Cow genome map
Conread name: | Ss1.1-Pig4-TMW8052L23.3.5 |
Conread position: | 802-1091 |
Cow position: | chrX:24436748-24437035 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 200 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 119, 19 |
Conread position: | 804-1153 |
Cow position: | chrX:2713961-2713625 (view UCSC Genome Browser custom track) |
Alignm length: | 355 |
Alignm identity: | 232 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 197, 12 |
Conread position: | 817-1063 |
Cow position: | chrX:38206768-38207018 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 174 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 139, 34 |
Conread position: | 819-1093 |
Cow position: | chrX:31265816-31266084 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 178 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 141, 43 |
Conread position: | 820-951 |
Cow position: | chrX:41243609-41243482 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 103 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 822-1032 |
Cow position: | chrX:6083721-6083519 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 148 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 159, 7 |
Conread position: | 823-1118 |
Cow position: | chrX:17621768-17622060 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 206 |
Alignm E-value: | 8e-30 |
Alignm gaps (pig, cow): | 82, 36 |
Conread position: | 824-1167 |
Cow position: | chrX:34795173-34795527 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 246 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 149, 38 |
Conread position: | 825-1109 |
Cow position: | chrX:38414245-38413955 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 201 |
Alignm E-value: | 6e-28 |
Alignm gaps (pig, cow): | 59, 36 |
Conread position: | 826-939 |
Cow position: | chrX:29534374-29534264 (view UCSC Genome Browser custom track) |
Alignm length: | 114 |
Alignm identity: | 92 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 826-1065 |
Cow position: | chrX:32030613-32030378 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 171 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 166, 26 |
Conread position: | 826-1095 |
Cow position: | chrX:29475691-29475951 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 189 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 134, 35 |
Conread position: | 826-1113 |
Cow position: | chrX:4606677-4606966 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 204 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 78, 35 |
Conread position: | 826-1156 |
Cow position: | chrX:16765852-16765529 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 222 |
Alignm E-value: | 7e-29 |
Alignm gaps (pig, cow): | 134, 33 |
Conread position: | 826-1171 |
Cow position: | chrX:27379356-27379702 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 233 |
Alignm E-value: | 7e-29 |
Alignm gaps (pig, cow): | 147, 121 |
Conread position: | 827-987 |
Cow position: | chrX:35228536-35228380 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 117 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 827-1082 |
Cow position: | chrX:13231245-13231494 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 175 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 133, 34 |
Conread position: | 827-1095 |
Cow position: | chrX:39878375-39878106 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 191 |
Alignm E-value: | 6e-28 |
Alignm gaps (pig, cow): | 120, 24 |
Conread position: | 827-1095 |
Cow position: | chrX:41241100-41241351 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 183 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 827-1105 |
Cow position: | chrX:33779734-33779458 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 182 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 165, 32 |
Conread position: | 827-1109 |
Cow position: | chrX:4085069-4084801 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 195 |
Alignm E-value: | 6e-28 |
Alignm gaps (pig, cow): | 146, 32 |
Conread position: | 827-1109 |
Cow position: | chrX:26700862-26701141 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 196 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 117, 33 |
Conread position: | 827-1156 |
Cow position: | chrX:7460107-7459765 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 232 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 121, 35 |
Conread position: | 827-1167 |
Cow position: | chrX:9293121-9293463 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 246 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 120, 34 |
Conread position: | 828-1109 |
Cow position: | chrX:29524469-29524755 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 197 |
Alignm E-value: | 7e-29 |
Alignm gaps (pig, cow): | 30, 59 |
Conread position: | 829-1094 |
Cow position: | chrX:38173776-38174030 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 178 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 158, 32 |
Conread position: | 829-1167 |
Cow position: | chrX:21312897-21312562 (view UCSC Genome Browser custom track) |
Alignm length: | 343 |
Alignm identity: | 225 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 110, 33 |
Conread position: | 830-1167 |
Cow position: | chrX:4280319-4280670 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 130, 24 |
Conread position: | 830-1178 |
Cow position: | chrX:15756968-15757322 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 245 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 126, 29 |
Conread position: | 833-1109 |
Cow position: | chrX:24208116-24207840 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 180 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 56, 29 |
Conread position: | 836-1153 |
Cow position: | chrX:10989772-10990097 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 231 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 156, 24 |
Conread position: | 836-1167 |
Cow position: | chrX:30732707-30732376 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 243 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 112, 25 |
Conread position: | 837-1109 |
Cow position: | chrX:38890246-38890513 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 195 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 110, 18 |
Conread position: | 838-1154 |
Cow position: | chrX:7897339-7897014 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 236 |
Alignm E-value: | 9.00054e-42 |
Alignm gaps (pig, cow): | 134, 23 |
Conread position: | 840-1167 |
Cow position: | chrX:28818304-28818625 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 229 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 108, 26 |
Conread position: | 864-1083 |
Cow position: | chrX:43982247-43982455 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 154 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 157, 28 |
Conread position: | 868-1085 |
Cow position: | chrX:25974970-25974755 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 151 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 92, 26 |
Conread position: | 868-1109 |
Cow position: | chrX:28822316-28822559 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 166 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 129, 53 |
Conread position: | 876-1155 |
Cow position: | chrX:25361206-25361496 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 207 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 63, 10 |
Conread position: | 889-1167 |
Cow position: | chrX:1120762-1121051 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 201 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 67, 81 |
Conread position: | 1719-1949 |
Cow position: | chrX:16836016-16836244 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 154 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 10, 63 |
Conread position: | 1722-1949 |
Cow position: | chrX:34991636-34991406 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 161 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 21, 35 |
Conread position: | 1723-1949 |
Cow position: | chrX:34412120-34411888 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 160 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 41, 9 |
Conread position: | 1736-1949 |
Cow position: | chrX:16984895-16984683 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 146 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 36, 45 |
Conread position: | 1739-1950 |
Cow position: | chrX:35986079-35985859 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 158 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 8, 68 |
Conread position: | 1741-1949 |
Cow position: | chrX:27668706-27668916 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 154 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 39, 22 |
Conread position: | 1741-1949 |
Cow position: | chrX:34836817-34837022 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 140 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 1759-1949 |
Cow position: | chrX:31480204-31480013 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 136 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 96, 160 |
Conread position: | 1760-1934 |
Cow position: | chrX:20957477-20957295 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 134 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 23, 0 |
Conread position: | 1760-1948 |
Cow position: | chrX:11325869-11326054 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 141 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 21, 108 |
Conread position: | 1760-1949 |
Cow position: | chrX:20584547-20584370 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 138 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 1768-1953 |
Cow position: | chrX:20666675-20666865 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 137 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 85, 12 |
Conread position: | 1780-1924 |
Cow position: | chrX:14135892-14135745 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 110 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 81, 0 |
Conread position: | 1780-1942 |
Cow position: | chrX:27145816-27145653 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 120 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 109, 63 |
Conread position: | 1780-1948 |
Cow position: | chrX:20583877-20583709 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 124 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 81, 20 |
Conread position: | 1780-1949 |
Cow position: | chrX:2936170-2935999 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 123 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 82, 0 |
Conread position: | 1780-1949 |
Cow position: | chrX:8869187-8869360 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 123 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 75, 0 |
Conread position: | 1780-1949 |
Cow position: | chrX:22115097-22115275 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 130 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 1780-1971 |
Cow position: | chrX:6480378-6480576 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 141 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 96, 170 |
Conread position: | 1785-1949 |
Cow position: | chrX:34314233-34314066 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 122 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 86, 0 |
Show alignments to all cow chromosomes.