Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8052L23.3.5 |
| Conread position: | 824-1152 |
| Cow position: | chr29:17694980-17694655 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 229 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 145, 30 |
| Conread position: | 827-1095 |
| Cow position: | chr29:12402975-12402715 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 128, 42 |
| Conread position: | 827-1095 |
| Cow position: | chr29:23144787-23144525 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 133, 35 |
| Conread position: | 827-1114 |
| Cow position: | chr29:4853510-4853801 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 118, 34 |
| Conread position: | 827-1144 |
| Cow position: | chr29:5607921-5607619 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 225 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 827-1159 |
| Cow position: | chr29:29736857-29737199 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 231 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 117, 18 |
| Conread position: | 829-945 |
| Cow position: | chr29:31800001-31800115 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 95 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 829-1094 |
| Cow position: | chr29:39222108-39222370 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 92, 32 |
| Conread position: | 831-1118 |
| Cow position: | chr29:18436331-18436055 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 201 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 127, 29 |
| Conread position: | 855-1109 |
| Cow position: | chr29:11356214-11355965 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 102, 33 |
| Conread position: | 857-1176 |
| Cow position: | chr29:22562968-22563292 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 135, 7 |
| Conread position: | 859-1136 |
| Cow position: | chr29:27483679-27483947 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 215, 5 |
| Conread position: | 864-1109 |
| Cow position: | chr29:480621-480374 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 105, 83 |
| Conread position: | 868-1064 |
| Cow position: | chr29:8206941-8207138 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 87, 99 |
| Conread position: | 868-1189 |
| Cow position: | chr29:15600655-15600324 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 223 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 83, 71 |
| Conread position: | 875-1109 |
| Cow position: | chr29:18590551-18590783 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 117, 72 |
| Conread position: | 1731-1949 |
| Cow position: | chr29:40350846-40351062 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 36, 24 |
| Conread position: | 1760-1949 |
| Cow position: | chr29:22162054-22162236 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 21, 43 |
| Conread position: | 1763-1949 |
| Cow position: | chr29:32197896-32197710 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 99, 9 |
| Conread position: | 1769-1948 |
| Cow position: | chr29:4423252-4423425 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 1782-1949 |
| Cow position: | chr29:19363893-19363724 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 79, 144 |
| Conread position: | 1782-1949 |
| Cow position: | chr29:36531051-36530880 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 121 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 1786-1949 |
| Cow position: | chr29:23825031-23825197 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 55, 0 |
Show alignments to all cow chromosomes.