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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8053B15.5
        

               
Conread position:
               
114-511
               

               
Cow position:
               
chr27:165119-164716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
188, 265
               

               
Conread position:
               
171-495
               

               
Cow position:
               
chr27:4664858-4664529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 283
               

               
Conread position:
               
171-498
               

               
Cow position:
               
chr27:10992749-10992406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 117
               

               
Conread position:
               
173-518
               

               
Cow position:
               
chr27:16620366-16620021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 42
               

               
Conread position:
               
173-522
               

               
Cow position:
               
chr27:21408172-21408530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 9
               

               
Conread position:
               
175-483
               

               
Cow position:
               
chr27:15866599-15866292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 171
               

               
Conread position:
               
177-480
               

               
Cow position:
               
chr27:1675747-1675437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
8, 213
               

               
Conread position:
               
179-343
               

               
Cow position:
               
chr27:26135632-26135470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
179-481
               

               
Cow position:
               
chr27:6454594-6454281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
34, 73
               

               
Conread position:
               
179-508
               

               
Cow position:
               
chr27:8353838-8353516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
62, 77
               

               
Conread position:
               
180-341
               

               
Cow position:
               
chr27:25800413-25800251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
127, 158
               

               
Conread position:
               
180-348
               

               
Cow position:
               
chr27:5967434-5967264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
20, 34
               

               
Conread position:
               
180-373
               

               
Cow position:
               
chr27:7277720-7277914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
22, 71
               

               
Conread position:
               
180-510
               

               
Cow position:
               
chr27:21393134-21393462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
298, 122
               

               
Conread position:
               
181-566
               

               
Cow position:
               
chr27:13198277-13197898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
126, 87
               

               
Conread position:
               
182-316
               

               
Cow position:
               
chr27:27469358-27469494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
182-323
               

               
Cow position:
               
chr27:4389839-4389982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
46, 26
               

               
Conread position:
               
182-323
               

               
Cow position:
               
chr27:4835208-4835349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
125, 36
               

               
Conread position:
               
182-323
               

               
Cow position:
               
chr27:10275091-10275234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
182-327
               

               
Cow position:
               
chr27:6019334-6019481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
182-331
               

               
Cow position:
               
chr27:27558129-27558280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
22, 139
               

               
Conread position:
               
182-333
               

               
Cow position:
               
chr27:263587-263740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
182-334
               

               
Cow position:
               
chr27:344133-343979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
182-334
               

               
Cow position:
               
chr27:15668100-15668257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
103, 70
               

               
Conread position:
               
182-334
               

               
Cow position:
               
chr27:22559448-22559295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
125, 46
               

               
Conread position:
               
182-338
               

               
Cow position:
               
chr27:7648161-7648321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
182-338
               

               
Cow position:
               
chr27:20001016-20000858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
182-344
               

               
Cow position:
               
chr27:20554323-20554157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
182-347
               

               
Cow position:
               
chr27:3652900-3652734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
18, 32
               

               
Conread position:
               
182-348
               

               
Cow position:
               
chr27:19146484-19146652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
182-348
               

               
Cow position:
               
chr27:21452251-21452422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
20, 153
               

               
Conread position:
               
182-348
               

               
Cow position:
               
chr27:26239614-26239448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
182-351
               

               
Cow position:
               
chr27:22771980-22772152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
125, 75
               

               
Conread position:
               
182-358
               

               
Cow position:
               
chr27:5424010-5424193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
182-358
               

               
Cow position:
               
chr27:8262638-8262816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
182-363
               

               
Cow position:
               
chr27:2569890-2570073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
182-364
               

               
Cow position:
               
chr27:26010153-26009975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
130, 17
               

               
Conread position:
               
182-367
               

               
Cow position:
               
chr27:1768913-1769100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
21, 37
               

               
Conread position:
               
182-367
               

               
Cow position:
               
chr27:14125388-14125575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
182-367
               

               
Cow position:
               
chr27:14381236-14381422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
125, 99
               

               
Conread position:
               
182-367
               

               
Cow position:
               
chr27:20799211-20799398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
46, 40
               

               
Conread position:
               
182-373
               

               
Cow position:
               
chr27:29234776-29234580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
182-382
               

               
Cow position:
               
chr27:26087593-26087398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
125, 65
               

               
Conread position:
               
182-383
               

               
Cow position:
               
chr27:13430490-13430282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
27, 95
               

               
Conread position:
               
182-384
               

               
Cow position:
               
chr27:16292765-16292563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
43, 14
               

               
Conread position:
               
182-403
               

               
Cow position:
               
chr27:20549319-20549544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
125, 22
               

               
Conread position:
               
182-406
               

               
Cow position:
               
chr27:10085494-10085716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
125, 95
               

               
Conread position:
               
182-415
               

               
Cow position:
               
chr27:27896876-27897111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
182-424
               

               
Cow position:
               
chr27:20629399-20629159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
125, 160
               

               
Conread position:
               
182-425
               

               
Cow position:
               
chr27:26142165-26141917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
182-427
               

               
Cow position:
               
chr27:427485-427250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
182-430
               

               
Cow position:
               
chr27:1906440-1906191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
125, 243
               

               
Conread position:
               
182-430
               

               
Cow position:
               
chr27:29341173-29341431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
182-432
               

               
Cow position:
               
chr27:23502833-23502583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 148
               

               
Conread position:
               
182-433
               

               
Cow position:
               
chr27:3239642-3239894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
125, 31
               

               
Conread position:
               
182-433
               

               
Cow position:
               
chr27:7418501-7418765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
31, 230
               

               
Conread position:
               
182-433
               

               
Cow position:
               
chr27:23595641-23595391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
182-433
               

               
Cow position:
               
chr27:24295460-24295209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
125, 31
               

               
Conread position:
               
182-433
               

               
Cow position:
               
chr27:26545553-26545805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 51
               

               
Conread position:
               
182-434
               

               
Cow position:
               
chr27:20636705-20636962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
120, 191
               

               
Conread position:
               
182-434
               

               
Cow position:
               
chr27:27187045-27187293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
28, 116
               

               
Conread position:
               
182-439
               

               
Cow position:
               
chr27:5853546-5853805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
111, 220
               

               
Conread position:
               
182-439
               

               
Cow position:
               
chr27:23511490-23511234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
125, 142
               

               
Conread position:
               
182-439
               

               
Cow position:
               
chr27:26935000-26935262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
182-442
               

               
Cow position:
               
chr27:6292745-6292480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
31, 161
               

               
Conread position:
               
182-442
               

               
Cow position:
               
chr27:16984158-16983894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
182-445
               

               
Cow position:
               
chr27:22107884-22108155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
33, 57
               

               
Conread position:
               
182-455
               

               
Cow position:
               
chr27:16331698-16331440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
182-456
               

               
Cow position:
               
chr27:834173-834453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
45, 35
               

               
Conread position:
               
182-456
               

               
Cow position:
               
chr27:19962852-19962568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
44, 187
               

               
Conread position:
               
182-470
               

               
Cow position:
               
chr27:26785611-26785894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 155
               

               
Conread position:
               
182-474
               

               
Cow position:
               
chr27:3650282-3650580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
18, 32
               

               
Conread position:
               
182-479
               

               
Cow position:
               
chr27:28106760-28107062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
29, 131
               

               
Conread position:
               
182-481
               

               
Cow position:
               
chr27:15927142-15926842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 21
               

               
Conread position:
               
182-482
               

               
Cow position:
               
chr27:12231540-12231841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
140, 27
               

               
Conread position:
               
182-482
               

               
Cow position:
               
chr27:16823177-16822883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
182-482
               

               
Cow position:
               
chr27:25970882-25970577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
25, 182
               

               
Conread position:
               
182-482
               

               
Cow position:
               
chr27:26300212-26299906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
33, 149
               

               
Conread position:
               
182-482
               

               
Cow position:
               
chr27:28293548-28293247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
46, 186
               

               
Conread position:
               
182-483
               

               
Cow position:
               
chr27:19423575-19423267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
182-483
               

               
Cow position:
               
chr27:25809152-25809447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 179
               

               
Conread position:
               
182-484
               

               
Cow position:
               
chr27:26313830-26314130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 87
               

               
Conread position:
               
182-485
               

               
Cow position:
               
chr27:8743303-8742993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 32
               

               
Conread position:
               
182-485
               

               
Cow position:
               
chr27:9989079-9988775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
28, 203
               

               
Conread position:
               
182-485
               

               
Cow position:
               
chr27:13901923-13902232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
182-485
               

               
Cow position:
               
chr27:26015780-26015475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
125, 38
               

               
Conread position:
               
182-485
               

               
Cow position:
               
chr27:26598246-26597937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
125, 151
               

               
Conread position:
               
182-485
               

               
Cow position:
               
chr27:29374106-29373796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
182-485
               

               
Cow position:
               
chr27:29797036-29797346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
18, 32
               

               
Conread position:
               
182-491
               

               
Cow position:
               
chr27:9254347-9254040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
28, 131
               

               
Conread position:
               
182-491
               

               
Cow position:
               
chr27:28276639-28276333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
123, 57
               

               
Conread position:
               
182-492
               

               
Cow position:
               
chr27:1654899-1655216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
182-492
               

               
Cow position:
               
chr27:11651450-11651133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
182-495
               

               
Cow position:
               
chr27:13257794-13258111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
29, 46
               

               
Conread position:
               
182-495
               

               
Cow position:
               
chr27:27737558-27737869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
55, 153
               

               
Conread position:
               
182-496
               

               
Cow position:
               
chr27:9371874-9371559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
33, 182
               

               
Conread position:
               
182-496
               

               
Cow position:
               
chr27:18954834-18955144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
28, 106
               

               
Conread position:
               
182-498
               

               
Cow position:
               
chr27:2900870-2901193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
182-498
               

               
Cow position:
               
chr27:20828332-20828657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 230
               

               
Conread position:
               
182-498
               

               
Cow position:
               
chr27:24999365-24999687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 155
               

               
Conread position:
               
182-502
               

               
Cow position:
               
chr27:30374185-30374527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
125, 70
               

               
Conread position:
               
182-503
               

               
Cow position:
               
chr27:1481693-1482020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 319
               

               
Conread position:
               
182-505
               

               
Cow position:
               
chr27:3988980-3988651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 115
               

               
Conread position:
               
182-505
               

               
Cow position:
               
chr27:22255258-22254927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
182-506
               

               
Cow position:
               
chr27:7289738-7290063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 255
               

               
Conread position:
               
182-506
               

               
Cow position:
               
chr27:14530473-14530804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
182-506
               

               
Cow position:
               
chr27:17763792-17763468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
125, 179
               

               
Conread position:
               
182-506
               

               
Cow position:
               
chr27:21349377-21349702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 255
               

               
Conread position:
               
182-506
               

               
Cow position:
               
chr27:22655006-22655337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 319
               

               
Conread position:
               
182-506
               

               
Cow position:
               
chr27:29812100-29812426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 256
               

               
Conread position:
               
182-508
               

               
Cow position:
               
chr27:22440513-22440179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
182-508
               

               
Cow position:
               
chr27:29309392-29309065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
125, 44
               

               
Conread position:
               
182-510
               

               
Cow position:
               
chr27:2298784-2298448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
182-510
               

               
Cow position:
               
chr27:15454582-15454252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 35
               

               
Conread position:
               
182-510
               

               
Cow position:
               
chr27:30388846-30389178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 57
               

               
Conread position:
               
182-511
               

               
Cow position:
               
chr27:523821-524157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
182-511
               

               
Cow position:
               
chr27:2332300-2332632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 32
               

               
Conread position:
               
182-511
               

               
Cow position:
               
chr27:4881979-4881643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 319
               

               
Conread position:
               
182-511
               

               
Cow position:
               
chr27:4983230-4983566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 32
               

               
Conread position:
               
182-511
               

               
Cow position:
               
chr27:5861576-5861237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
46, 35
               

               
Conread position:
               
182-511
               

               
Cow position:
               
chr27:9046032-9045695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
182-511
               

               
Cow position:
               
chr27:9334990-9335323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 144
               

               
Conread position:
               
182-511
               

               
Cow position:
               
chr27:11403279-11402955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 254
               

               
Conread position:
               
182-511
               

               
Cow position:
               
chr27:12239945-12240276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
182-511
               

               
Cow position:
               
chr27:12549480-12549144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 38
               

               
Conread position:
               
182-511
               

               
Cow position:
               
chr27:13442467-13442811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
125, 323
               

               
Conread position:
               
182-511
               

               
Cow position:
               
chr27:18621171-18620843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
125, 230
               

               
Conread position:
               
182-511
               

               
Cow position:
               
chr27:19931524-19931191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
125, 179
               

               
Conread position:
               
182-511
               

               
Cow position:
               
chr27:28907436-28907103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 57
               

               
Conread position:
               
182-511
               

               
Cow position:
               
chr27:28984570-28984902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 32
               

               
Conread position:
               
182-512
               

               
Cow position:
               
chr27:815736-815405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 245
               

               
Conread position:
               
182-512
               

               
Cow position:
               
chr27:8942321-8942644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
267, 118
               

               
Conread position:
               
182-512
               

               
Cow position:
               
chr27:11481730-11482056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
122, 84
               

               
Conread position:
               
182-512
               

               
Cow position:
               
chr27:21977766-21978100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 256
               

               
Conread position:
               
182-512
               

               
Cow position:
               
chr27:24559079-24559406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
62, 130
               

               
Conread position:
               
182-512
               

               
Cow position:
               
chr27:25924154-25923829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
46, 60
               

               
Conread position:
               
182-512
               

               
Cow position:
               
chr27:26856840-26857157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 195
               

               
Conread position:
               
182-512
               

               
Cow position:
               
chr27:28018706-28018372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 15
               

               
Conread position:
               
182-512
               

               
Cow position:
               
chr27:30792568-30792899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
138, 35
               

               
Conread position:
               
182-514
               

               
Cow position:
               
chr27:9337884-9337554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 142
               

               
Conread position:
               
182-515
               

               
Cow position:
               
chr27:9090424-9090767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 290
               

               
Conread position:
               
182-515
               

               
Cow position:
               
chr27:15871532-15871196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 16
               

               
Conread position:
               
182-515
               

               
Cow position:
               
chr27:21350644-21350985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 36
               

               
Conread position:
               
182-515
               

               
Cow position:
               
chr27:22426458-22426796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 181
               

               
Conread position:
               
182-516
               

               
Cow position:
               
chr27:15272277-15271942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 244
               

               
Conread position:
               
182-516
               

               
Cow position:
               
chr27:30921522-30921194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
133, 124
               

               
Conread position:
               
182-518
               

               
Cow position:
               
chr27:1353968-1353620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 199
               

               
Conread position:
               
182-518
               

               
Cow position:
               
chr27:2557183-2556839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 32
               

               
Conread position:
               
182-518
               

               
Cow position:
               
chr27:4673386-4673052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
252, 124
               

               
Conread position:
               
182-518
               

               
Cow position:
               
chr27:7958465-7958808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 36
               

               
Conread position:
               
182-518
               

               
Cow position:
               
chr27:13876097-13875764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 46
               

               
Conread position:
               
182-518
               

               
Cow position:
               
chr27:14670010-14670351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 181
               

               
Conread position:
               
182-518
               

               
Cow position:
               
chr27:15867758-15867429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 172
               

               
Conread position:
               
182-518
               

               
Cow position:
               
chr27:18558738-18558392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
78, 149
               

               
Conread position:
               
182-518
               

               
Cow position:
               
chr27:22179417-22179761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
125, 36
               

               
Conread position:
               
182-518
               

               
Cow position:
               
chr27:22418396-22418734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 150
               

               
Conread position:
               
182-518
               

               
Cow position:
               
chr27:27040967-27040638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 46
               

               
Conread position:
               
182-518
               

               
Cow position:
               
chr27:30177204-30177541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
128, 15
               

               
Conread position:
               
182-519
               

               
Cow position:
               
chr27:11434960-11435290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 116
               

               
Conread position:
               
182-519
               

               
Cow position:
               
chr27:15925706-15925373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 159
               

               
Conread position:
               
182-519
               

               
Cow position:
               
chr27:23128823-23128488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 57
               

               
Conread position:
               
182-520
               

               
Cow position:
               
chr27:1294047-1294383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 253
               

               
Conread position:
               
182-520
               

               
Cow position:
               
chr27:2001644-2001989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
182-520
               

               
Cow position:
               
chr27:5836629-5836972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 299
               

               
Conread position:
               
182-520
               

               
Cow position:
               
chr27:5915304-5915648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 318
               

               
Conread position:
               
182-520
               

               
Cow position:
               
chr27:11422473-11422800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
128, 50
               

               
Conread position:
               
182-520
               

               
Cow position:
               
chr27:13422364-13422019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
182-520
               

               
Cow position:
               
chr27:15033092-15032750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 142
               

               
Conread position:
               
182-520
               

               
Cow position:
               
chr27:15644086-15644431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
182-520
               

               
Cow position:
               
chr27:18446210-18446556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
182-520
               

               
Cow position:
               
chr27:19522909-19522564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 319
               

               
Conread position:
               
182-520
               

               
Cow position:
               
chr27:20137625-20137970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 37
               

               
Conread position:
               
182-520
               

               
Cow position:
               
chr27:20811216-20811556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 89
               

               
Conread position:
               
182-520
               

               
Cow position:
               
chr27:24055498-24055820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
125, 33
               

               
Conread position:
               
182-521
               

               
Cow position:
               
chr27:32592-32938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 32
               

               
Conread position:
               
182-521
               

               
Cow position:
               
chr27:526709-527055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
182-521
               

               
Cow position:
               
chr27:724344-724690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
182-521
               

               
Cow position:
               
chr27:1030754-1030411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
18, 32
               

               
Conread position:
               
182-521
               

               
Cow position:
               
chr27:1521479-1521825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
18, 32
               

               
Conread position:
               
182-521
               

               
Cow position:
               
chr27:4769115-4769461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 32
               

               
Conread position:
               
182-521
               

               
Cow position:
               
chr27:5881328-5881673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
182-521
               

               
Cow position:
               
chr27:5990252-5989911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
126, 87
               

               
Conread position:
               
182-521
               

               
Cow position:
               
chr27:8187618-8187968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
182-521
               

               
Cow position:
               
chr27:8959217-8958869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
182-521
               

               
Cow position:
               
chr27:8973245-8973588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
125, 145
               

               
Conread position:
               
182-521
               

               
Cow position:
               
chr27:10579743-10580084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
18, 32
               

               
Conread position:
               
182-521
               

               
Cow position:
               
chr27:10590304-10590650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 32
               

               
Conread position:
               
182-521
               

               
Cow position:
               
chr27:11606086-11605746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 239
               

               
Conread position:
               
182-521
               

               
Cow position:
               
chr27:12005881-12005535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
182-521
               

               
Cow position:
               
chr27:12006948-12007294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
182-521
               

               
Cow position:
               
chr27:12016711-12016367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 32
               

               
Conread position:
               
182-521
               

               
Cow position:
               
chr27:12097966-12097620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
18, 32
               

               
Conread position:
               
182-521
               

               
Cow position:
               
chr27:12147692-12148038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 32
               

               
Conread position:
               
182-521
               

               
Cow position:
               
chr27:12501914-12502260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
182-521
               

               
Cow position:
               
chr27:13182501-13182169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 69
               

               
Conread position:
               
182-521
               

               
Cow position:
               
chr27:13409795-13410144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 53
               

               
Conread position:
               
182-521
               

               
Cow position:
               
chr27:14297989-14298334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 32
               

               
Conread position:
               
182-521
               

               
Cow position:
               
chr27:15100439-15100785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
18, 34
               

               
Conread position:
               
182-521
               

               
Cow position:
               
chr27:15178584-15178230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
182-521
               

               
Cow position:
               
chr27:15312569-15312231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 35
               

               
Conread position:
               
182-521
               

               
Cow position:
               
chr27:16030598-16030254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
182-521
               

               
Cow position:
               
chr27:17397083-17397421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 150
               

               
Conread position:
               
182-521
               

               
Cow position:
               
chr27:17403267-17402921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
182-521
               

               
Cow position:
               
chr27:18812058-18811712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
182-521
               

               
Cow position:
               
chr27:19299766-19299420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
182-521
               

               
Cow position:
               
chr27:19325871-19325525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
182-521
               

               
Cow position:
               
chr27:19487184-19486838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
182-521
               

               
Cow position:
               
chr27:20858918-20859257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 32
               

               
Conread position:
               
182-521
               

               
Cow position:
               
chr27:22796859-22796514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
182-521
               

               
Cow position:
               
chr27:23079886-23080232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
182-521
               

               
Cow position:
               
chr27:24241319-24240973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
182-521
               

               
Cow position:
               
chr27:26223890-26224243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 195
               

               
Conread position:
               
182-521
               

               
Cow position:
               
chr27:26463515-26463861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
182-521
               

               
Cow position:
               
chr27:26584675-26584329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
182-521
               

               
Cow position:
               
chr27:27630370-27630716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
182-521
               

               
Cow position:
               
chr27:29035582-29035236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 32
               

               
Conread position:
               
182-521
               

               
Cow position:
               
chr27:29446305-29445962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
125, 57
               

               
Conread position:
               
182-521
               

               
Cow position:
               
chr27:30014704-30015050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
182-521
               

               
Cow position:
               
chr27:30271522-30271176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
182-521
               

               
Cow position:
               
chr27:30306477-30306131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 32
               

               
Conread position:
               
182-521
               

               
Cow position:
               
chr27:30361577-30361231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 32
               

               
Conread position:
               
182-521
               

               
Cow position:
               
chr27:30684279-30683933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
182-521
               

               
Cow position:
               
chr27:31230724-31231063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 142
               

               
Conread position:
               
182-521
               

               
Cow position:
               
chr27:31566213-31566559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
182-522
               

               
Cow position:
               
chr27:1189442-1189786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 270
               

               
Conread position:
               
182-538
               

               
Cow position:
               
chr27:12277906-12278254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
35, 47
               

               
Conread position:
               
182-543
               

               
Cow position:
               
chr27:27141963-27141599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 49
               

               
Conread position:
               
182-560
               

               
Cow position:
               
chr27:29515490-29515870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
134, 186
               

               
Conread position:
               
182-561
               

               
Cow position:
               
chr27:1636579-1636953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
46, 33
               

               
Conread position:
               
182-561
               

               
Cow position:
               
chr27:11255884-11255502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 245
               

               
Conread position:
               
182-562
               

               
Cow position:
               
chr27:10306905-10307322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
120, 286
               

               
Conread position:
               
182-568
               

               
Cow position:
               
chr27:1768263-1768648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 82
               

               
Conread position:
               
182-599
               

               
Cow position:
               
chr27:6074286-6073876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 34
               

               
Conread position:
               
182-602
               

               
Cow position:
               
chr27:27521633-27522057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 348
               

               
Conread position:
               
182-613
               

               
Cow position:
               
chr27:27064074-27064506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
41, 34
               

               
Conread position:
               
182-616
               

               
Cow position:
               
chr27:16787204-16786757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 365
               

               
Conread position:
               
183-362
               

               
Cow position:
               
chr27:26848907-26848729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
124, 10
               

               
Conread position:
               
183-367
               

               
Cow position:
               
chr27:21297271-21297084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
183-375
               

               
Cow position:
               
chr27:9060105-9059907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
183-403
               

               
Cow position:
               
chr27:11470331-11470567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
124, 213
               

               
Conread position:
               
183-433
               

               
Cow position:
               
chr27:16260596-16260847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
125, 82
               

               
Conread position:
               
183-433
               

               
Cow position:
               
chr27:20749671-20749923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
183-433
               

               
Cow position:
               
chr27:27931064-27931304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
122, 97
               

               
Conread position:
               
183-447
               

               
Cow position:
               
chr27:15315860-15315600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
49, 173
               

               
Conread position:
               
183-470
               

               
Cow position:
               
chr27:26984707-26984420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
128, 44
               

               
Conread position:
               
183-483
               

               
Cow position:
               
chr27:264616-264317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
252, 135
               

               
Conread position:
               
183-483
               

               
Cow position:
               
chr27:18205705-18205403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
42, 159
               

               
Conread position:
               
183-496
               

               
Cow position:
               
chr27:20065993-20066302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 33
               

               
Conread position:
               
183-505
               

               
Cow position:
               
chr27:2390664-2390336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 35
               

               
Conread position:
               
183-512
               

               
Cow position:
               
chr27:25380365-25380032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
119, 34
               

               
Conread position:
               
183-518
               

               
Cow position:
               
chr27:6523430-6523071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
183-518
               

               
Cow position:
               
chr27:22035009-22035344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 57
               

               
Conread position:
               
183-518
               

               
Cow position:
               
chr27:26807190-26807530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
24, 97
               

               
Conread position:
               
183-518
               

               
Cow position:
               
chr27:27019733-27020070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 141
               

               
Conread position:
               
183-519
               

               
Cow position:
               
chr27:13317595-13317927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 148
               

               
Conread position:
               
183-519
               

               
Cow position:
               
chr27:26091028-26091363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
30, 56
               

               
Conread position:
               
183-520
               

               
Cow position:
               
chr27:16305410-16305744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 236
               

               
Conread position:
               
183-588
               

               
Cow position:
               
chr27:20640973-20641376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
122, 236
               

               
Conread position:
               
183-618
               

               
Cow position:
               
chr27:10582733-10582303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 260
               

               
Conread position:
               
184-334
               

               
Cow position:
               
chr27:21418626-21418777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
123, 55
               

               
Conread position:
               
184-336
               

               
Cow position:
               
chr27:26219304-26219148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
184-338
               

               
Cow position:
               
chr27:26631337-26631181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
184-348
               

               
Cow position:
               
chr27:29830124-29830289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
123, 60
               

               
Conread position:
               
184-367
               

               
Cow position:
               
chr27:8201738-8201919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
123, 87
               

               
Conread position:
               
184-371
               

               
Cow position:
               
chr27:26436335-26436517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
123, 87
               

               
Conread position:
               
184-433
               

               
Cow position:
               
chr27:23894136-23894387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
184-433
               

               
Cow position:
               
chr27:28146280-28146530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
123, 140
               

               
Conread position:
               
184-439
               

               
Cow position:
               
chr27:4330950-4330701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
184-476
               

               
Cow position:
               
chr27:26433445-26433740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
120, 141
               

               
Conread position:
               
184-483
               

               
Cow position:
               
chr27:1173174-1173480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
184-505
               

               
Cow position:
               
chr27:10384233-10384561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
184-519
               

               
Cow position:
               
chr27:26412905-26413221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
131, 54
               

               
Conread position:
               
184-520
               

               
Cow position:
               
chr27:732932-732600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 140
               

               
Conread position:
               
184-520
               

               
Cow position:
               
chr27:28081948-28082297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
123, 140
               

               
Conread position:
               
184-521
               

               
Cow position:
               
chr27:16045532-16045871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
123, 253
               

               
Conread position:
               
185-456
               

               
Cow position:
               
chr27:13273641-13273915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
47, 139
               

               
Conread position:
               
185-488
               

               
Cow position:
               
chr27:23452848-23452543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 121
               

               
Conread position:
               
185-515
               

               
Cow position:
               
chr27:15319817-15319485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
125, 23
               

               
Conread position:
               
185-516
               

               
Cow position:
               
chr27:23472621-23472287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 99
               

               
Conread position:
               
185-518
               

               
Cow position:
               
chr27:8291645-8291973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 32
               

               
Conread position:
               
185-518
               

               
Cow position:
               
chr27:17473189-17472842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 30
               

               
Conread position:
               
185-519
               

               
Cow position:
               
chr27:27683747-27684088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 79
               

               
Conread position:
               
185-523
               

               
Cow position:
               
chr27:22171666-22171330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 35
               

               
Conread position:
               
185-567
               

               
Cow position:
               
chr27:27867311-27867714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
15, 47
               

               
Conread position:
               
186-334
               

               
Cow position:
               
chr27:28036546-28036698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
186-416
               

               
Cow position:
               
chr27:9262475-9262242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
41, 126
               

               
Conread position:
               
187-398
               

               
Cow position:
               
chr27:27605976-27606191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
187-521
               

               
Cow position:
               
chr27:2627706-2628046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
188-433
               

               
Cow position:
               
chr27:19014820-19015073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
15, 44
               

               
Conread position:
               
188-456
               

               
Cow position:
               
chr27:19390910-19390639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
21, 172
               

               
Conread position:
               
188-512
               

               
Cow position:
               
chr27:25783949-25783643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
224, 99
               

               
Conread position:
               
189-482
               

               
Cow position:
               
chr27:11723532-11723839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
190-506
               

               
Cow position:
               
chr27:2900169-2899856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
117, 32
               

               
Conread position:
               
190-522
               

               
Cow position:
               
chr27:15349439-15349784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 315
               

               
Conread position:
               
191-402
               

               
Cow position:
               
chr27:15408059-15408268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
192-324
               

               
Cow position:
               
chr27:26551446-26551316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
112, 88
               

               
Conread position:
               
192-512
               

               
Cow position:
               
chr27:27449076-27449390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 115
               

               
Conread position:
               
194-424
               

               
Cow position:
               
chr27:27292494-27292723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
111, 124
               

               
Conread position:
               
195-375
               

               
Cow position:
               
chr27:23148170-23148351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
121, 111
               

               
Conread position:
               
195-521
               

               
Cow position:
               
chr27:20634807-20634489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 37
               

               
Conread position:
               
196-412
               

               
Cow position:
               
chr27:17925962-17926178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
10, 112
               

               
Conread position:
               
197-433
               

               
Cow position:
               
chr27:17462793-17463032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
56, 25
               

               
Conread position:
               
200-486
               

               
Cow position:
               
chr27:8062008-8062297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
33, 132
               

               
Conread position:
               
202-348
               

               
Cow position:
               
chr27:27002531-27002682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
202-457
               

               
Cow position:
               
chr27:28895528-28895779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
103, 31
               

               
Conread position:
               
203-351
               

               
Cow position:
               
chr27:12001279-12001428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
104, 10
               

               
Conread position:
               
203-483
               

               
Cow position:
               
chr27:11413065-11412790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 72
               

               
Conread position:
               
203-518
               

               
Cow position:
               
chr27:19718269-19717955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 128
               

               
Conread position:
               
203-561
               

               
Cow position:
               
chr27:16238246-16237893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
101, 164
               

               
Conread position:
               
203-563
               

               
Cow position:
               
chr27:24227443-24227815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 263
               

               
Conread position:
               
204-481
               

               
Cow position:
               
chr27:27049575-27049841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
204-485
               

               
Cow position:
               
chr27:11488939-11489212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
13, 79
               

               
Conread position:
               
205-432
               

               
Cow position:
               
chr27:21283422-21283197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
205-481
               

               
Cow position:
               
chr27:11693395-11693665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
220, 75
               

               
Conread position:
               
205-481
               

               
Cow position:
               
chr27:26161853-26161568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
101, 157
               

               
Conread position:
               
205-483
               

               
Cow position:
               
chr27:12650286-12650562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
38, 105
               

               
Conread position:
               
205-486
               

               
Cow position:
               
chr27:27501987-27502277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
99, 223
               

               
Conread position:
               
205-491
               

               
Cow position:
               
chr27:10283961-10284267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
88, 217
               

               
Conread position:
               
205-498
               

               
Cow position:
               
chr27:4824769-4825060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
102, 21
               

               
Conread position:
               
205-498
               

               
Cow position:
               
chr27:4829466-4829750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 60
               

               
Conread position:
               
205-512
               

               
Cow position:
               
chr27:4805563-4805870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
98, 21
               

               
Conread position:
               
205-512
               

               
Cow position:
               
chr27:24445808-24446118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 290
               

               
Conread position:
               
205-518
               

               
Cow position:
               
chr27:19388365-19388047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
103, 131
               

               
Conread position:
               
206-518
               

               
Cow position:
               
chr27:299036-299350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 277
               

               
Conread position:
               
206-521
               

               
Cow position:
               
chr27:17476389-17476081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
101, 7
               

               
Conread position:
               
207-348
               

               
Cow position:
               
chr27:26367016-26367159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
207-367
               

               
Cow position:
               
chr27:15643734-15643896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
207-512
               

               
Cow position:
               
chr27:22549440-22549746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 68
               

               
Conread position:
               
207-512
               

               
Cow position:
               
chr27:26427782-26428094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
207-520
               

               
Cow position:
               
chr27:16182410-16182107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 94
               

               
Conread position:
               
207-520
               

               
Cow position:
               
chr27:26330722-26331046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
85, 298
               

               
Conread position:
               
207-521
               

               
Cow position:
               
chr27:3340134-3339813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
100, 178
               

               
Conread position:
               
207-521
               

               
Cow position:
               
chr27:11417546-11417867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
208-489
               

               
Cow position:
               
chr27:31365873-31365587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
99, 10
               

               
Conread position:
               
208-512
               

               
Cow position:
               
chr27:25791157-25790842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
208-542
               

               
Cow position:
               
chr27:23793838-23793514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
99, 37
               

               
Conread position:
               
209-340
               

               
Cow position:
               
chr27:6320466-6320599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
209-413
               

               
Cow position:
               
chr27:17645854-17646060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
101, 130
               

               
Conread position:
               
209-433
               

               
Cow position:
               
chr27:24115932-24116157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
98, 81
               

               
Conread position:
               
209-454
               

               
Cow position:
               
chr27:31219578-31219335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
98, 6
               

               
Conread position:
               
209-475
               

               
Cow position:
               
chr27:24937979-24938243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
98, 82
               

               
Conread position:
               
209-480
               

               
Cow position:
               
chr27:8961926-8962193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
98, 17
               

               
Conread position:
               
209-481
               

               
Cow position:
               
chr27:20866185-20866456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
19, 119
               

               
Conread position:
               
209-521
               

               
Cow position:
               
chr27:30418017-30417709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
96, 42
               

               
Conread position:
               
209-539
               

               
Cow position:
               
chr27:1058339-1058676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
113, 81
               

               
Conread position:
               
210-515
               

               
Cow position:
               
chr27:26999083-26999383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
95, 6
               

               
Conread position:
               
210-561
               

               
Cow position:
               
chr27:30856059-30856402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
315, 90
               

               
Conread position:
               
213-425
               

               
Cow position:
               
chr27:26796319-26796098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
213-433
               

               
Cow position:
               
chr27:30198615-30198393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
213-522
               

               
Cow position:
               
chr27:26397930-26398227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 80
               

               
Conread position:
               
214-512
               

               
Cow position:
               
chr27:23070024-23070320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 112
               

               
Conread position:
               
215-506
               

               
Cow position:
               
chr27:20372490-20372787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
92, 51
               

               
Conread position:
               
216-570
               

               
Cow position:
               
chr27:27856681-27856312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
37, 277
               

               
Conread position:
               
218-479
               

               
Cow position:
               
chr27:26653641-26653370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
218-498
               

               
Cow position:
               
chr27:4819376-4819652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
89, 46
               

               
Conread position:
               
219-433
               

               
Cow position:
               
chr27:19626951-19627164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
108, 83
               

               
Conread position:
               
220-318
               

               
Cow position:
               
chr27:19647328-19647427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
100
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
220-496
               

               
Cow position:
               
chr27:25411182-25411462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 221
               

               
Conread position:
               
220-512
               

               
Cow position:
               
chr27:22603495-22603209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
85, 97
               

               
Conread position:
               
220-522
               

               
Cow position:
               
chr27:6674568-6674266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 73
               

               
Conread position:
               
220-540
               

               
Cow position:
               
chr27:8629541-8629871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 171
               

               
Conread position:
               
220-568
               

               
Cow position:
               
chr27:12246978-12246634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
158, 39
               

               
Conread position:
               
221-540
               

               
Cow position:
               
chr27:1903396-1903061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
11, 104
               

               
Conread position:
               
222-426
               

               
Cow position:
               
chr27:20636180-20635977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
86, 171
               

               
Conread position:
               
222-457
               

               
Cow position:
               
chr27:30231948-30232181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
85, 60
               

               
Conread position:
               
222-462
               

               
Cow position:
               
chr27:15632726-15632490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
85, 19
               

               
Conread position:
               
222-523
               

               
Cow position:
               
chr27:30583068-30582769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
83, 120
               

               
Conread position:
               
222-614
               

               
Cow position:
               
chr27:536784-536395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
259, 86
               

               
Conread position:
               
223-416
               

               
Cow position:
               
chr27:13878040-13878235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
223-433
               

               
Cow position:
               
chr27:2429905-2430117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
223-485
               

               
Cow position:
               
chr27:13895534-13895804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
223-486
               

               
Cow position:
               
chr27:8589173-8589446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
84, 107
               

               
Conread position:
               
223-490
               

               
Cow position:
               
chr27:7212392-7212655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
84, 177
               

               
Conread position:
               
223-511
               

               
Cow position:
               
chr27:651627-651922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
223-515
               

               
Cow position:
               
chr27:1123347-1123067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
82, 53
               

               
Conread position:
               
223-518
               

               
Cow position:
               
chr27:27038511-27038807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 15
               

               
Conread position:
               
223-520
               

               
Cow position:
               
chr27:14129833-14129532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 138
               

               
Conread position:
               
223-521
               

               
Cow position:
               
chr27:3690803-3690498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
223-521
               

               
Cow position:
               
chr27:26341291-26341596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
224-506
               

               
Cow position:
               
chr27:5882184-5882472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 95
               

               
Conread position:
               
225-519
               

               
Cow position:
               
chr27:30868412-30868708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 143
               

               
Conread position:
               
225-521
               

               
Cow position:
               
chr27:28982577-28982880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
82, 276
               

               
Conread position:
               
226-367
               

               
Cow position:
               
chr27:31397495-31397352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
226-368
               

               
Cow position:
               
chr27:28477156-28477295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
81, 19
               

               
Conread position:
               
226-432
               

               
Cow position:
               
chr27:21564983-21564777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
76, 194
               

               
Conread position:
               
230-433
               

               
Cow position:
               
chr27:16526171-16526371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
173, 74
               

               
Conread position:
               
230-482
               

               
Cow position:
               
chr27:30561239-30560982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
77, 153
               

               
Conread position:
               
230-512
               

               
Cow position:
               
chr27:4385745-4386022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 33
               

               
Conread position:
               
231-521
               

               
Cow position:
               
chr27:18909574-18909283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
76, 174
               

               
Conread position:
               
232-490
               

               
Cow position:
               
chr27:31371972-31372231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
75, 173
               

               
Conread position:
               
232-521
               

               
Cow position:
               
chr27:66910-67203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
78, 16
               

               
Conread position:
               
233-348
               

               
Cow position:
               
chr27:12411839-12411956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
233-491
               

               
Cow position:
               
chr27:18439228-18438963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
40, 118
               

               
Conread position:
               
234-548
               

               
Cow position:
               
chr27:18922769-18922453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 134
               

               
Conread position:
               
235-425
               

               
Cow position:
               
chr27:26833491-26833307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
236-444
               

               
Cow position:
               
chr27:15342815-15343020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
96, 70
               

               
Conread position:
               
236-482
               

               
Cow position:
               
chr27:26595745-26595498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
66, 121
               

               
Conread position:
               
238-496
               

               
Cow position:
               
chr27:26424276-26424531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
69, 10
               

               
Conread position:
               
239-425
               

               
Cow position:
               
chr27:9922252-9922064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
68, 36
               

               
Conread position:
               
239-482
               

               
Cow position:
               
chr27:30677213-30676979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
58, 122
               

               
Conread position:
               
239-490
               

               
Cow position:
               
chr27:16099703-16099964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
239-512
               

               
Cow position:
               
chr27:22394483-22394208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
68, 82
               

               
Conread position:
               
239-520
               

               
Cow position:
               
chr27:3231440-3231153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 84
               

               
Conread position:
               
239-521
               

               
Cow position:
               
chr27:2590035-2589746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
241-396
               

               
Cow position:
               
chr27:29815917-29815762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
66, 27
               

               
Conread position:
               
241-433
               

               
Cow position:
               
chr27:197608-197414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
241-433
               

               
Cow position:
               
chr27:18218856-18218662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
242-433
               

               
Cow position:
               
chr27:27578881-27578691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
65, 7
               

               
Conread position:
               
242-518
               

               
Cow position:
               
chr27:16513571-16513851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
65, 126
               

               
Conread position:
               
242-518
               

               
Cow position:
               
chr27:24477711-24477446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
61, 119
               

               
Conread position:
               
242-518
               

               
Cow position:
               
chr27:27136224-27136486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
63, 22
               

               
Conread position:
               
242-518
               

               
Cow position:
               
chr27:29831377-29831657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 119
               

               
Conread position:
               
242-520
               

               
Cow position:
               
chr27:12751380-12751658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
65, 21
               

               
Conread position:
               
242-537
               

               
Cow position:
               
chr27:29208107-29207818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
201, 64
               

               
Conread position:
               
243-479
               

               
Cow position:
               
chr27:8534893-8534654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
58, 197
               

               
Conread position:
               
243-482
               

               
Cow position:
               
chr27:6899404-6899650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
243-512
               

               
Cow position:
               
chr27:18544308-18544033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 194
               

               
Conread position:
               
243-521
               

               
Cow position:
               
chr27:23576229-23576509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
62, 209
               

               
Conread position:
               
244-568
               

               
Cow position:
               
chr27:11535789-11536128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
63, 76
               

               
Conread position:
               
245-496
               

               
Cow position:
               
chr27:13860437-13860688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
62, 79
               

               
Conread position:
               
245-521
               

               
Cow position:
               
chr27:221749-222032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
245-568
               

               
Cow position:
               
chr27:20757750-20758068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
62, 116
               

               
Conread position:
               
247-482
               

               
Cow position:
               
chr27:10986783-10987015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
55, 86
               

               
Conread position:
               
247-520
               

               
Cow position:
               
chr27:29799248-29798971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
231, 0
               

               
Conread position:
               
248-565
               

               
Cow position:
               
chr27:15858786-15859109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 124
               

               
Conread position:
               
250-493
               

               
Cow position:
               
chr27:491190-490947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
55, 79
               

               
Conread position:
               
250-590
               

               
Cow position:
               
chr27:23124053-23124394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
60, 73
               

               
Conread position:
               
251-589
               

               
Cow position:
               
chr27:28207100-28206757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
56, 321
               

               
Conread position:
               
252-518
               

               
Cow position:
               
chr27:20283924-20283675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
237, 38
               

               
Conread position:
               
252-521
               

               
Cow position:
               
chr27:27809765-27810041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
253-521
               

               
Cow position:
               
chr27:26787064-26787334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
55, 173
               

               
Conread position:
               
253-572
               

               
Cow position:
               
chr27:16960496-16960179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
7, 20
               

               
Conread position:
               
255-433
               

               
Cow position:
               
chr27:13977092-13977274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
52, 109
               

               
Conread position:
               
255-467
               

               
Cow position:
               
chr27:20092324-20092533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
52, 29
               

               
Conread position:
               
256-479
               

               
Cow position:
               
chr27:9978123-9977900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
51, 67
               

               
Conread position:
               
256-521
               

               
Cow position:
               
chr27:23016153-23015883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
258-512
               

               
Cow position:
               
chr27:8195511-8195257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
49, 66
               

               
Conread position:
               
258-618
               

               
Cow position:
               
chr27:30362537-30362173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 10
               

               
Conread position:
               
264-521
               

               
Cow position:
               
chr27:8932555-8932289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
264-562
               

               
Cow position:
               
chr27:26919624-26919923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
46, 88
               

               
Conread position:
               
265-515
               

               
Cow position:
               
chr27:23882077-23882342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
42, 138
               

               
Conread position:
               
265-518
               

               
Cow position:
               
chr27:6541906-6541662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
13, 37
               

               
Conread position:
               
265-527
               

               
Cow position:
               
chr27:26581158-26581409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
42, 155
               

               
Conread position:
               
265-555
               

               
Cow position:
               
chr27:19589763-19589462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
42, 86
               

               
Conread position:
               
266-511
               

               
Cow position:
               
chr27:28931502-28931754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 59
               

               
Conread position:
               
267-521
               

               
Cow position:
               
chr27:12502844-12503104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
41, 113
               

               
Conread position:
               
268-518
               

               
Cow position:
               
chr27:29400102-29399848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
20, 58
               

               
Conread position:
               
268-520
               

               
Cow position:
               
chr27:7971855-7971600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
268-559
               

               
Cow position:
               
chr27:28189932-28190232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 212
               

               
Conread position:
               
270-571
               

               
Cow position:
               
chr27:13843487-13843198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
37, 91
               

               
Conread position:
               
271-512
               

               
Cow position:
               
chr27:22723431-22723666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
210, 34
               

               
Conread position:
               
271-520
               

               
Cow position:
               
chr27:2643657-2643893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
36, 6
               

               
Conread position:
               
271-521
               

               
Cow position:
               
chr27:14633120-14632867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
36, 123
               

               
Conread position:
               
272-521
               

               
Cow position:
               
chr27:1522893-1523149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
275-518
               

               
Cow position:
               
chr27:21139103-21138856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
32, 17
               

               
Conread position:
               
278-521
               

               
Cow position:
               
chr27:773428-773178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
281-518
               

               
Cow position:
               
chr27:21668853-21669090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
26, 95
               

               
Conread position:
               
282-518
               

               
Cow position:
               
chr27:23483496-23483260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
25, 149
               

               
Conread position:
               
283-486
               

               
Cow position:
               
chr27:18507901-18507699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
23, 11
               

               
Conread position:
               
285-491
               

               
Cow position:
               
chr27:7412651-7412440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
22, 197
               

               
Conread position:
               
285-498
               

               
Cow position:
               
chr27:20067719-20067925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
22, 49
               

               
Conread position:
               
285-518
               

               
Cow position:
               
chr27:12429680-12429433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
25, 81
               

               
Conread position:
               
285-521
               

               
Cow position:
               
chr27:19552160-19552403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
285-521
               

               
Cow position:
               
chr27:26952805-26952559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
285-579
               

               
Cow position:
               
chr27:14906999-14906694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
22, 94
               

               
Conread position:
               
285-589
               

               
Cow position:
               
chr27:30406763-30407079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
29, 201
               

               
Conread position:
               
285-589
               

               
Cow position:
               
chr27:31372712-31373025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
22, 53
               

               
Conread position:
               
286-520
               

               
Cow position:
               
chr27:6909773-6909537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
21, 91
               

               
Conread position:
               
287-453
               

               
Cow position:
               
chr27:27455191-27455354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
25, 84
               

               
Conread position:
               
287-521
               

               
Cow position:
               
chr27:27699759-27700000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
287-521
               

               
Cow position:
               
chr27:29198279-29198520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
287-561
               

               
Cow position:
               
chr27:6550717-6550439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
21, 144
               

               
Conread position:
               
289-521
               

               
Cow position:
               
chr27:667998-668237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
289-562
               

               
Cow position:
               
chr27:2957668-2957386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
13, 39
               

               
Conread position:
               
291-560
               

               
Cow position:
               
chr27:31147410-31147687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
11, 138
               

               
Conread position:
               
292-521
               

               
Cow position:
               
chr27:11273828-11273606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
15, 38
               

               
Conread position:
               
294-518
               

               
Cow position:
               
chr27:27843734-27843962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
9, 189
               

               
Conread position:
               
296-512
               

               
Cow position:
               
chr27:16263590-16263374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
11, 60
               

               
Conread position:
               
296-512
               

               
Cow position:
               
chr27:26508904-26509122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
15, 63
               

               
Conread position:
               
296-515
               

               
Cow position:
               
chr27:26436619-26436845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
152, 70
               

               
Conread position:
               
298-522
               

               
Cow position:
               
chr27:11081450-11081225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
7, 85
               

               
Conread position:
               
302-561
               

               
Cow position:
               
chr27:28518534-28518277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 64
               

               
Conread position:
               
304-476
               

               
Cow position:
               
chr27:22293465-22293635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
304-491
               

               
Cow position:
               
chr27:27388781-27388962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
62, 52
               

               
Conread position:
               
304-512
               

               
Cow position:
               
chr27:2930349-2930560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
178, 0
               

               
Conread position:
               
304-512
               

               
Cow position:
               
chr27:12516444-12516230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
111, 22
               

               
Conread position:
               
304-589
               

               
Cow position:
               
chr27:15203984-15204271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
136, 215
               

               
Conread position:
               
305-521
               

               
Cow position:
               
chr27:7425893-7426114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
129, 205
               

               
Conread position:
               
305-521
               

               
Cow position:
               
chr27:27622768-27622988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
129, 8
               

               
Conread position:
               
306-491
               

               
Cow position:
               
chr27:24014496-24014679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
306-521
               

               
Cow position:
               
chr27:3638579-3638799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
306-521
               

               
Cow position:
               
chr27:13837561-13837341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
306-571
               

               
Cow position:
               
chr27:160735-160467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
128, 242
               

               
Conread position:
               
307-482
               

               
Cow position:
               
chr27:22608892-22609070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
126, 173
               

               
Conread position:
               
308-518
               

               
Cow position:
               
chr27:30890529-30890320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
125, 22
               

               
Conread position:
               
309-566
               

               
Cow position:
               
chr27:16284715-16284454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
35, 58
               

               
Conread position:
               
309-606
               

               
Cow position:
               
chr27:22220796-22220495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
126, 187
               

               
Conread position:
               
309-614
               

               
Cow position:
               
chr27:10980106-10979795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
126, 242
               

               
Conread position:
               
310-512
               

               
Cow position:
               
chr27:23930205-23930015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
312-512
               

               
Cow position:
               
chr27:14902410-14902613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
113, 48
               

               
Conread position:
               
314-491
               

               
Cow position:
               
chr27:26440821-26440999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
121, 34
               

               
Conread position:
               
314-493
               

               
Cow position:
               
chr27:26935681-26935860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
52, 177
               

               
Conread position:
               
314-498
               

               
Cow position:
               
chr27:11815522-11815709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
169, 0
               
UCSC Genome Browser

               
Conread position:
               
314-511
               

               
Cow position:
               
chr27:6500302-6500098 (view  custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
121, 0
               
UCSC Genome Browser

               
               
               
Conread position:
314-518

               
               
               
Cow position:
chr27:24331963-24331754 (view  custom track)

               
               
               
Alignm length:
210

               
               
               
Alignm identity:
152

               
               
               
Alignm E-value:
2e-31

               
               
               
Alignm gaps (pig, cow):
127, 0
UCSC Genome Browser

               
               
               
Conread position:
317-498

               
               
               
Cow position:
chr27:26643907-26643733 (view  custom track)

               
               
               
Alignm length:
183

               
               
               
Alignm identity:
132

               
               
               
Alignm E-value:
2e-22

               
               
               
Alignm gaps (pig, cow):
174, 93

               
               
               Conread position:317-518
               
               
               Cow position:chr27:22498788-22498590 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:206
               
               
               Alignm identity:151
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):23, 10

               
               
               Conread position:318-515
               
               
               Cow position:chr27:30354113-30354307 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:199
               
               
               Alignm identity:145
               
               
               Alignm E-value:5e-30
               
               
               Alignm gaps (pig, cow):164, 14

               
               
               Conread position:318-519
               
               
               Cow position:chr27:28921663-28921865 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:204
               
               
               Alignm identity:147
               
               
               Alignm E-value:5e-31
               
               
               Alignm gaps (pig, cow):117, 169

               
               
               Conread position:318-520
               
               
               Cow position:chr27:29038706-29038914 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:211
               
               
               Alignm identity:150
               
               
               Alignm E-value:9e-26
               
               
               Alignm gaps (pig, cow):16, 138

               
               
               Conread position:326-518
               
               
               Cow position:chr27:24321413-24321219 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:198
               
               
               Alignm identity:144
               
               
               Alignm E-value:3e-27
               
               
               Alignm gaps (pig, cow):108, 34

               
               
               Conread position:326-518
               
               
               Cow position:chr27:27640765-27640969 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:206
               
               
               Alignm identity:153
               
               
               Alignm E-value:4e-29
               
               
               Alignm gaps (pig, cow):12, 42

               
               
               Conread position:326-571
               
               
               Cow position:chr27:23554098-23554357 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:266
               
               
               Alignm identity:185
               
               
               Alignm E-value:6e-22
               
               
               Alignm gaps (pig, cow):109, 25

               
               
               Conread position:327-512
               
               
               Cow position:chr27:6058726-6058536 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:192
               
               
               Alignm identity:139
               
               
               Alignm E-value:9e-26
               
               
               Alignm gaps (pig, cow):108, 31

               
               
               Conread position:327-512
               
               
               Cow position:chr27:21418842-21419030 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:189
               
               
               Alignm identity:134
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):153, 0

               
               
               Conread position:327-518
               
               
               Cow position:chr27:26864895-26865087 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:195
               
               
               Alignm identity:139
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):98, 32

               
               
               Conread position:327-519
               
               
               Cow position:chr27:4390030-4390223 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:196
               
               
               Alignm identity:137
               
               
               Alignm E-value:8e-24
               
               
               Alignm gaps (pig, cow):107, 166

               
               
               Conread position:327-522
               
               
               Cow position:chr27:2011879-2012073 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:200
               
               
               Alignm identity:149
               
               
               Alignm E-value:5e-30
               
               
               Alignm gaps (pig, cow):125, 55

               
               
               Conread position:327-522
               
               
               Cow position:chr27:13638768-13638963 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:199
               
               
               Alignm identity:149
               
               
               Alignm E-value:6e-33
               
               
               Alignm gaps (pig, cow):154, 177

               
               
               Conread position:328-496
               
               
               Cow position:chr27:19577897-19577730 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:170
               
               
               Alignm identity:121
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):139, 31

               
               
               Conread position:328-515
               
               
               Cow position:chr27:25676458-25676260 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:200
               
               
               Alignm identity:143
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):12, 173

               
               
               Conread position:328-518
               
               
               Cow position:chr27:19543686-19543875 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:194
               
               
               Alignm identity:136
               
               
               Alignm E-value:7e-23
               
               
               Alignm gaps (pig, cow):149, 108

               
               
               Conread position:329-602
               
               
               Cow position:chr27:1183654-1183938 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:196
               
               
               Alignm E-value:4e-29
               
               
               Alignm gaps (pig, cow):119, 73

               
               
               Conread position:330-511
               
               
               Cow position:chr27:20796005-20795827 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:183
               
               
               Alignm identity:137
               
               
               Alignm E-value:5e-30
               
               
               Alignm gaps (pig, cow):161, 88

               
               
               Conread position:330-512
               
               
               Cow position:chr27:4812656-4812841 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:188
               
               
               Alignm identity:140
               
               
               Alignm E-value:4e-29
               
               
               Alignm gaps (pig, cow):105, 36

               
               
               Conread position:330-518
               
               
               Cow position:chr27:28038116-28038308 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:194
               
               
               Alignm identity:140
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):99, 152

               
               
               Conread position:330-568
               
               
               Cow position:chr27:2592762-2592520 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:251
               
               
               Alignm identity:179
               
               
               Alignm E-value:4e-28
               
               
               Alignm gaps (pig, cow):160, 30

               
               
               Conread position:332-512
               
               
               Cow position:chr27:18593488-18593306 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:187
               
               
               Alignm identity:138
               
               
               Alignm E-value:3e-25
               
               
               Alignm gaps (pig, cow):9, 29

               
               
               Conread position:332-518
               
               
               Cow position:chr27:27259827-27259641 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:188
               
               
               Alignm identity:134
               
               
               Alignm E-value:3e-27
               
               
               Alignm gaps (pig, cow):159, 34

               
               
               Conread position:332-567
               
               
               Cow position:chr27:20765744-20765982 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:242
               
               
               Alignm identity:165
               
               
               Alignm E-value:8e-25
               
               
               Alignm gaps (pig, cow):148, 116

               
               
               Conread position:335-518
               
               
               Cow position:chr27:21452854-21453045 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:193
               
               
               Alignm identity:143
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):99, 31

               
               
               Conread position:335-521
               
               
               Cow position:chr27:2682927-2683114 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:189
               
               
               Alignm identity:130
               
               
               Alignm E-value:6e-22
               
               
               Alignm gaps (pig, cow):143, 114

               
               
               Conread position:335-525
               
               
               Cow position:chr27:20553933-20553746 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:191
               
               
               Alignm identity:138
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):119, 0

               
               
               Conread position:336-491
               
               
               Cow position:chr27:30551211-30551058 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:156
               
               
               Alignm identity:114
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):103, 0

               
               
               Conread position:336-498
               
               
               Cow position:chr27:20544165-20543993 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:174
               
               
               Alignm identity:129
               
               
               Alignm E-value:7e-23
               
               
               Alignm gaps (pig, cow):58, 165

               
               
               Conread position:336-503
               
               
               Cow position:chr27:27528146-27528313 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:168
               
               
               Alignm identity:118
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:336-522
               
               
               Cow position:chr27:22771973-22771782 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:194
               
               
               Alignm identity:143
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):110, 187

               
               
               Conread position:337-509
               
               
               Cow position:chr27:15668553-15668728 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:178
               
               
               Alignm identity:126
               
               
               Alignm E-value:5e-21
               
               
               Alignm gaps (pig, cow):113, 29

               
               
               Conread position:338-500
               
               
               Cow position:chr27:26406830-26406992 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:167
               
               
               Alignm identity:125
               
               
               Alignm E-value:8e-24
               
               
               Alignm gaps (pig, cow):97, 22

               
               
               Conread position:338-518
               
               
               Cow position:chr27:16871706-16871880 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:183
               
               
               Alignm identity:135
               
               
               Alignm E-value:3e-24
               
               
               Alignm gaps (pig, cow):117, 32

               
               
               Conread position:338-518
               
               
               Cow position:chr27:26239237-26239058 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:182
               
               
               Alignm identity:129
               
               
               Alignm E-value:3e-24
               
               
               Alignm gaps (pig, cow):153, 51

               
               
               Conread position:338-518
               
               
               Cow position:chr27:28164198-28164373 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:182
               
               
               Alignm identity:138
               
               
               Alignm E-value:5e-30
               
               
               Alignm gaps (pig, cow):154, 61

               
               
               Conread position:338-522
               
               
               Cow position:chr27:22454565-22454747 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:190
               
               
               Alignm identity:139
               
               
               Alignm E-value:6e-22
               
               
               Alignm gaps (pig, cow):5, 108

               
               
               Conread position:338-568
               
               
               Cow position:chr27:17926424-17926645 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:233
               
               
               Alignm identity:170
               
               
               Alignm E-value:5e-31
               
               
               Alignm gaps (pig, cow):153, 28

               
               
               Conread position:340-562
               
               
               Cow position:chr27:30359606-30359385 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:232
               
               
               Alignm identity:164
               
               
               Alignm E-value:7e-23
               
               
               Alignm gaps (pig, cow):173, 52

               
               
               Conread position:344-512
               
               
               Cow position:chr27:20354787-20354623 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:170
               
               
               Alignm identity:128
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):147, 80

               
               
               Conread position:345-518
               
               
               Cow position:chr27:27055784-27055607 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:179
               
               
               Alignm identity:130
               
               
               Alignm E-value:8e-24
               
               
               Alignm gaps (pig, cow):90, 137

               
               
               Conread position:346-520
               
               
               Cow position:chr27:18215261-18215081 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:181
               
               
               Alignm identity:135
               
               
               Alignm E-value:4e-28
               
               
               Alignm gaps (pig, cow):95, 0

               
               
               Conread position:346-554
               
               
               Cow position:chr27:25277340-25277129 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:219
               
               
               Alignm identity:160
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):139, 5

               
               
               Conread position:347-515
               
               
               Cow position:chr27:29251084-29250912 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:173
               
               
               Alignm identity:125
               
               
               Alignm E-value:3e-24
               
               
               Alignm gaps (pig, cow):88, 0

               
               
               Conread position:348-516
               
               
               Cow position:chr27:1884241-1884072 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:171
               
               
               Alignm identity:124
               
               
               Alignm E-value:8e-25
               
               
               Alignm gaps (pig, cow):37, 131

               
               
               Conread position:348-589
               
               
               Cow position:chr27:1498517-1498273 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:249
               
               
               Alignm identity:169
               
               
               Alignm E-value:8e-24
               
               
               Alignm gaps (pig, cow):145, 66

               
               
               Conread position:348-613
               
               
               Cow position:chr27:19685511-19685780 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:277
               
               
               Alignm identity:191
               
               
               Alignm E-value:3e-27
               
               
               Alignm gaps (pig, cow):143, 87

               
               
               Conread position:349-488
               
               
               Cow position:chr27:13847841-13847701 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:141
               
               
               Alignm identity:105
               
               
               Alignm E-value:7e-23
               
               
               Alignm gaps (pig, cow):135, 0

               
               
               Conread position:349-515
               
               
               Cow position:chr27:27003079-27003238 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:167
               
               
               Alignm identity:123
               
               
               Alignm E-value:7e-23
               
               
               Alignm gaps (pig, cow):76, 0

               
               
               Conread position:352-512
               
               
               Cow position:chr27:21569644-21569804 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:163
               
               
               Alignm identity:118
               
               
               Alignm E-value:6e-22
               
               
               Alignm gaps (pig, cow):132, 111

               
               
               Conread position:352-518
               
               
               Cow position:chr27:18030860-18031030 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:174
               
               
               Alignm identity:131
               
               
               Alignm E-value:3e-25
               
               
               Alignm gaps (pig, cow):83, 23

               
               
               Conread position:353-562
               
               
               Cow position:chr27:30915200-30914987 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:219
               
               
               Alignm identity:154
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):168, 83

               
               
               Conread position:354-567
               
               
               Cow position:chr27:30843881-30844100 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:224
               
               
               Alignm identity:157
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):63, 83

               
               
               Conread position:357-567
               
               
               Cow position:chr27:30670932-30670718 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:216
               
               
               Alignm identity:148
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):134, 92

               
               
               Conread position:357-568
               
               
               Cow position:chr27:20592178-20591956 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:224
               
               
               Alignm identity:158
               
               
               Alignm E-value:9e-26
               
               
               Alignm gaps (pig, cow):121, 207

               
               
               Conread position:359-518
               
               
               Cow position:chr27:13252202-13252039 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:165
               
               
               Alignm identity:120
               
               
               Alignm E-value:6e-22
               
               
               Alignm gaps (pig, cow):83, 116

               
               
               Conread position:360-618
               
               
               Cow position:chr27:16705438-16705182 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:262
               
               
               Alignm identity:175
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):130, 172

               
               
               Conread position:361-568
               
               
               Cow position:chr27:20036938-20037139 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:209
               
               
               Alignm identity:147
               
               
               Alignm E-value:8e-25
               
               
               Alignm gaps (pig, cow):117, 71

               
               
               Conread position:366-556
               
               
               Cow position:chr27:22547219-22547422 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:205
               
               
               Alignm identity:146
               
               
               Alignm E-value:5e-21
               
               
               Alignm gaps (pig, cow):69, 116
Show alignments to all cow chromosomes.