chr28:20362722-20362994 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 195 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 133, 34 |
| Conread position: | 827-1149 |
| Cow position: | chr28:11481644-11481970 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 129, 32 |
| Conread position: | 827-1150 |
| Cow position: | chr28:18455397-18455709 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 208, 7 |
| Conread position: | 827-1167 |
| Cow position: | chr28:14671911-14672248 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 245 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 202, 34 |
| Conread position: | 827-1179 |
| Cow position: | chr28:34632639-34632984 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 240 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 146, 35 |
| Conread position: | 828-1118 |
| Cow position: | chr28:23602698-23602974 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 194 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 128, 33 |
| Conread position: | 829-1109 |
| Cow position: | chr28:6227556-6227835 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 163, 30 |
| Conread position: | 829-1109 |
| Cow position: | chr28:19140542-19140812 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 125, 31 |
| Conread position: | 829-1167 |
| Cow position: | chr28:27242710-27242377 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 163, 32 |
| Conread position: | 829-1180 |
| Cow position: | chr28:2866007-2866349 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 233 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 144, 33 |
| Conread position: | 830-1109 |
| Cow position: | chr28:30984674-30984404 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 110, 30 |
| Conread position: | 859-1095 |
| Cow position: | chr28:16995693-16995930 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 12, 62 |
| Conread position: | 864-1095 |
| Cow position: | chr28:10501728-10501501 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 157 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 192, 35 |
| Conread position: | 869-1109 |
| Cow position: | chr28:7764482-7764245 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 161 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 123, 94 |
| Conread position: | 910-1106 |
| Cow position: | chr28:14990619-14990423 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 48, 62 |
| Conread position: | 1701-1947 |
| Cow position: | chr28:8304514-8304270 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 80, 8 |
| Conread position: | 1720-1949 |
| Cow position: | chr28:7350904-7350674 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 61, 15 |
| Conread position: | 1728-1949 |
| Cow position: | chr28:7557480-7557714 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 1729-1949 |
| Cow position: | chr28:6975478-6975261 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 52, 34 |
| Conread position: | 1750-1951 |
| Cow position: | chr28:21845172-21844975 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 108, 30 |
| Conread position: | 1751-1934 |
| Cow position: | chr28:29988883-29989075 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 29, 95 |
| Conread position: | 1780-1944 |
| Cow position: | chr28:8936341-8936175 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 1780-1945 |
| Cow position: | chr28:3678552-3678386 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 71, 90 |
| Conread position: | 1780-1945 |
| Cow position: | chr28:5074328-5074484 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 1780-1948 |
| Cow position: | chr28:9109404-9109237 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 93, 53 |
| Conread position: | 1780-1949 |
| Cow position: | chr28:4013276-4013104 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 1780-1949 |
| Cow position: | chr28:24082463-24082290 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 1782-1934 |
| Cow position: | chr28:17740016-17739857 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 83, 0 |
Show alignments to all cow chromosomes.