Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8053B15.5 | 
| Conread position: | 110-484 | 
| Cow position: | chr6:22804817-22804435 (view UCSC Genome Browser custom track) | 
| Alignm length: | 388 | 
| Alignm identity: | 258 | 
| Alignm E-value: | 8e-38 | 
| Alignm gaps (pig, cow): | 30, 46 | 
| Conread position: | 155-338 | 
| Cow position: | chr6:43788918-43788740 (view UCSC Genome Browser custom track) | 
| Alignm length: | 187 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 17, 9 | 
| Conread position: | 159-521 | 
| Cow position: | chr6:8207746-8207377 (view UCSC Genome Browser custom track) | 
| Alignm length: | 372 | 
| Alignm identity: | 256 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 16, 7 | 
| Conread position: | 166-521 | 
| Cow position: | chr6:18080907-18080541 (view UCSC Genome Browser custom track) | 
| Alignm length: | 367 | 
| Alignm identity: | 256 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 65, 0 | 
| Conread position: | 168-334 | 
| Cow position: | chr6:2894840-2895007 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 6e-35 | 
| Alignm gaps (pig, cow): | 139, 12 | 
| Conread position: | 170-441 | 
| Cow position: | chr6:16618783-16619049 (view UCSC Genome Browser custom track) | 
| Alignm length: | 272 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 22, 0 | 
| Conread position: | 170-481 | 
| Cow position: | chr6:17456483-17456790 (view UCSC Genome Browser custom track) | 
| Alignm length: | 318 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 8e-28 | 
| Alignm gaps (pig, cow): | 40, 78 | 
| Conread position: | 170-561 | 
| Cow position: | chr6:8804930-8804515 (view UCSC Genome Browser custom track) | 
| Alignm length: | 421 | 
| Alignm identity: | 305 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 137, 126 | 
| Conread position: | 171-333 | 
| Cow position: | chr6:23366166-23365995 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 38, 0 | 
| Conread position: | 171-372 | 
| Cow position: | chr6:40238466-40238261 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 41, 0 | 
| Conread position: | 171-491 | 
| Cow position: | chr6:33865476-33865157 (view UCSC Genome Browser custom track) | 
| Alignm length: | 327 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 136, 191 | 
| Conread position: | 171-495 | 
| Cow position: | chr6:25783921-25784252 (view UCSC Genome Browser custom track) | 
| Alignm length: | 334 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 55, 212 | 
| Conread position: | 173-334 | 
| Cow position: | chr6:7104469-7104308 (view UCSC Genome Browser custom track) | 
| Alignm length: | 164 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 132, 7 | 
| Conread position: | 173-433 | 
| Cow position: | chr6:4164775-4164521 (view UCSC Genome Browser custom track) | 
| Alignm length: | 261 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 36, 0 | 
| Conread position: | 173-521 | 
| Cow position: | chr6:10044973-10045326 (view UCSC Genome Browser custom track) | 
| Alignm length: | 357 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 27, 7 | 
| Conread position: | 174-521 | 
| Cow position: | chr6:452250-452603 (view UCSC Genome Browser custom track) | 
| Alignm length: | 356 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 133, 17 | 
| Conread position: | 175-481 | 
| Cow position: | chr6:642975-642647 (view UCSC Genome Browser custom track) | 
| Alignm length: | 329 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 92, 0 | 
| Conread position: | 176-387 | 
| Cow position: | chr6:52209288-52209499 (view UCSC Genome Browser custom track) | 
| Alignm length: | 214 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 131, 12 | 
| Conread position: | 177-427 | 
| Cow position: | chr6:42416463-42416713 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 130, 66 | 
| Conread position: | 177-521 | 
| Cow position: | chr6:6614055-6614404 (view UCSC Genome Browser custom track) | 
| Alignm length: | 354 | 
| Alignm identity: | 247 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 52, 43 | 
| Conread position: | 179-327 | 
| Cow position: | chr6:46866170-46866021 (view UCSC Genome Browser custom track) | 
| Alignm length: | 151 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 6e-25 | 
| Alignm gaps (pig, cow): | 128, 72 | 
| Conread position: | 179-381 | 
| Cow position: | chr6:59296407-59296604 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 38, 0 | 
| Conread position: | 179-431 | 
| Cow position: | chr6:26667252-26666998 (view UCSC Genome Browser custom track) | 
| Alignm length: | 256 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 21, 35 | 
| Conread position: | 179-502 | 
| Cow position: | chr6:14064036-14063715 (view UCSC Genome Browser custom track) | 
| Alignm length: | 326 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 122, 188 | 
| Conread position: | 179-520 | 
| Cow position: | chr6:47783-47441 (view UCSC Genome Browser custom track) | 
| Alignm length: | 350 | 
| Alignm identity: | 249 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 128, 165 | 
| Conread position: | 179-521 | 
| Cow position: | chr6:12662558-12662209 (view UCSC Genome Browser custom track) | 
| Alignm length: | 351 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 21, 35 | 
| Conread position: | 179-521 | 
| Cow position: | chr6:42481653-42481999 (view UCSC Genome Browser custom track) | 
| Alignm length: | 350 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 128, 167 | 
| Conread position: | 179-521 | 
| Cow position: | chr6:45130301-45129952 (view UCSC Genome Browser custom track) | 
| Alignm length: | 350 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 128, 0 | 
| Conread position: | 179-521 | 
| Cow position: | chr6:60456453-60456798 (view UCSC Genome Browser custom track) | 
| Alignm length: | 349 | 
| Alignm identity: | 255 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 128, 149 | 
| Conread position: | 180-389 | 
| Cow position: | chr6:47977703-47977915 (view UCSC Genome Browser custom track) | 
| Alignm length: | 214 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 127, 170 | 
| Conread position: | 180-485 | 
| Cow position: | chr6:33147686-33147990 (view UCSC Genome Browser custom track) | 
| Alignm length: | 309 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 128, 46 | 
| Conread position: | 180-496 | 
| Cow position: | chr6:32867583-32867270 (view UCSC Genome Browser custom track) | 
| Alignm length: | 319 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 127, 297 | 
| Conread position: | 180-518 | 
| Cow position: | chr6:8636899-8637238 (view UCSC Genome Browser custom track) | 
| Alignm length: | 344 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 127, 40 | 
| Conread position: | 181-305 | 
| Cow position: | chr6:7302535-7302659 (view UCSC Genome Browser custom track) | 
| Alignm length: | 125 | 
| Alignm identity: | 95 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 181-334 | 
| Cow position: | chr6:67950553-67950708 (view UCSC Genome Browser custom track) | 
| Alignm length: | 156 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 124, 0 | 
| Conread position: | 181-442 | 
| Cow position: | chr6:12505954-12505692 (view UCSC Genome Browser custom track) | 
| Alignm length: | 269 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 9e-29 | 
| Alignm gaps (pig, cow): | 31, 150 | 
| Conread position: | 182-302 | 
| Cow position: | chr6:21184185-21184305 (view UCSC Genome Browser custom track) | 
| Alignm length: | 121 | 
| Alignm identity: | 94 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 182-305 | 
| Cow position: | chr6:51525963-51525840 (view UCSC Genome Browser custom track) | 
| Alignm length: | 124 | 
| Alignm identity: | 96 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 182-315 | 
| Cow position: | chr6:56885586-56885721 (view UCSC Genome Browser custom track) | 
| Alignm length: | 136 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-318 | 
| Cow position: | chr6:26914723-26914861 (view UCSC Genome Browser custom track) | 
| Alignm length: | 139 | 
| Alignm identity: | 108 | 
| Alignm E-value: | 7e-26 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-318 | 
| Cow position: | chr6:50114471-50114609 (view UCSC Genome Browser custom track) | 
| Alignm length: | 139 | 
| Alignm identity: | 108 | 
| Alignm E-value: | 7e-26 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-319 | 
| Cow position: | chr6:32420715-32420853 (view UCSC Genome Browser custom track) | 
| Alignm length: | 140 | 
| Alignm identity: | 106 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 125, 31 | 
| Conread position: | 182-319 | 
| Cow position: | chr6:38440588-38440733 (view UCSC Genome Browser custom track) | 
| Alignm length: | 146 | 
| Alignm identity: | 111 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 25, 0 | 
| Conread position: | 182-319 | 
| Cow position: | chr6:44131078-44130939 (view UCSC Genome Browser custom track) | 
| Alignm length: | 140 | 
| Alignm identity: | 107 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-320 | 
| Cow position: | chr6:18474282-18474146 (view UCSC Genome Browser custom track) | 
| Alignm length: | 139 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 124, 0 | 
| Conread position: | 182-320 | 
| Cow position: | chr6:56556837-56556697 (view UCSC Genome Browser custom track) | 
| Alignm length: | 141 | 
| Alignm identity: | 106 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-322 | 
| Cow position: | chr6:50983808-50983950 (view UCSC Genome Browser custom track) | 
| Alignm length: | 143 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-323 | 
| Cow position: | chr6:51581769-51581625 (view UCSC Genome Browser custom track) | 
| Alignm length: | 145 | 
| Alignm identity: | 107 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 61, 0 | 
| Conread position: | 182-323 | 
| Cow position: | chr6:59620265-59620409 (view UCSC Genome Browser custom track) | 
| Alignm length: | 146 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 38, 46 | 
| Conread position: | 182-323 | 
| Cow position: | chr6:59687370-59687513 (view UCSC Genome Browser custom track) | 
| Alignm length: | 144 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 25, 0 | 
| Conread position: | 182-324 | 
| Cow position: | chr6:31048924-31048780 (view UCSC Genome Browser custom track) | 
| Alignm length: | 146 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 56, 36 | 
| Conread position: | 182-325 | 
| Cow position: | chr6:240496-240644 (view UCSC Genome Browser custom track) | 
| Alignm length: | 149 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 24, 0 | 
| Conread position: | 182-329 | 
| Cow position: | chr6:32665205-32665354 (view UCSC Genome Browser custom track) | 
| Alignm length: | 150 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-329 | 
| Cow position: | chr6:53918103-53917954 (view UCSC Genome Browser custom track) | 
| Alignm length: | 151 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 7e-26 | 
| Alignm gaps (pig, cow): | 18, 32 | 
| Conread position: | 182-330 | 
| Cow position: | chr6:24659324-24659178 (view UCSC Genome Browser custom track) | 
| Alignm length: | 149 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 8e-28 | 
| Alignm gaps (pig, cow): | 115, 0 | 
| Conread position: | 182-331 | 
| Cow position: | chr6:40139521-40139372 (view UCSC Genome Browser custom track) | 
| Alignm length: | 152 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 123, 41 | 
| Conread position: | 182-333 | 
| Cow position: | chr6:16103624-16103470 (view UCSC Genome Browser custom track) | 
| Alignm length: | 155 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 8e-28 | 
| Alignm gaps (pig, cow): | 6, 0 | 
| Conread position: | 182-333 | 
| Cow position: | chr6:16288831-16288682 (view UCSC Genome Browser custom track) | 
| Alignm length: | 153 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 56, 36 | 
| Conread position: | 182-333 | 
| Cow position: | chr6:19044964-19045116 (view UCSC Genome Browser custom track) | 
| Alignm length: | 154 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 125, 57 | 
| Conread position: | 182-334 | 
| Cow position: | chr6:17344970-17345126 (view UCSC Genome Browser custom track) | 
| Alignm length: | 159 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 103, 44 | 
| Conread position: | 182-334 | 
| Cow position: | chr6:46860573-46860419 (view UCSC Genome Browser custom track) | 
| Alignm length: | 155 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 123, 0 | 
| Conread position: | 182-334 | 
| Cow position: | chr6:55143499-55143345 (view UCSC Genome Browser custom track) | 
| Alignm length: | 155 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-336 | 
| Cow position: | chr6:15182513-15182667 (view UCSC Genome Browser custom track) | 
| Alignm length: | 158 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 95, 44 | 
| Conread position: | 182-337 | 
| Cow position: | chr6:32300934-32300777 (view UCSC Genome Browser custom track) | 
| Alignm length: | 158 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-338 | 
| Cow position: | chr6:529081-528919 (view UCSC Genome Browser custom track) | 
| Alignm length: | 164 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 20, 143 | 
| Conread position: | 182-338 | 
| Cow position: | chr6:47640877-47640714 (view UCSC Genome Browser custom track) | 
| Alignm length: | 165 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 63, 44 | 
| Conread position: | 182-338 | 
| Cow position: | chr6:49685184-49685342 (view UCSC Genome Browser custom track) | 
| Alignm length: | 159 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 8e-28 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-338 | 
| Cow position: | chr6:53140769-53140612 (view UCSC Genome Browser custom track) | 
| Alignm length: | 159 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 57, 145 | 
| Conread position: | 182-338 | 
| Cow position: | chr6:57384129-57384283 (view UCSC Genome Browser custom track) | 
| Alignm length: | 157 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 120, 0 | 
| Conread position: | 182-338 | 
| Cow position: | chr6:66433544-66433699 (view UCSC Genome Browser custom track) | 
| Alignm length: | 159 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 6e-25 | 
| Alignm gaps (pig, cow): | 123, 36 | 
| Conread position: | 182-338 | 
| Cow position: | chr6:67304406-67304557 (view UCSC Genome Browser custom track) | 
| Alignm length: | 157 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 8e-27 | 
| Alignm gaps (pig, cow): | 124, 0 | 
| Conread position: | 182-340 | 
| Cow position: | chr6:457857-457697 (view UCSC Genome Browser custom track) | 
| Alignm length: | 163 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 109, 86 | 
| Conread position: | 182-340 | 
| Cow position: | chr6:539911-540069 (view UCSC Genome Browser custom track) | 
| Alignm length: | 162 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 123, 50 | 
| Conread position: | 182-340 | 
| Cow position: | chr6:47574554-47574721 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 118, 154 | 
| Conread position: | 182-340 | 
| Cow position: | chr6:53553119-53553278 (view UCSC Genome Browser custom track) | 
| Alignm length: | 161 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 125, 10 | 
| Conread position: | 182-341 | 
| Cow position: | chr6:1637182-1637021 (view UCSC Genome Browser custom track) | 
| Alignm length: | 162 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 5e-34 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-341 | 
| Cow position: | chr6:40774745-40774585 (view UCSC Genome Browser custom track) | 
| Alignm length: | 162 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 4e-31 | 
| Alignm gaps (pig, cow): | 125, 145 | 
| Conread position: | 182-342 | 
| Cow position: | chr6:25773852-25773691 (view UCSC Genome Browser custom track) | 
| Alignm length: | 163 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 8e-27 | 
| Alignm gaps (pig, cow): | 125, 147 | 
| Conread position: | 182-343 | 
| Cow position: | chr6:20515350-20515513 (view UCSC Genome Browser custom track) | 
| Alignm length: | 165 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 18, 32 | 
| Conread position: | 182-343 | 
| Cow position: | chr6:24988354-24988193 (view UCSC Genome Browser custom track) | 
| Alignm length: | 164 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 125, 36 | 
| Conread position: | 182-343 | 
| Cow position: | chr6:52697391-52697554 (view UCSC Genome Browser custom track) | 
| Alignm length: | 164 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 5e-33 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-345 | 
| Cow position: | chr6:29484737-29484904 (view UCSC Genome Browser custom track) | 
| Alignm length: | 168 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 8e-27 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-347 | 
| Cow position: | chr6:479321-479488 (view UCSC Genome Browser custom track) | 
| Alignm length: | 168 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 124, 0 | 
| Conread position: | 182-347 | 
| Cow position: | chr6:39330757-39330590 (view UCSC Genome Browser custom track) | 
| Alignm length: | 168 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 4e-31 | 
| Alignm gaps (pig, cow): | 121, 0 | 
| Conread position: | 182-347 | 
| Cow position: | chr6:47171818-47171985 (view UCSC Genome Browser custom track) | 
| Alignm length: | 168 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-348 | 
| Cow position: | chr6:89480-89312 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 9e-29 | 
| Alignm gaps (pig, cow): | 116, 0 | 
| Conread position: | 182-348 | 
| Cow position: | chr6:3484631-3484463 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 9e-29 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-348 | 
| Cow position: | chr6:27477627-27477796 (view UCSC Genome Browser custom track) | 
| Alignm length: | 170 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 5e-33 | 
| Alignm gaps (pig, cow): | 48, 0 | 
| Conread position: | 182-348 | 
| Cow position: | chr6:34494443-34494611 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-349 | 
| Cow position: | chr6:34115641-34115810 (view UCSC Genome Browser custom track) | 
| Alignm length: | 170 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 123, 0 | 
| Conread position: | 182-351 | 
| Cow position: | chr6:6459884-6460055 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-351 | 
| Cow position: | chr6:7111965-7111796 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 56, 121 | 
| Conread position: | 182-351 | 
| Cow position: | chr6:19695167-19695338 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-351 | 
| Cow position: | chr6:28136513-28136686 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 9e-29 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-351 | 
| Cow position: | chr6:28636403-28636232 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 18, 32 | 
| Conread position: | 182-351 | 
| Cow position: | chr6:40157761-40157587 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 44, 116 | 
| Conread position: | 182-351 | 
| Cow position: | chr6:60441770-60441932 (view UCSC Genome Browser custom track) | 
| Alignm length: | 170 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 8e-27 | 
| Alignm gaps (pig, cow): | 82, 0 | 
| Conread position: | 182-355 | 
| Cow position: | chr6:42131202-42131016 (view UCSC Genome Browser custom track) | 
| Alignm length: | 187 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 25, 0 | 
| Conread position: | 182-357 | 
| Cow position: | chr6:46246470-46246304 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 6e-25 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 182-357 | 
| Cow position: | chr6:61136793-61136967 (view UCSC Genome Browser custom track) | 
| Alignm length: | 177 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 133, 124 | 
| Conread position: | 182-358 | 
| Cow position: | chr6:10706285-10706104 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 24, 115 | 
| Conread position: | 182-358 | 
| Cow position: | chr6:31927675-31927850 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 8e-38 | 
| Alignm gaps (pig, cow): | 120, 106 | 
| Conread position: | 182-358 | 
| Cow position: | chr6:65866652-65866476 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 125, 46 | 
| Conread position: | 182-361 | 
| Cow position: | chr6:46283337-46283150 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-362 | 
| Cow position: | chr6:68048876-68049055 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 125, 61 | 
| Conread position: | 182-363 | 
| Cow position: | chr6:2324575-2324384 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 35, 62 | 
| Conread position: | 182-363 | 
| Cow position: | chr6:54979284-54979467 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 9e-39 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-365 | 
| Cow position: | chr6:16251815-16252005 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 39, 0 | 
| Conread position: | 182-366 | 
| Cow position: | chr6:39080692-39080878 (view UCSC Genome Browser custom track) | 
| Alignm length: | 187 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-367 | 
| Cow position: | chr6:11185199-11185386 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 8e-38 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-367 | 
| Cow position: | chr6:13597394-13597207 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 9e-39 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-367 | 
| Cow position: | chr6:14929219-14929405 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 4e-31 | 
| Alignm gaps (pig, cow): | 125, 150 | 
| Conread position: | 182-367 | 
| Cow position: | chr6:15310238-15310051 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-367 | 
| Cow position: | chr6:19707204-19707391 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 18, 32 | 
| Conread position: | 182-367 | 
| Cow position: | chr6:26771347-26771159 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 6e-36 | 
| Alignm gaps (pig, cow): | 18, 32 | 
| Conread position: | 182-367 | 
| Cow position: | chr6:45747232-45747045 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 9e-39 | 
| Alignm gaps (pig, cow): | 123, 0 | 
| Conread position: | 182-367 | 
| Cow position: | chr6:49444893-49445078 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 125, 179 | 
| Conread position: | 182-367 | 
| Cow position: | chr6:51468090-51468272 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 125, 142 | 
| Conread position: | 182-367 | 
| Cow position: | chr6:59076937-59076749 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-367 | 
| Cow position: | chr6:63714514-63714328 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 8e-38 | 
| Alignm gaps (pig, cow): | 125, 138 | 
| Conread position: | 182-370 | 
| Cow position: | chr6:8284002-8283812 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 6e-35 | 
| Alignm gaps (pig, cow): | 18, 32 | 
| Conread position: | 182-382 | 
| Cow position: | chr6:28156498-28156290 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 4e-31 | 
| Alignm gaps (pig, cow): | 45, 164 | 
| Conread position: | 182-385 | 
| Cow position: | chr6:19809304-19809506 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 125, 142 | 
| Conread position: | 182-386 | 
| Cow position: | chr6:63094432-63094638 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 123, 0 | 
| Conread position: | 182-386 | 
| Cow position: | chr6:65930997-65931211 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 125, 17 | 
| Conread position: | 182-388 | 
| Cow position: | chr6:50973529-50973323 (view UCSC Genome Browser custom track) | 
| Alignm length: | 214 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 8e-28 | 
| Alignm gaps (pig, cow): | 28, 125 | 
| Conread position: | 182-391 | 
| Cow position: | chr6:42106421-42106217 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 5e-33 | 
| Alignm gaps (pig, cow): | 125, 44 | 
| Conread position: | 182-400 | 
| Cow position: | chr6:21590356-21590562 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 125, 69 | 
| Conread position: | 182-401 | 
| Cow position: | chr6:1293640-1293418 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 125, 115 | 
| Conread position: | 182-401 | 
| Cow position: | chr6:31739170-31739397 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-405 | 
| Cow position: | chr6:58370192-58370427 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 9e-39 | 
| Alignm gaps (pig, cow): | 16, 0 | 
| Conread position: | 182-406 | 
| Cow position: | chr6:19712470-19712249 (view UCSC Genome Browser custom track) | 
| Alignm length: | 227 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 125, 40 | 
| Conread position: | 182-406 | 
| Cow position: | chr6:30892896-30892670 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 5e-33 | 
| Alignm gaps (pig, cow): | 31, 133 | 
| Conread position: | 182-406 | 
| Cow position: | chr6:38233617-38233834 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 6e-25 | 
| Alignm gaps (pig, cow): | 113, 68 | 
| Conread position: | 182-406 | 
| Cow position: | chr6:62979623-62979395 (view UCSC Genome Browser custom track) | 
| Alignm length: | 232 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 5e-33 | 
| Alignm gaps (pig, cow): | 28, 126 | 
| Conread position: | 182-406 | 
| Cow position: | chr6:64888720-64888940 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 30, 46 | 
| Conread position: | 182-414 | 
| Cow position: | chr6:20245709-20245943 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-415 | 
| Cow position: | chr6:32287244-32287479 (view UCSC Genome Browser custom track) | 
| Alignm length: | 238 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 7e-37 | 
| Alignm gaps (pig, cow): | 21, 181 | 
| Conread position: | 182-421 | 
| Cow position: | chr6:42420893-42421127 (view UCSC Genome Browser custom track) | 
| Alignm length: | 243 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 92, 35 | 
| Conread position: | 182-422 | 
| Cow position: | chr6:17050145-17050388 (view UCSC Genome Browser custom track) | 
| Alignm length: | 244 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 8e-38 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-424 | 
| Cow position: | chr6:55205816-55205570 (view UCSC Genome Browser custom track) | 
| Alignm length: | 249 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 18, 119 | 
| Conread position: | 182-425 | 
| Cow position: | chr6:58390249-58390004 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 18, 32 | 
| Conread position: | 182-427 | 
| Cow position: | chr6:28486886-28486640 (view UCSC Genome Browser custom track) | 
| Alignm length: | 248 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 6e-36 | 
| Alignm gaps (pig, cow): | 125, 187 | 
| Conread position: | 182-427 | 
| Cow position: | chr6:61548952-61548705 (view UCSC Genome Browser custom track) | 
| Alignm length: | 248 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-428 | 
| Cow position: | chr6:27240338-27240108 (view UCSC Genome Browser custom track) | 
| Alignm length: | 248 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 136, 57 | 
| Conread position: | 182-430 | 
| Cow position: | chr6:25374333-25374083 (view UCSC Genome Browser custom track) | 
| Alignm length: | 252 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 45, 35 | 
| Conread position: | 182-430 | 
| Cow position: | chr6:33466729-33466975 (view UCSC Genome Browser custom track) | 
| Alignm length: | 251 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 5e-34 | 
| Alignm gaps (pig, cow): | 43, 35 | 
| Conread position: | 182-430 | 
| Cow position: | chr6:55266000-55265754 (view UCSC Genome Browser custom track) | 
| Alignm length: | 251 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 119, 162 | 
| Conread position: | 182-433 | 
| Cow position: | chr6:3271706-3271451 (view UCSC Genome Browser custom track) | 
| Alignm length: | 257 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 3.99931e-42 | 
| Alignm gaps (pig, cow): | 84, 200 | 
| Conread position: | 182-433 | 
| Cow position: | chr6:3885732-3885478 (view UCSC Genome Browser custom track) | 
| Alignm length: | 255 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 63, 0 | 
| Conread position: | 182-433 | 
| Cow position: | chr6:6839361-6839612 (view UCSC Genome Browser custom track) | 
| Alignm length: | 260 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 24, 152 | 
| Conread position: | 182-433 | 
| Cow position: | chr6:8599413-8599667 (view UCSC Genome Browser custom track) | 
| Alignm length: | 257 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 77, 247 | 
| Conread position: | 182-433 | 
| Cow position: | chr6:11032568-11032315 (view UCSC Genome Browser custom track) | 
| Alignm length: | 254 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-433 | 
| Cow position: | chr6:14631214-14631469 (view UCSC Genome Browser custom track) | 
| Alignm length: | 256 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-433 | 
| Cow position: | chr6:17352228-17351975 (view UCSC Genome Browser custom track) | 
| Alignm length: | 254 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-433 | 
| Cow position: | chr6:19170910-19171163 (view UCSC Genome Browser custom track) | 
| Alignm length: | 254 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-433 | 
| Cow position: | chr6:20689697-20689450 (view UCSC Genome Browser custom track) | 
| Alignm length: | 254 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 125, 40 | 
| Conread position: | 182-433 | 
| Cow position: | chr6:23879284-23879031 (view UCSC Genome Browser custom track) | 
| Alignm length: | 255 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 18, 32 | 
| Conread position: | 182-433 | 
| Cow position: | chr6:24243060-24243307 (view UCSC Genome Browser custom track) | 
| Alignm length: | 256 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 28, 57 | 
| Conread position: | 182-433 | 
| Cow position: | chr6:24965545-24965291 (view UCSC Genome Browser custom track) | 
| Alignm length: | 258 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 44, 144 | 
| Conread position: | 182-433 | 
| Cow position: | chr6:27401457-27401206 (view UCSC Genome Browser custom track) | 
| Alignm length: | 254 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 125, 187 | 
| Conread position: | 182-433 | 
| Cow position: | chr6:30708422-30708169 (view UCSC Genome Browser custom track) | 
| Alignm length: | 254 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-433 | 
| Cow position: | chr6:31752677-31752928 (view UCSC Genome Browser custom track) | 
| Alignm length: | 255 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 45, 35 | 
| Conread position: | 182-433 | 
| Cow position: | chr6:40975938-40976191 (view UCSC Genome Browser custom track) | 
| Alignm length: | 254 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-433 | 
| Cow position: | chr6:43345829-43345582 (view UCSC Genome Browser custom track) | 
| Alignm length: | 254 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 125, 149 | 
| Conread position: | 182-433 | 
| Cow position: | chr6:44017048-44016794 (view UCSC Genome Browser custom track) | 
| Alignm length: | 256 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 50, 239 | 
| Conread position: | 182-433 | 
| Cow position: | chr6:46584909-46585164 (view UCSC Genome Browser custom track) | 
| Alignm length: | 257 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 62, 56 | 
| Conread position: | 182-433 | 
| Cow position: | chr6:47773598-47773334 (view UCSC Genome Browser custom track) | 
| Alignm length: | 268 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 25, 174 | 
| Conread position: | 182-433 | 
| Cow position: | chr6:51150671-51150922 (view UCSC Genome Browser custom track) | 
| Alignm length: | 255 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 18, 32 | 
| Conread position: | 182-433 | 
| Cow position: | chr6:52216130-52215877 (view UCSC Genome Browser custom track) | 
| Alignm length: | 260 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 123, 182 | 
| Conread position: | 182-433 | 
| Cow position: | chr6:52235621-52235368 (view UCSC Genome Browser custom track) | 
| Alignm length: | 260 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 123, 182 | 
| Conread position: | 182-433 | 
| Cow position: | chr6:61066706-61066964 (view UCSC Genome Browser custom track) | 
| Alignm length: | 260 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 4e-31 | 
| Alignm gaps (pig, cow): | 24, 201 | 
| Conread position: | 182-433 | 
| Cow position: | chr6:62323407-62323154 (view UCSC Genome Browser custom track) | 
| Alignm length: | 255 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 18, 34 | 
| Conread position: | 182-433 | 
| Cow position: | chr6:64895707-64895961 (view UCSC Genome Browser custom track) | 
| Alignm length: | 259 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 37, 101 | 
| Conread position: | 182-433 | 
| Cow position: | chr6:65016264-65016012 (view UCSC Genome Browser custom track) | 
| Alignm length: | 254 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 130, 57 | 
| Conread position: | 182-439 | 
| Cow position: | chr6:43394307-43394551 (view UCSC Genome Browser custom track) | 
| Alignm length: | 261 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 6e-35 | 
| Alignm gaps (pig, cow): | 33, 91 | 
| Conread position: | 182-442 | 
| Cow position: | chr6:33509207-33509468 (view UCSC Genome Browser custom track) | 
| Alignm length: | 269 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 6e-35 | 
| Alignm gaps (pig, cow): | 123, 31 | 
| Conread position: | 182-463 | 
| Cow position: | chr6:68272496-68272216 (view UCSC Genome Browser custom track) | 
| Alignm length: | 289 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 9e-39 | 
| Alignm gaps (pig, cow): | 125, 85 | 
| Conread position: | 182-467 | 
| Cow position: | chr6:68252409-68252694 (view UCSC Genome Browser custom track) | 
| Alignm length: | 288 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 255 | 
| Conread position: | 182-468 | 
| Cow position: | chr6:41357418-41357707 (view UCSC Genome Browser custom track) | 
| Alignm length: | 296 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 27, 184 | 
| Conread position: | 182-470 | 
| Cow position: | chr6:366841-367131 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 7e-37 | 
| Alignm gaps (pig, cow): | 120, 286 | 
| Conread position: | 182-473 | 
| Cow position: | chr6:33884308-33884011 (view UCSC Genome Browser custom track) | 
| Alignm length: | 298 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-473 | 
| Cow position: | chr6:40450400-40450688 (view UCSC Genome Browser custom track) | 
| Alignm length: | 295 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 120, 23 | 
| Conread position: | 182-473 | 
| Cow position: | chr6:41876426-41876137 (view UCSC Genome Browser custom track) | 
| Alignm length: | 294 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 5.00264e-43 | 
| Alignm gaps (pig, cow): | 125, 150 | 
| Conread position: | 182-474 | 
| Cow position: | chr6:2668683-2668384 (view UCSC Genome Browser custom track) | 
| Alignm length: | 301 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 18, 32 | 
| Conread position: | 182-474 | 
| Cow position: | chr6:6471145-6470852 (view UCSC Genome Browser custom track) | 
| Alignm length: | 301 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 9e-39 | 
| Alignm gaps (pig, cow): | 125, 55 | 
| Conread position: | 182-474 | 
| Cow position: | chr6:7801738-7801446 (view UCSC Genome Browser custom track) | 
| Alignm length: | 296 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 128, 69 | 
| Conread position: | 182-474 | 
| Cow position: | chr6:10682367-10682665 (view UCSC Genome Browser custom track) | 
| Alignm length: | 301 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 5.00264e-43 | 
| Alignm gaps (pig, cow): | 40, 197 | 
| Conread position: | 182-474 | 
| Cow position: | chr6:41158546-41158248 (view UCSC Genome Browser custom track) | 
| Alignm length: | 299 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 5.00264e-43 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-476 | 
| Cow position: | chr6:5866768-5866462 (view UCSC Genome Browser custom track) | 
| Alignm length: | 311 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 15, 266 | 
| Conread position: | 182-476 | 
| Cow position: | chr6:11789021-11789322 (view UCSC Genome Browser custom track) | 
| Alignm length: | 303 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 24, 294 | 
| Conread position: | 182-476 | 
| Cow position: | chr6:33921628-33921332 (view UCSC Genome Browser custom track) | 
| Alignm length: | 301 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 75, 148 | 
| Conread position: | 182-479 | 
| Cow position: | chr6:27942659-27942961 (view UCSC Genome Browser custom track) | 
| Alignm length: | 308 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 9e-39 | 
| Alignm gaps (pig, cow): | 32, 184 | 
| Conread position: | 182-480 | 
| Cow position: | chr6:2074273-2074571 (view UCSC Genome Browser custom track) | 
| Alignm length: | 303 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 25, 32 | 
| Conread position: | 182-480 | 
| Cow position: | chr6:11704817-11705124 (view UCSC Genome Browser custom track) | 
| Alignm length: | 311 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 43, 162 | 
| Conread position: | 182-480 | 
| Cow position: | chr6:14932101-14931796 (view UCSC Genome Browser custom track) | 
| Alignm length: | 310 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 30, 266 | 
| Conread position: | 182-480 | 
| Cow position: | chr6:27093812-27093508 (view UCSC Genome Browser custom track) | 
| Alignm length: | 307 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 18, 32 | 
| Conread position: | 182-480 | 
| Cow position: | chr6:33852164-33851866 (view UCSC Genome Browser custom track) | 
| Alignm length: | 307 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 5e-33 | 
| Alignm gaps (pig, cow): | 45, 190 | 
| Conread position: | 182-480 | 
| Cow position: | chr6:54433396-54433081 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 24, 0 | 
| Conread position: | 182-481 | 
| Cow position: | chr6:43621794-43622094 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 120, 35 | 
| Conread position: | 182-482 | 
| Cow position: | chr6:7253813-7253495 (view UCSC Genome Browser custom track) | 
| Alignm length: | 320 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 35, 16 | 
| Conread position: | 182-482 | 
| Cow position: | chr6:12387700-12387397 (view UCSC Genome Browser custom track) | 
| Alignm length: | 308 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 5.04467e-44 | 
| Alignm gaps (pig, cow): | 36, 160 | 
| Conread position: | 182-482 | 
| Cow position: | chr6:16417916-16417611 (view UCSC Genome Browser custom track) | 
| Alignm length: | 308 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 18, 32 | 
| Conread position: | 182-482 | 
| Cow position: | chr6:44906104-44906418 (view UCSC Genome Browser custom track) | 
| Alignm length: | 318 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 28, 137 | 
| Conread position: | 182-483 | 
| Cow position: | chr6:1174876-1174571 (view UCSC Genome Browser custom track) | 
| Alignm length: | 310 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 120, 156 | 
| Conread position: | 182-483 | 
| Cow position: | chr6:2088284-2088590 (view UCSC Genome Browser custom track) | 
| Alignm length: | 310 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 6e-35 | 
| Alignm gaps (pig, cow): | 44, 170 | 
| Conread position: | 182-483 | 
| Cow position: | chr6:4468385-4468685 (view UCSC Genome Browser custom track) | 
| Alignm length: | 313 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 82, 121 | 
| Conread position: | 182-483 | 
| Cow position: | chr6:5276042-5275744 (view UCSC Genome Browser custom track) | 
| Alignm length: | 313 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 18, 67 | 
| Conread position: | 182-483 | 
| Cow position: | chr6:6596212-6596504 (view UCSC Genome Browser custom track) | 
| Alignm length: | 308 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 35, 108 | 
| Conread position: | 182-483 | 
| Cow position: | chr6:13741323-13741623 (view UCSC Genome Browser custom track) | 
| Alignm length: | 303 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 124, 152 | 
| Conread position: | 182-483 | 
| Cow position: | chr6:25358702-25359003 (view UCSC Genome Browser custom track) | 
| Alignm length: | 310 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 96, 91 | 
| Conread position: | 182-483 | 
| Cow position: | chr6:31953057-31952744 (view UCSC Genome Browser custom track) | 
| Alignm length: | 318 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 10, 115 | 
| Conread position: | 182-483 | 
| Cow position: | chr6:36918547-36918247 (view UCSC Genome Browser custom track) | 
| Alignm length: | 311 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 35, 99 | 
| Conread position: | 182-483 | 
| Cow position: | chr6:46391320-46391621 (view UCSC Genome Browser custom track) | 
| Alignm length: | 306 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 5.04467e-44 | 
| Alignm gaps (pig, cow): | 46, 143 | 
| Conread position: | 182-484 | 
| Cow position: | chr6:11169333-11169634 (view UCSC Genome Browser custom track) | 
| Alignm length: | 307 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 179 | 
| Conread position: | 182-485 | 
| Cow position: | chr6:4948567-4948877 (view UCSC Genome Browser custom track) | 
| Alignm length: | 311 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-485 | 
| Cow position: | chr6:11442197-11441889 (view UCSC Genome Browser custom track) | 
| Alignm length: | 311 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 125, 246 | 
| Conread position: | 182-485 | 
| Cow position: | chr6:19103132-19102822 (view UCSC Genome Browser custom track) | 
| Alignm length: | 311 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-485 | 
| Cow position: | chr6:25218554-25218863 (view UCSC Genome Browser custom track) | 
| Alignm length: | 310 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-485 | 
| Cow position: | chr6:37331587-37331891 (view UCSC Genome Browser custom track) | 
| Alignm length: | 310 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 37, 238 | 
| Conread position: | 182-485 | 
| Cow position: | chr6:46371819-46371511 (view UCSC Genome Browser custom track) | 
| Alignm length: | 312 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 18, 32 | 
| Conread position: | 182-485 | 
| Cow position: | chr6:49579872-49580182 (view UCSC Genome Browser custom track) | 
| Alignm length: | 312 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 18, 32 | 
| Conread position: | 182-485 | 
| Cow position: | chr6:53448672-53448983 (view UCSC Genome Browser custom track) | 
| Alignm length: | 313 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 42, 291 | 
| Conread position: | 182-485 | 
| Cow position: | chr6:63040560-63040250 (view UCSC Genome Browser custom track) | 
| Alignm length: | 311 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-486 | 
| Cow position: | chr6:76667-76357 (view UCSC Genome Browser custom track) | 
| Alignm length: | 312 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 18, 32 | 
| Conread position: | 182-486 | 
| Cow position: | chr6:180738-180432 (view UCSC Genome Browser custom track) | 
| Alignm length: | 312 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 3.99931e-42 | 
| Alignm gaps (pig, cow): | 123, 179 | 
| Conread position: | 182-486 | 
| Cow position: | chr6:22877526-22877230 (view UCSC Genome Browser custom track) | 
| Alignm length: | 307 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 31 | 
| Conread position: | 182-489 | 
| Cow position: | chr6:33215747-33215435 (view UCSC Genome Browser custom track) | 
| Alignm length: | 321 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 115, 31 | 
| Conread position: | 182-491 | 
| Cow position: | chr6:5501171-5500852 (view UCSC Genome Browser custom track) | 
| Alignm length: | 323 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 28, 62 | 
| Conread position: | 182-491 | 
| Cow position: | chr6:19843048-19843364 (view UCSC Genome Browser custom track) | 
| Alignm length: | 317 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-492 | 
| Cow position: | chr6:14388951-14388634 (view UCSC Genome Browser custom track) | 
| Alignm length: | 318 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-492 | 
| Cow position: | chr6:20215621-20215304 (view UCSC Genome Browser custom track) | 
| Alignm length: | 319 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 32 | 
| Conread position: | 182-492 | 
| Cow position: | chr6:45901218-45900901 (view UCSC Genome Browser custom track) | 
| Alignm length: | 318 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 5.00264e-43 | 
| Alignm gaps (pig, cow): | 120, 0 | 
| Conread position: | 182-494 | 
| Cow position: | chr6:45617820-45617498 (view UCSC Genome Browser custom track) | 
| Alignm length: | 324 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 45, 319 | 
| Conread position: | 182-495 | 
| Cow position: | chr6:24652555-24652247 (view UCSC Genome Browser custom track) | 
| Alignm length: | 318 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 154 | 
| Conread position: | 182-495 | 
| Cow position: | chr6:34549030-34549351 (view UCSC Genome Browser custom track) | 
| Alignm length: | 327 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 45, 189 | 
| Conread position: | 182-495 | 
| Cow position: | chr6:45666165-45665845 (view UCSC Genome Browser custom track) | 
| Alignm length: | 321 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-496 | 
| Cow position: | chr6:126333-126013 (view UCSC Genome Browser custom track) | 
| Alignm length: | 321 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 120, 0 | 
| Conread position: | 182-496 | 
| Cow position: | chr6:5302773-5302467 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 296, 34 | 
| Conread position: | 182-496 | 
| Cow position: | chr6:10266360-10266040 (view UCSC Genome Browser custom track) | 
| Alignm length: | 323 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 125, 235 | 
| Conread position: | 182-496 | 
| Cow position: | chr6:16645646-16645967 (view UCSC Genome Browser custom track) | 
| Alignm length: | 323 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 32 | 
| Conread position: | 182-496 | 
| Cow position: | chr6:29077351-29077670 (view UCSC Genome Browser custom track) | 
| Alignm length: | 323 | 
| Alignm identity: | 231 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 29, 114 | 
| Conread position: | 182-498 | 
| Cow position: | chr6:14690580-14690899 (view UCSC Genome Browser custom track) | 
| Alignm length: | 323 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 123, 40 | 
| Conread position: | 182-498 | 
| Cow position: | chr6:24327516-24327195 (view UCSC Genome Browser custom track) | 
| Alignm length: | 326 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 23, 201 | 
| Conread position: | 182-498 | 
| Cow position: | chr6:27852082-27851764 (view UCSC Genome Browser custom track) | 
| Alignm length: | 323 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 36, 193 | 
| Conread position: | 182-498 | 
| Cow position: | chr6:55688676-55688985 (view UCSC Genome Browser custom track) | 
| Alignm length: | 326 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 125, 31 | 
| Conread position: | 182-498 | 
| Cow position: | chr6:60017698-60018009 (view UCSC Genome Browser custom track) | 
| Alignm length: | 322 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 31, 36 | 
| Conread position: | 182-498 | 
| Cow position: | chr6:65711452-65711774 (view UCSC Genome Browser custom track) | 
| Alignm length: | 323 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-502 | 
| Cow position: | chr6:28791459-28791783 (view UCSC Genome Browser custom track) | 
| Alignm length: | 326 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 119 | 
| Conread position: | 182-503 | 
| Cow position: | chr6:17364735-17364408 (view UCSC Genome Browser custom track) | 
| Alignm length: | 328 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-503 | 
| Cow position: | chr6:17631995-17631666 (view UCSC Genome Browser custom track) | 
| Alignm length: | 330 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-503 | 
| Cow position: | chr6:18911959-18911631 (view UCSC Genome Browser custom track) | 
| Alignm length: | 329 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-503 | 
| Cow position: | chr6:54202269-54201941 (view UCSC Genome Browser custom track) | 
| Alignm length: | 329 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-504 | 
| Cow position: | chr6:6568459-6568138 (view UCSC Genome Browser custom track) | 
| Alignm length: | 328 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 258, 106 | 
| Conread position: | 182-504 | 
| Cow position: | chr6:23117774-23117445 (view UCSC Genome Browser custom track) | 
| Alignm length: | 330 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-505 | 
| Cow position: | chr6:1278885-1278560 (view UCSC Genome Browser custom track) | 
| Alignm length: | 327 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 3.99931e-42 | 
| Alignm gaps (pig, cow): | 125, 82 | 
| Conread position: | 182-505 | 
| Cow position: | chr6:19570156-19569832 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 121, 35 | 
| Conread position: | 182-505 | 
| Cow position: | chr6:39998706-39998376 (view UCSC Genome Browser custom track) | 
| Alignm length: | 332 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 125, 319 | 
| Conread position: | 182-505 | 
| Cow position: | chr6:43188518-43188847 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 123, 179 | 
| Conread position: | 182-506 | 
| Cow position: | chr6:181767-181451 (view UCSC Genome Browser custom track) | 
| Alignm length: | 328 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 125, 106 | 
| Conread position: | 182-506 | 
| Cow position: | chr6:3445042-3444719 (view UCSC Genome Browser custom track) | 
| Alignm length: | 332 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 125, 79 | 
| Conread position: | 182-506 | 
| Cow position: | chr6:6768902-6769227 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 247 | 
| Conread position: | 182-506 | 
| Cow position: | chr6:8205962-8206292 (view UCSC Genome Browser custom track) | 
| Alignm length: | 332 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 226 | 
| Conread position: | 182-506 | 
| Cow position: | chr6:10598754-10599069 (view UCSC Genome Browser custom track) | 
| Alignm length: | 327 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 4e-31 | 
| Alignm gaps (pig, cow): | 125, 105 | 
| Conread position: | 182-506 | 
| Cow position: | chr6:15275466-15275135 (view UCSC Genome Browser custom track) | 
| Alignm length: | 332 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-506 | 
| Cow position: | chr6:25789962-25789629 (view UCSC Genome Browser custom track) | 
| Alignm length: | 334 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-506 | 
| Cow position: | chr6:28343276-28343599 (view UCSC Genome Browser custom track) | 
| Alignm length: | 329 | 
| Alignm identity: | 231 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 123, 162 | 
| Conread position: | 182-506 | 
| Cow position: | chr6:33460717-33461036 (view UCSC Genome Browser custom track) | 
| Alignm length: | 328 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 89 | 
| Conread position: | 182-506 | 
| Cow position: | chr6:41232237-41232565 (view UCSC Genome Browser custom track) | 
| Alignm length: | 332 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 69 | 
| Conread position: | 182-506 | 
| Cow position: | chr6:54218293-54218627 (view UCSC Genome Browser custom track) | 
| Alignm length: | 336 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 14, 183 | 
| Conread position: | 182-506 | 
| Cow position: | chr6:65844831-65845155 (view UCSC Genome Browser custom track) | 
| Alignm length: | 328 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 179 | 
| Conread position: | 182-506 | 
| Cow position: | chr6:68830068-68830399 (view UCSC Genome Browser custom track) | 
| Alignm length: | 333 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 46, 176 | 
| Conread position: | 182-507 | 
| Cow position: | chr6:12998191-12998522 (view UCSC Genome Browser custom track) | 
| Alignm length: | 333 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 329 | 
| Conread position: | 182-508 | 
| Cow position: | chr6:10605309-10605646 (view UCSC Genome Browser custom track) | 
| Alignm length: | 339 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 47, 38 | 
| Conread position: | 182-508 | 
| Cow position: | chr6:12550893-12551223 (view UCSC Genome Browser custom track) | 
| Alignm length: | 334 | 
| Alignm identity: | 251 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 179 | 
| Conread position: | 182-510 | 
| Cow position: | chr6:12629643-12629980 (view UCSC Genome Browser custom track) | 
| Alignm length: | 345 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 120, 6 | 
| Conread position: | 182-510 | 
| Cow position: | chr6:16706635-16706958 (view UCSC Genome Browser custom track) | 
| Alignm length: | 332 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 142 | 
| Conread position: | 182-510 | 
| Cow position: | chr6:28180340-28180013 (view UCSC Genome Browser custom track) | 
| Alignm length: | 334 | 
| Alignm identity: | 231 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 33, 139 | 
| Conread position: | 182-510 | 
| Cow position: | chr6:49398992-49398659 (view UCSC Genome Browser custom track) | 
| Alignm length: | 335 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 104, 301 | 
| Conread position: | 182-510 | 
| Cow position: | chr6:67187322-67187639 (view UCSC Genome Browser custom track) | 
| Alignm length: | 330 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 115 | 
| Conread position: | 182-511 | 
| Cow position: | chr6:2090033-2090369 (view UCSC Genome Browser custom track) | 
| Alignm length: | 337 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-511 | 
| Cow position: | chr6:2110489-2110156 (view UCSC Genome Browser custom track) | 
| Alignm length: | 336 | 
| Alignm identity: | 231 | 
| Alignm E-value: | 5.04467e-44 | 
| Alignm gaps (pig, cow): | 252, 119 | 
| Conread position: | 182-511 | 
| Cow position: | chr6:2185727-2185392 (view UCSC Genome Browser custom track) | 
| Alignm length: | 337 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 125, 179 | 
| Conread position: | 182-511 | 
| Cow position: | chr6:7466876-7466540 (view UCSC Genome Browser custom track) | 
| Alignm length: | 338 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 32 | 
| Conread position: | 182-511 | 
| Cow position: | chr6:9733206-9732887 (view UCSC Genome Browser custom track) | 
| Alignm length: | 335 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 108 | 
| Conread position: | 182-511 | 
| Cow position: | chr6:9737489-9737159 (view UCSC Genome Browser custom track) | 
| Alignm length: | 335 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 92, 181 | 
| Conread position: | 182-511 | 
| Cow position: | chr6:20451731-20452064 (view UCSC Genome Browser custom track) | 
| Alignm length: | 339 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 29, 57 | 
| Conread position: | 182-511 | 
| Cow position: | chr6:21857511-21857846 (view UCSC Genome Browser custom track) | 
| Alignm length: | 338 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 18, 32 | 
| Conread position: | 182-511 | 
| Cow position: | chr6:25207211-25207547 (view UCSC Genome Browser custom track) | 
| Alignm length: | 337 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-511 | 
| Cow position: | chr6:27526230-27525895 (view UCSC Genome Browser custom track) | 
| Alignm length: | 338 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 92 | 
| Conread position: | 182-511 | 
| Cow position: | chr6:28322546-28322236 (view UCSC Genome Browser custom track) | 
| Alignm length: | 333 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 125, 20 | 
| Conread position: | 182-511 | 
| Cow position: | chr6:35872960-35872628 (view UCSC Genome Browser custom track) | 
| Alignm length: | 339 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 125, 55 | 
| Conread position: | 182-511 | 
| Cow position: | chr6:36532050-36532385 (view UCSC Genome Browser custom track) | 
| Alignm length: | 339 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 43, 38 | 
| Conread position: | 182-511 | 
| Cow position: | chr6:38994016-38993680 (view UCSC Genome Browser custom track) | 
| Alignm length: | 339 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 5.00264e-43 | 
| Alignm gaps (pig, cow): | 125, 283 | 
| Conread position: | 182-511 | 
| Cow position: | chr6:41193122-41193458 (view UCSC Genome Browser custom track) | 
| Alignm length: | 341 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 3.99931e-42 | 
| Alignm gaps (pig, cow): | 73, 222 | 
| Conread position: | 182-511 | 
| Cow position: | chr6:47383627-47383963 (view UCSC Genome Browser custom track) | 
| Alignm length: | 339 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 125, 89 | 
| Conread position: | 182-511 | 
| Cow position: | chr6:51718330-51718666 (view UCSC Genome Browser custom track) | 
| Alignm length: | 338 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 319 | 
| Conread position: | 182-511 | 
| Cow position: | chr6:51877530-51877865 (view UCSC Genome Browser custom track) | 
| Alignm length: | 343 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 7e-26 | 
| Alignm gaps (pig, cow): | 80, 49 | 
| Conread position: | 182-511 | 
| Cow position: | chr6:55538498-55538166 (view UCSC Genome Browser custom track) | 
| Alignm length: | 339 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 170 | 
| Conread position: | 182-511 | 
| Cow position: | chr6:58940597-58940261 (view UCSC Genome Browser custom track) | 
| Alignm length: | 338 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 32 | 
| Conread position: | 182-511 | 
| Cow position: | chr6:60877070-60877406 (view UCSC Genome Browser custom track) | 
| Alignm length: | 338 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 25, 45 | 
| Conread position: | 182-511 | 
| Cow position: | chr6:64720922-64721249 (view UCSC Genome Browser custom track) | 
| Alignm length: | 337 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 123, 36 | 
| Conread position: | 182-511 | 
| Cow position: | chr6:66199415-66199746 (view UCSC Genome Browser custom track) | 
| Alignm length: | 335 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 83, 108 | 
| Conread position: | 182-511 | 
| Cow position: | chr6:67430264-67429928 (view UCSC Genome Browser custom track) | 
| Alignm length: | 337 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-512 | 
| Cow position: | chr6:2607239-2607572 (view UCSC Genome Browser custom track) | 
| Alignm length: | 336 | 
| Alignm identity: | 262 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 123, 135 | 
| Conread position: | 182-512 | 
| Cow position: | chr6:6343047-6343385 (view UCSC Genome Browser custom track) | 
| Alignm length: | 341 | 
| Alignm identity: | 254 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 119 | 
| Conread position: | 182-512 | 
| Cow position: | chr6:14696746-14696413 (view UCSC Genome Browser custom track) | 
| Alignm length: | 337 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 112, 36 | 
| Conread position: | 182-512 | 
| Cow position: | chr6:17865165-17865497 (view UCSC Genome Browser custom track) | 
| Alignm length: | 335 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 123, 158 | 
| Conread position: | 182-512 | 
| Cow position: | chr6:32125692-32126021 (view UCSC Genome Browser custom track) | 
| Alignm length: | 335 | 
| Alignm identity: | 247 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 300 | 
| Conread position: | 182-512 | 
| Cow position: | chr6:33302036-33302368 (view UCSC Genome Browser custom track) | 
| Alignm length: | 337 | 
| Alignm identity: | 251 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 116, 255 | 
| Conread position: | 182-512 | 
| Cow position: | chr6:46161899-46161562 (view UCSC Genome Browser custom track) | 
| Alignm length: | 339 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 326 | 
| Conread position: | 182-512 | 
| Cow position: | chr6:48169570-48169903 (view UCSC Genome Browser custom track) | 
| Alignm length: | 336 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 240 | 
| Conread position: | 182-512 | 
| Cow position: | chr6:51674535-51674870 (view UCSC Genome Browser custom track) | 
| Alignm length: | 344 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 5.04467e-44 | 
| Alignm gaps (pig, cow): | 25, 34 | 
| Conread position: | 182-512 | 
| Cow position: | chr6:61575217-61575566 (view UCSC Genome Browser custom track) | 
| Alignm length: | 351 | 
| Alignm identity: | 251 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 27, 209 | 
| Conread position: | 182-512 | 
| Cow position: | chr6:62925375-62925040 (view UCSC Genome Browser custom track) | 
| Alignm length: | 345 | 
| Alignm identity: | 259 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 92 | 
| Conread position: | 182-512 | 
| Cow position: | chr6:67544667-67544339 (view UCSC Genome Browser custom track) | 
| Alignm length: | 334 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 123, 255 | 
| Conread position: | 182-513 | 
| Cow position: | chr6:59507966-59508320 (view UCSC Genome Browser custom track) | 
| Alignm length: | 357 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 25, 184 | 
| Conread position: | 182-514 | 
| Cow position: | chr6:45690984-45690630 (view UCSC Genome Browser custom track) | 
| Alignm length: | 358 | 
| Alignm identity: | 249 | 
| Alignm E-value: | 8e-38 | 
| Alignm gaps (pig, cow): | 136, 127 | 
| Conread position: | 182-515 | 
| Cow position: | chr6:6642960-6642640 (view UCSC Genome Browser custom track) | 
| Alignm length: | 337 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 121, 44 | 
| Conread position: | 182-515 | 
| Cow position: | chr6:12623096-12623430 (view UCSC Genome Browser custom track) | 
| Alignm length: | 341 | 
| Alignm identity: | 249 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 195 | 
| Conread position: | 182-515 | 
| Cow position: | chr6:29210127-29210457 (view UCSC Genome Browser custom track) | 
| Alignm length: | 337 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 168 | 
| Conread position: | 182-515 | 
| Cow position: | chr6:38770930-38771246 (view UCSC Genome Browser custom track) | 
| Alignm length: | 341 | 
| Alignm identity: | 246 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 154, 63 | 
| Conread position: | 182-515 | 
| Cow position: | chr6:56842785-56843115 (view UCSC Genome Browser custom track) | 
| Alignm length: | 337 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 126, 179 | 
| Conread position: | 182-517 | 
| Cow position: | chr6:8753683-8753343 (view UCSC Genome Browser custom track) | 
| Alignm length: | 344 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 53 | 
| Conread position: | 182-518 | 
| Cow position: | chr6:1784140-1783814 (view UCSC Genome Browser custom track) | 
| Alignm length: | 339 | 
| Alignm identity: | 256 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 246, 125 | 
| Conread position: | 182-518 | 
| Cow position: | chr6:11192825-11192504 (view UCSC Genome Browser custom track) | 
| Alignm length: | 339 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 5.00264e-43 | 
| Alignm gaps (pig, cow): | 125, 45 | 
| Conread position: | 182-518 | 
| Cow position: | chr6:16699896-16700228 (view UCSC Genome Browser custom track) | 
| Alignm length: | 344 | 
| Alignm identity: | 247 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 136, 48 | 
| Conread position: | 182-518 | 
| Cow position: | chr6:18961895-18961553 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 125, 107 | 
| Conread position: | 182-518 | 
| Cow position: | chr6:24031000-24031342 (view UCSC Genome Browser custom track) | 
| Alignm length: | 344 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 301 | 
| Conread position: | 182-518 | 
| Cow position: | chr6:36470942-36470603 (view UCSC Genome Browser custom track) | 
| Alignm length: | 346 | 
| Alignm identity: | 251 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 43, 191 | 
| Conread position: | 182-518 | 
| Cow position: | chr6:36652049-36652382 (view UCSC Genome Browser custom track) | 
| Alignm length: | 346 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 5e-33 | 
| Alignm gaps (pig, cow): | 25, 117 | 
| Conread position: | 182-518 | 
| Cow position: | chr6:36928277-36928618 (view UCSC Genome Browser custom track) | 
| Alignm length: | 345 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 37, 144 | 
| Conread position: | 182-518 | 
| Cow position: | chr6:46465453-46465786 (view UCSC Genome Browser custom track) | 
| Alignm length: | 342 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 125, 272 | 
| Conread position: | 182-518 | 
| Cow position: | chr6:46666732-46667075 (view UCSC Genome Browser custom track) | 
| Alignm length: | 350 | 
| Alignm identity: | 260 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 73 | 
| Conread position: | 182-518 | 
| Cow position: | chr6:53178264-53178602 (view UCSC Genome Browser custom track) | 
| Alignm length: | 343 | 
| Alignm identity: | 256 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 92, 180 | 
| Conread position: | 182-518 | 
| Cow position: | chr6:53933223-53932884 (view UCSC Genome Browser custom track) | 
| Alignm length: | 350 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 6e-36 | 
| Alignm gaps (pig, cow): | 102, 44 | 
| Conread position: | 182-518 | 
| Cow position: | chr6:66363620-66363280 (view UCSC Genome Browser custom track) | 
| Alignm length: | 343 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 41, 285 | 
| Conread position: | 182-518 | 
| Cow position: | chr6:67214367-67214708 (view UCSC Genome Browser custom track) | 
| Alignm length: | 344 | 
| Alignm identity: | 251 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 179 | 
| Conread position: | 182-519 | 
| Cow position: | chr6:16737646-16737984 (view UCSC Genome Browser custom track) | 
| Alignm length: | 340 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 122, 179 | 
| Conread position: | 182-519 | 
| Cow position: | chr6:17557000-17557346 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 123, 179 | 
| Conread position: | 182-519 | 
| Cow position: | chr6:25407779-25407426 (view UCSC Genome Browser custom track) | 
| Alignm length: | 356 | 
| Alignm identity: | 251 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 120, 44 | 
| Conread position: | 182-519 | 
| Cow position: | chr6:32916294-32915960 (view UCSC Genome Browser custom track) | 
| Alignm length: | 341 | 
| Alignm identity: | 256 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 124, 45 | 
| Conread position: | 182-519 | 
| Cow position: | chr6:42931471-42931141 (view UCSC Genome Browser custom track) | 
| Alignm length: | 344 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 4e-31 | 
| Alignm gaps (pig, cow): | 200, 53 | 
| Conread position: | 182-519 | 
| Cow position: | chr6:53345421-53345761 (view UCSC Genome Browser custom track) | 
| Alignm length: | 342 | 
| Alignm identity: | 251 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 312 | 
| Conread position: | 182-519 | 
| Cow position: | chr6:61631988-61631644 (view UCSC Genome Browser custom track) | 
| Alignm length: | 349 | 
| Alignm identity: | 257 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 204, 136 | 
| Conread position: | 182-520 | 
| Cow position: | chr6:706769-707114 (view UCSC Genome Browser custom track) | 
| Alignm length: | 346 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-520 | 
| Cow position: | chr6:1817240-1816899 (view UCSC Genome Browser custom track) | 
| Alignm length: | 345 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 179 | 
| Conread position: | 182-520 | 
| Cow position: | chr6:2875261-2874925 (view UCSC Genome Browser custom track) | 
| Alignm length: | 346 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 9e-39 | 
| Alignm gaps (pig, cow): | 125, 35 | 
| Conread position: | 182-520 | 
| Cow position: | chr6:5944676-5944331 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 290 | 
| Conread position: | 182-520 | 
| Cow position: | chr6:6181951-6181606 (view UCSC Genome Browser custom track) | 
| Alignm length: | 346 | 
| Alignm identity: | 246 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 121, 0 | 
| Conread position: | 182-520 | 
| Cow position: | chr6:11288693-11288347 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 125, 199 | 
| Conread position: | 182-520 | 
| Cow position: | chr6:11721153-11720808 (view UCSC Genome Browser custom track) | 
| Alignm length: | 346 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-520 | 
| Cow position: | chr6:16593719-16594047 (view UCSC Genome Browser custom track) | 
| Alignm length: | 345 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 252, 106 | 
| Conread position: | 182-520 | 
| Cow position: | chr6:18418827-18418482 (view UCSC Genome Browser custom track) | 
| Alignm length: | 346 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-520 | 
| Cow position: | chr6:20552478-20552134 (view UCSC Genome Browser custom track) | 
| Alignm length: | 346 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 318 | 
| Conread position: | 182-520 | 
| Cow position: | chr6:28112063-28111722 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 3.99931e-42 | 
| Alignm gaps (pig, cow): | 54, 60 | 
| Conread position: | 182-520 | 
| Cow position: | chr6:31192702-31192356 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 5.00264e-43 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-520 | 
| Cow position: | chr6:40320320-40320652 (view UCSC Genome Browser custom track) | 
| Alignm length: | 346 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 125, 90 | 
| Conread position: | 182-520 | 
| Cow position: | chr6:40549926-40549581 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 18, 32 | 
| Conread position: | 182-520 | 
| Cow position: | chr6:40814136-40814483 (view UCSC Genome Browser custom track) | 
| Alignm length: | 349 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 46, 321 | 
| Conread position: | 182-520 | 
| Cow position: | chr6:43789595-43789255 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 5.04467e-44 | 
| Alignm gaps (pig, cow): | 125, 79 | 
| Conread position: | 182-520 | 
| Cow position: | chr6:44578769-44578430 (view UCSC Genome Browser custom track) | 
| Alignm length: | 343 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 173 | 
| Conread position: | 182-520 | 
| Cow position: | chr6:48872581-48872243 (view UCSC Genome Browser custom track) | 
| Alignm length: | 342 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 120, 254 | 
| Conread position: | 182-520 | 
| Cow position: | chr6:49706973-49706641 (view UCSC Genome Browser custom track) | 
| Alignm length: | 341 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 125, 247 | 
| Conread position: | 182-520 | 
| Cow position: | chr6:51733856-51734196 (view UCSC Genome Browser custom track) | 
| Alignm length: | 343 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 138 | 
| Conread position: | 182-520 | 
| Cow position: | chr6:55594019-55594358 (view UCSC Genome Browser custom track) | 
| Alignm length: | 343 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 26, 34 | 
| Conread position: | 182-520 | 
| Cow position: | chr6:55610613-55610271 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 25, 173 | 
| Conread position: | 182-520 | 
| Cow position: | chr6:58031748-58032090 (view UCSC Genome Browser custom track) | 
| Alignm length: | 346 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 25, 32 | 
| Conread position: | 182-520 | 
| Cow position: | chr6:58747836-58748180 (view UCSC Genome Browser custom track) | 
| Alignm length: | 346 | 
| Alignm identity: | 249 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 111 | 
| Conread position: | 182-520 | 
| Cow position: | chr6:65910100-65910439 (view UCSC Genome Browser custom track) | 
| Alignm length: | 343 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 245 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:327588-327235 (view UCSC Genome Browser custom track) | 
| Alignm length: | 356 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 18, 32 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:444153-443807 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:757997-758344 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 23, 0 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:1797400-1797746 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 5.04467e-44 | 
| Alignm gaps (pig, cow): | 18, 32 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:1910943-1911289 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:2196459-2196809 (view UCSC Genome Browser custom track) | 
| Alignm length: | 351 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:2389902-2389557 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 45, 35 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:2867685-2867339 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 231 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:2898537-2898883 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:3095331-3094985 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 247 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 34 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:3152987-3153334 (view UCSC Genome Browser custom track) | 
| Alignm length: | 349 | 
| Alignm identity: | 246 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 32 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:3157601-3157255 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:3719609-3719956 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 122, 0 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:5367060-5366714 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 18, 34 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:5751607-5751951 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 5.04467e-44 | 
| Alignm gaps (pig, cow): | 125, 187 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:6557646-6557992 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:7137567-7137222 (view UCSC Genome Browser custom track) | 
| Alignm length: | 349 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 32 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:7449270-7449616 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 45, 35 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:8194915-8195263 (view UCSC Genome Browser custom track) | 
| Alignm length: | 351 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 18, 34 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:9226293-9226637 (view UCSC Genome Browser custom track) | 
| Alignm length: | 346 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 247 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:9235287-9235633 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 18, 32 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:9321055-9321405 (view UCSC Genome Browser custom track) | 
| Alignm length: | 351 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 9e-39 | 
| Alignm gaps (pig, cow): | 126, 0 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:9322765-9323128 (view UCSC Genome Browser custom track) | 
| Alignm length: | 366 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 9e-39 | 
| Alignm gaps (pig, cow): | 125, 252 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:9741940-9742286 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:9751426-9751079 (view UCSC Genome Browser custom track) | 
| Alignm length: | 354 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 8e-38 | 
| Alignm gaps (pig, cow): | 42, 283 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:10013572-10013918 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:10865715-10866061 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:11020433-11020779 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 32 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:11034482-11034136 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 18, 32 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:11402095-11402440 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 32 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:11453092-11452746 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 32 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:11869162-11868816 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 336 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:12947727-12947383 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 32 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:12972171-12972517 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:13489169-13489517 (view UCSC Genome Browser custom track) | 
| Alignm length: | 349 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:13494318-13493970 (view UCSC Genome Browser custom track) | 
| Alignm length: | 349 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 0 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:13531439-13531785 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:13945638-13945984 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:14198421-14198765 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 151 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:14225568-14225222 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:16049521-16049182 (view UCSC Genome Browser custom track) | 
| Alignm length: | 346 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 18, 34 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:16765767-16765430 (view UCSC Genome Browser custom track) | 
| Alignm length: | 343 | 
| Alignm identity: | 247 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 249 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:17935401-17935055 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:18503039-18502693 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:18649139-18648793 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:18803284-18802939 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 249 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 225 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:19515625-19515971 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:19719345-19719695 (view UCSC Genome Browser custom track) | 
| Alignm length: | 352 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 18, 32 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:19819219-19819565 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:20174157-20174503 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:20268304-20268633 (view UCSC Genome Browser custom track) | 
| Alignm length: | 343 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 125, 21 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:20581004-20580658 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:21164078-21164424 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 5.04467e-44 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:21712481-21712827 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 120, 330 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:21719153-21718809 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 35 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:22043235-22042892 (view UCSC Genome Browser custom track) | 
| Alignm length: | 345 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 250, 120 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:22627953-22627607 (view UCSC Genome Browser custom track) | 
| Alignm length: | 349 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 18, 32 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:22736931-22736589 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 18, 32 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:23426818-23427164 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 18, 32 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:24237578-24237232 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:24262892-24263238 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 3.99931e-42 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:24757723-24757383 (view UCSC Genome Browser custom track) | 
| Alignm length: | 343 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 5.04467e-44 | 
| Alignm gaps (pig, cow): | 125, 236 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:25095649-25095995 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:25217700-25217372 (view UCSC Genome Browser custom track) | 
| Alignm length: | 342 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 6e-36 | 
| Alignm gaps (pig, cow): | 18, 32 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:25363326-25363672 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:25376033-25376380 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:25410231-25410577 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:25822373-25822038 (view UCSC Genome Browser custom track) | 
| Alignm length: | 344 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 125, 58 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:26830302-26830643 (view UCSC Genome Browser custom track) | 
| Alignm length: | 345 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 18, 32 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:27173616-27173964 (view UCSC Genome Browser custom track) | 
| Alignm length: | 349 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:28000621-28000277 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 3.99931e-42 | 
| Alignm gaps (pig, cow): | 125, 14 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:28065762-28066113 (view UCSC Genome Browser custom track) | 
| Alignm length: | 352 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:28184546-28184200 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 5.00264e-43 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:28294050-28293704 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:28700790-28700444 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 231 | 
| Alignm E-value: | 8e-38 | 
| Alignm gaps (pig, cow): | 18, 32 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:31081675-31082008 (view UCSC Genome Browser custom track) | 
| Alignm length: | 343 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 35 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:31520213-31520559 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 18, 34 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:31548804-31548460 (view UCSC Genome Browser custom track) | 
| Alignm length: | 345 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:31568073-31567728 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 48, 7 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:33489459-33489114 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 5.04467e-44 | 
| Alignm gaps (pig, cow): | 128, 85 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:33863381-33863727 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:34016948-34016602 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 246 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 32 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:36258729-36259075 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:36901785-36902131 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:37389084-37389430 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 330 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:37736695-37737041 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:38061387-38061732 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 174 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:38917264-38916918 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:39088397-39088739 (view UCSC Genome Browser custom track) | 
| Alignm length: | 343 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:40251029-40250684 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 197 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:40278827-40279173 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 45, 35 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:40449892-40449546 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 3.99931e-42 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:40912775-40912438 (view UCSC Genome Browser custom track) | 
| Alignm length: | 344 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 18, 32 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:42518595-42518942 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:43049786-43050130 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 185 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:43921411-43921750 (view UCSC Genome Browser custom track) | 
| Alignm length: | 344 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 255 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:43955327-43955673 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 125, 319 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:43999384-43999038 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 32 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:44146176-44145827 (view UCSC Genome Browser custom track) | 
| Alignm length: | 352 | 
| Alignm identity: | 246 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 18, 34 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:45591920-45592270 (view UCSC Genome Browser custom track) | 
| Alignm length: | 351 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:45694636-45694982 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:45723349-45722996 (view UCSC Genome Browser custom track) | 
| Alignm length: | 354 | 
| Alignm identity: | 246 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:45751708-45752054 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:45765346-45765000 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:45938054-45938400 (view UCSC Genome Browser custom track) | 
| Alignm length: | 350 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 32 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:45976274-45976620 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:46224910-46224566 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 5.04467e-44 | 
| Alignm gaps (pig, cow): | 18, 34 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:46607734-46607388 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:46633888-46634223 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 102, 136 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:46948587-46948933 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 18, 32 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:47674748-47675093 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 197 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:48290572-48290913 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 246 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 45, 35 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:49626980-49627322 (view UCSC Genome Browser custom track) | 
| Alignm length: | 344 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 126, 40 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:49684941-49684595 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 201 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:49794733-49795079 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:49963388-49963046 (view UCSC Genome Browser custom track) | 
| Alignm length: | 345 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 45, 35 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:51869712-51870055 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 251 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 32 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:52424646-52424992 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:52482120-52482466 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:53052354-53052700 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:53271429-53271775 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 32 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:53542694-53542349 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 32 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:53740066-53740413 (view UCSC Genome Browser custom track) | 
| Alignm length: | 349 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 5.04467e-44 | 
| Alignm gaps (pig, cow): | 125, 179 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:54647900-54647555 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 254 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 85, 248 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:55040592-55040245 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:55239465-55239812 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:55361731-55362075 (view UCSC Genome Browser custom track) | 
| Alignm length: | 345 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:55388512-55388857 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 32 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:56080142-56079798 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 125, 239 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:56441305-56440959 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:56888187-56888524 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 9e-39 | 
| Alignm gaps (pig, cow): | 125, 183 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:57308996-57309342 (view UCSC Genome Browser custom track) | 
| Alignm length: | 349 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 32 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:59052193-59052539 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 120, 0 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:59834853-59835199 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:60066098-60066444 (view UCSC Genome Browser custom track) | 
| Alignm length: | 349 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 18, 32 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:61257638-61257981 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 125, 35 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:62038170-62038512 (view UCSC Genome Browser custom track) | 
| Alignm length: | 346 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 32 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:62331292-62330949 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 125, 185 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:62665550-62665897 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 23, 0 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:63177895-63178241 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:64337997-64337651 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:66566081-66566426 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 179 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:67403593-67403247 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:67554005-67554352 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:67818575-67818229 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 246 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 32 | 
| Conread position: | 182-521 | 
| Cow position: | chr6:68340174-68339829 (view UCSC Genome Browser custom track) | 
| Alignm length: | 346 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-522 | 
| Cow position: | chr6:10332483-10332125 (view UCSC Genome Browser custom track) | 
| Alignm length: | 362 | 
| Alignm identity: | 273 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 52, 300 | 
| Conread position: | 182-522 | 
| Cow position: | chr6:65874329-65873985 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 32 | 
| Conread position: | 182-523 | 
| Cow position: | chr6:42565310-42565655 (view UCSC Genome Browser custom track) | 
| Alignm length: | 350 | 
| Alignm identity: | 259 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 25, 206 | 
| Conread position: | 182-525 | 
| Cow position: | chr6:27152450-27152800 (view UCSC Genome Browser custom track) | 
| Alignm length: | 351 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 3.99931e-42 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 182-529 | 
| Cow position: | chr6:13366924-13367263 (view UCSC Genome Browser custom track) | 
| Alignm length: | 353 | 
| Alignm identity: | 246 | 
| Alignm E-value: | 5.00264e-43 | 
| Alignm gaps (pig, cow): | 76, 14 | 
| Conread position: | 182-530 | 
| Cow position: | chr6:54357756-54357400 (view UCSC Genome Browser custom track) | 
| Alignm length: | 362 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 5e-34 | 
| Alignm gaps (pig, cow): | 16, 185 | 
| Conread position: | 182-531 | 
| Cow position: | chr6:47026102-47026459 (view UCSC Genome Browser custom track) | 
| Alignm length: | 368 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 45, 81 | 
| Conread position: | 182-537 | 
| Cow position: | chr6:38872753-38872386 (view UCSC Genome Browser custom track) | 
| Alignm length: | 370 | 
| Alignm identity: | 260 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 56 | 
| Conread position: | 182-539 | 
| Cow position: | chr6:28977424-28977051 (view UCSC Genome Browser custom track) | 
| Alignm length: | 384 | 
| Alignm identity: | 261 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 22, 286 | 
| Conread position: | 182-550 | 
| Cow position: | chr6:64431572-64431939 (view UCSC Genome Browser custom track) | 
| Alignm length: | 374 | 
| Alignm identity: | 265 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 320, 53 | 
| Conread position: | 182-553 | 
| Cow position: | chr6:10695485-10695874 (view UCSC Genome Browser custom track) | 
| Alignm length: | 394 | 
| Alignm identity: | 274 | 
| Alignm E-value: | 5.04467e-44 | 
| Alignm gaps (pig, cow): | 125, 71 | 
| Conread position: | 182-558 | 
| Cow position: | chr6:40031818-40032201 (view UCSC Genome Browser custom track) | 
| Alignm length: | 390 | 
| Alignm identity: | 295 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 65, 187 | 
| Conread position: | 182-562 | 
| Cow position: | chr6:5958390-5958011 (view UCSC Genome Browser custom track) | 
| Alignm length: | 390 | 
| Alignm identity: | 295 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 108 | 
| Conread position: | 182-562 | 
| Cow position: | chr6:16410823-16411206 (view UCSC Genome Browser custom track) | 
| Alignm length: | 393 | 
| Alignm identity: | 293 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 123, 44 | 
| Conread position: | 182-566 | 
| Cow position: | chr6:47339738-47339339 (view UCSC Genome Browser custom track) | 
| Alignm length: | 406 | 
| Alignm identity: | 279 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 31, 271 | 
| Conread position: | 182-568 | 
| Cow position: | chr6:5095925-5095526 (view UCSC Genome Browser custom track) | 
| Alignm length: | 409 | 
| Alignm identity: | 303 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 52 | 
| Conread position: | 182-568 | 
| Cow position: | chr6:35103697-35103309 (view UCSC Genome Browser custom track) | 
| Alignm length: | 402 | 
| Alignm identity: | 284 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 123, 18 | 
| Conread position: | 182-568 | 
| Cow position: | chr6:35181621-35181237 (view UCSC Genome Browser custom track) | 
| Alignm length: | 397 | 
| Alignm identity: | 291 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 121, 51 | 
| Conread position: | 182-568 | 
| Cow position: | chr6:48567720-48567327 (view UCSC Genome Browser custom track) | 
| Alignm length: | 400 | 
| Alignm identity: | 277 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 64, 265 | 
| Conread position: | 182-584 | 
| Cow position: | chr6:9375745-9375342 (view UCSC Genome Browser custom track) | 
| Alignm length: | 414 | 
| Alignm identity: | 296 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 33 | 
| Conread position: | 182-585 | 
| Cow position: | chr6:606888-607295 (view UCSC Genome Browser custom track) | 
| Alignm length: | 413 | 
| Alignm identity: | 288 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 33 | 
| Conread position: | 182-589 | 
| Cow position: | chr6:47540150-47540570 (view UCSC Genome Browser custom track) | 
| Alignm length: | 425 | 
| Alignm identity: | 320 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 78, 374 | 
| Conread position: | 182-591 | 
| Cow position: | chr6:1770569-1770158 (view UCSC Genome Browser custom track) | 
| Alignm length: | 422 | 
| Alignm identity: | 307 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 67 | 
| Conread position: | 182-591 | 
| Cow position: | chr6:66304213-66303800 (view UCSC Genome Browser custom track) | 
| Alignm length: | 426 | 
| Alignm identity: | 300 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 117, 14 | 
| Conread position: | 182-611 | 
| Cow position: | chr6:39358710-39358284 (view UCSC Genome Browser custom track) | 
| Alignm length: | 441 | 
| Alignm identity: | 308 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 69 | 
| Conread position: | 182-613 | 
| Cow position: | chr6:17414828-17414384 (view UCSC Genome Browser custom track) | 
| Alignm length: | 449 | 
| Alignm identity: | 304 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 239 | 
| Conread position: | 182-614 | 
| Cow position: | chr6:21004281-21004740 (view UCSC Genome Browser custom track) | 
| Alignm length: | 465 | 
| Alignm identity: | 330 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 124, 168 | 
| Conread position: | 182-630 | 
| Cow position: | chr6:14958717-14958261 (view UCSC Genome Browser custom track) | 
| Alignm length: | 465 | 
| Alignm identity: | 323 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 253, 82 | 
| Conread position: | 182-635 | 
| Cow position: | chr6:3979036-3978578 (view UCSC Genome Browser custom track) | 
| Alignm length: | 473 | 
| Alignm identity: | 334 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 158 | 
| Conread position: | 183-327 | 
| Cow position: | chr6:29239334-29239481 (view UCSC Genome Browser custom track) | 
| Alignm length: | 148 | 
| Alignm identity: | 111 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 121, 0 | 
| Conread position: | 183-348 | 
| Cow position: | chr6:1834770-1834934 (view UCSC Genome Browser custom track) | 
| Alignm length: | 168 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 124, 39 | 
| Conread position: | 183-351 | 
| Cow position: | chr6:44598275-44598105 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 17, 31 | 
| Conread position: | 183-367 | 
| Cow position: | chr6:28161182-28161368 (view UCSC Genome Browser custom track) | 
| Alignm length: | 187 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 124, 0 | 
| Conread position: | 183-406 | 
| Cow position: | chr6:21732485-21732258 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 31, 175 | 
| Conread position: | 183-411 | 
| Cow position: | chr6:33451597-33451822 (view UCSC Genome Browser custom track) | 
| Alignm length: | 232 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 5.00264e-43 | 
| Alignm gaps (pig, cow): | 85, 60 | 
| Conread position: | 183-415 | 
| Cow position: | chr6:56651892-56651660 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 3.99931e-42 | 
| Alignm gaps (pig, cow): | 124, 171 | 
| Conread position: | 183-433 | 
| Cow position: | chr6:5851798-5851552 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 125, 49 | 
| Conread position: | 183-433 | 
| Cow position: | chr6:14891206-14890954 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 124, 0 | 
| Conread position: | 183-433 | 
| Cow position: | chr6:37762018-37762267 (view UCSC Genome Browser custom track) | 
| Alignm length: | 254 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 5e-33 | 
| Alignm gaps (pig, cow): | 37, 24 | 
| Conread position: | 183-466 | 
| Cow position: | chr6:56501938-56502221 (view UCSC Genome Browser custom track) | 
| Alignm length: | 287 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 135, 96 | 
| Conread position: | 183-473 | 
| Cow position: | chr6:1866307-1866590 (view UCSC Genome Browser custom track) | 
| Alignm length: | 298 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 53, 130 | 
| Conread position: | 183-473 | 
| Cow position: | chr6:43039688-43039982 (view UCSC Genome Browser custom track) | 
| Alignm length: | 298 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 124, 186 | 
| Conread position: | 183-476 | 
| Cow position: | chr6:38797918-38798222 (view UCSC Genome Browser custom track) | 
| Alignm length: | 311 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 24, 14 | 
| Conread position: | 183-485 | 
| Cow position: | chr6:65863100-65863410 (view UCSC Genome Browser custom track) | 
| Alignm length: | 312 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 17, 31 | 
| Conread position: | 183-492 | 
| Cow position: | chr6:41835076-41835392 (view UCSC Genome Browser custom track) | 
| Alignm length: | 317 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 5.00264e-43 | 
| Alignm gaps (pig, cow): | 124, 0 | 
| Conread position: | 183-494 | 
| Cow position: | chr6:54886839-54886521 (view UCSC Genome Browser custom track) | 
| Alignm length: | 319 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 124, 0 | 
| Conread position: | 183-498 | 
| Cow position: | chr6:65862312-65862635 (view UCSC Genome Browser custom track) | 
| Alignm length: | 325 | 
| Alignm identity: | 246 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 129, 316 | 
| Conread position: | 183-506 | 
| Cow position: | chr6:47039435-47039127 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 8e-28 | 
| Alignm gaps (pig, cow): | 124, 55 | 
| Conread position: | 183-511 | 
| Cow position: | chr6:3575065-3575400 (view UCSC Genome Browser custom track) | 
| Alignm length: | 339 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 124, 241 | 
| Conread position: | 183-511 | 
| Cow position: | chr6:34842933-34842599 (view UCSC Genome Browser custom track) | 
| Alignm length: | 336 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 124, 317 | 
| Conread position: | 183-512 | 
| Cow position: | chr6:1887021-1886707 (view UCSC Genome Browser custom track) | 
| Alignm length: | 333 | 
| Alignm identity: | 246 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 124, 148 | 
| Conread position: | 183-512 | 
| Cow position: | chr6:6068062-6067734 (view UCSC Genome Browser custom track) | 
| Alignm length: | 344 | 
| Alignm identity: | 247 | 
| Alignm E-value: | 3.99931e-42 | 
| Alignm gaps (pig, cow): | 124, 265 | 
| Conread position: | 183-512 | 
| Cow position: | chr6:39093389-39093693 (view UCSC Genome Browser custom track) | 
| Alignm length: | 334 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 67, 30 | 
| Conread position: | 183-515 | 
| Cow position: | chr6:11638114-11637792 (view UCSC Genome Browser custom track) | 
| Alignm length: | 334 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 305, 139 | 
| Conread position: | 183-518 | 
| Cow position: | chr6:23695624-23695957 (view UCSC Genome Browser custom track) | 
| Alignm length: | 339 | 
| Alignm identity: | 258 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 122, 178 | 
| Conread position: | 183-518 | 
| Cow position: | chr6:32211000-32210665 (view UCSC Genome Browser custom track) | 
| Alignm length: | 342 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 68 | 
| Conread position: | 183-518 | 
| Cow position: | chr6:44098714-44099050 (view UCSC Genome Browser custom track) | 
| Alignm length: | 341 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 124, 138 | 
| Conread position: | 183-518 | 
| Cow position: | chr6:50120160-50119823 (view UCSC Genome Browser custom track) | 
| Alignm length: | 344 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 58, 147 | 
| Conread position: | 183-518 | 
| Cow position: | chr6:52478816-52478451 (view UCSC Genome Browser custom track) | 
| Alignm length: | 367 | 
| Alignm identity: | 261 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 124, 338 | 
| Conread position: | 183-521 | 
| Cow position: | chr6:57521951-57522296 (view UCSC Genome Browser custom track) | 
| Alignm length: | 346 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 124, 0 | 
| Conread position: | 183-522 | 
| Cow position: | chr6:21312130-21311783 (view UCSC Genome Browser custom track) | 
| Alignm length: | 353 | 
| Alignm identity: | 265 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 20, 142 | 
| Conread position: | 183-531 | 
| Cow position: | chr6:60673174-60673519 (view UCSC Genome Browser custom track) | 
| Alignm length: | 354 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 124, 172 | 
| Conread position: | 183-592 | 
| Cow position: | chr6:51835029-51835442 (view UCSC Genome Browser custom track) | 
| Alignm length: | 423 | 
| Alignm identity: | 303 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 123, 56 | 
| Conread position: | 184-322 | 
| Cow position: | chr6:6100099-6099960 (view UCSC Genome Browser custom track) | 
| Alignm length: | 141 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 123, 21 | 
| Conread position: | 184-348 | 
| Cow position: | chr6:33855444-33855607 (view UCSC Genome Browser custom track) | 
| Alignm length: | 167 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 123, 139 | 
| Conread position: | 184-351 | 
| Cow position: | chr6:50571945-50572114 (view UCSC Genome Browser custom track) | 
| Alignm length: | 170 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 123, 0 | 
| Conread position: | 184-367 | 
| Cow position: | chr6:26916010-26916195 (view UCSC Genome Browser custom track) | 
| Alignm length: | 187 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 16, 30 | 
| Conread position: | 184-367 | 
| Cow position: | chr6:50755650-50755835 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 123, 0 | 
| Conread position: | 184-391 | 
| Cow position: | chr6:18955406-18955197 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 123, 186 | 
| Conread position: | 184-415 | 
| Cow position: | chr6:62015273-62015505 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 126, 59 | 
| Conread position: | 184-433 | 
| Cow position: | chr6:22507373-22507624 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 123, 196 | 
| Conread position: | 184-433 | 
| Cow position: | chr6:61051346-61051095 (view UCSC Genome Browser custom track) | 
| Alignm length: | 252 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 123, 0 | 
| Conread position: | 184-439 | 
| Cow position: | chr6:37487675-37487420 (view UCSC Genome Browser custom track) | 
| Alignm length: | 258 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 123, 55 | 
| Conread position: | 184-447 | 
| Cow position: | chr6:64097024-64096758 (view UCSC Genome Browser custom track) | 
| Alignm length: | 267 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 5.00264e-43 | 
| Alignm gaps (pig, cow): | 123, 0 | 
| Conread position: | 184-491 | 
| Cow position: | chr6:18049398-18049094 (view UCSC Genome Browser custom track) | 
| Alignm length: | 310 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 123, 177 | 
| Conread position: | 184-492 | 
| Cow position: | chr6:41823060-41822745 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 123, 0 | 
| Conread position: | 184-492 | 
| Cow position: | chr6:55720945-55721260 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 123, 0 | 
| Conread position: | 184-492 | 
| Cow position: | chr6:65041205-65040891 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 123, 281 | 
| Conread position: | 184-511 | 
| Cow position: | chr6:46681436-46681765 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 123, 143 | 
| Conread position: | 184-512 | 
| Cow position: | chr6:42267493-42267818 (view UCSC Genome Browser custom track) | 
| Alignm length: | 334 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 30, 141 | 
| Conread position: | 184-520 | 
| Cow position: | chr6:17111389-17111048 (view UCSC Genome Browser custom track) | 
| Alignm length: | 343 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 124, 144 | 
| Conread position: | 184-520 | 
| Cow position: | chr6:17122166-17122504 (view UCSC Genome Browser custom track) | 
| Alignm length: | 340 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 123, 144 | 
| Conread position: | 184-521 | 
| Cow position: | chr6:6060930-6060595 (view UCSC Genome Browser custom track) | 
| Alignm length: | 344 | 
| Alignm identity: | 256 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 126, 253 | 
| Conread position: | 184-521 | 
| Cow position: | chr6:6578147-6577803 (view UCSC Genome Browser custom track) | 
| Alignm length: | 345 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 123, 0 | 
| Conread position: | 184-521 | 
| Cow position: | chr6:27541338-27541682 (view UCSC Genome Browser custom track) | 
| Alignm length: | 345 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 123, 0 | 
| Conread position: | 184-521 | 
| Cow position: | chr6:41470694-41471038 (view UCSC Genome Browser custom track) | 
| Alignm length: | 345 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 123, 0 | 
| Conread position: | 184-524 | 
| Cow position: | chr6:28147883-28148219 (view UCSC Genome Browser custom track) | 
| Alignm length: | 350 | 
| Alignm identity: | 246 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 26, 33 | 
| Conread position: | 184-628 | 
| Cow position: | chr6:46292698-46292267 (view UCSC Genome Browser custom track) | 
| Alignm length: | 456 | 
| Alignm identity: | 308 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 118, 31 | 
| Conread position: | 185-323 | 
| Cow position: | chr6:62921614-62921474 (view UCSC Genome Browser custom track) | 
| Alignm length: | 141 | 
| Alignm identity: | 104 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 117, 0 | 
| Conread position: | 185-426 | 
| Cow position: | chr6:27815853-27815625 (view UCSC Genome Browser custom track) | 
| Alignm length: | 244 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 47, 30 | 
| Conread position: | 185-430 | 
| Cow position: | chr6:23987111-23986861 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 42, 181 | 
| Conread position: | 185-434 | 
| Cow position: | chr6:47441143-47440894 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 41, 58 | 
| Conread position: | 185-481 | 
| Cow position: | chr6:3561921-3562214 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 8e-27 | 
| Alignm gaps (pig, cow): | 30, 84 | 
| Conread position: | 185-481 | 
| Cow position: | chr6:12515779-12516076 (view UCSC Genome Browser custom track) | 
| Alignm length: | 310 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 38, 12 | 
| Conread position: | 185-482 | 
| Cow position: | chr6:6167025-6167324 (view UCSC Genome Browser custom track) | 
| Alignm length: | 306 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 25, 167 | 
| Conread position: | 185-496 | 
| Cow position: | chr6:49442734-49443027 (view UCSC Genome Browser custom track) | 
| Alignm length: | 315 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 122, 50 | 
| Conread position: | 185-510 | 
| Cow position: | chr6:18447885-18447555 (view UCSC Genome Browser custom track) | 
| Alignm length: | 334 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 56, 177 | 
| Conread position: | 185-511 | 
| Cow position: | chr6:28172848-28173180 (view UCSC Genome Browser custom track) | 
| Alignm length: | 334 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 122, 175 | 
| Conread position: | 185-512 | 
| Cow position: | chr6:9008972-9008654 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 122, 41 | 
| Conread position: | 185-512 | 
| Cow position: | chr6:18987848-18988170 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 122, 42 | 
| Conread position: | 185-512 | 
| Cow position: | chr6:37634419-37634741 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 120, 54 | 
| Conread position: | 185-512 | 
| Cow position: | chr6:46205646-46205972 (view UCSC Genome Browser custom track) | 
| Alignm length: | 336 | 
| Alignm identity: | 249 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 119, 176 | 
| Conread position: | 185-568 | 
| Cow position: | chr6:34075654-34076048 (view UCSC Genome Browser custom track) | 
| Alignm length: | 405 | 
| Alignm identity: | 286 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 46, 140 | 
| Conread position: | 185-585 | 
| Cow position: | chr6:49411051-49410663 (view UCSC Genome Browser custom track) | 
| Alignm length: | 410 | 
| Alignm identity: | 278 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 122, 94 | 
| Conread position: | 186-321 | 
| Cow position: | chr6:47988690-47988827 (view UCSC Genome Browser custom track) | 
| Alignm length: | 138 | 
| Alignm identity: | 104 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 121, 0 | 
| Conread position: | 186-354 | 
| Cow position: | chr6:51968792-51968963 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 9e-29 | 
| Alignm gaps (pig, cow): | 56, 14 | 
| Conread position: | 186-403 | 
| Cow position: | chr6:55763019-55763235 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 8e-38 | 
| Alignm gaps (pig, cow): | 116, 175 | 
| Conread position: | 186-431 | 
| Cow position: | chr6:32427880-32428121 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 23, 50 | 
| Conread position: | 186-433 | 
| Cow position: | chr6:16662566-16662804 (view UCSC Genome Browser custom track) | 
| Alignm length: | 251 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 37, 44 | 
| Conread position: | 186-433 | 
| Cow position: | chr6:65818452-65818206 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 116, 179 | 
| Conread position: | 186-434 | 
| Cow position: | chr6:222810-222551 (view UCSC Genome Browser custom track) | 
| Alignm length: | 261 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 5e-34 | 
| Alignm gaps (pig, cow): | 121, 52 | 
| Conread position: | 186-450 | 
| Cow position: | chr6:4389490-4389748 (view UCSC Genome Browser custom track) | 
| Alignm length: | 268 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 9e-39 | 
| Alignm gaps (pig, cow): | 231, 124 | 
| Conread position: | 186-476 | 
| Cow position: | chr6:59597286-59597583 (view UCSC Genome Browser custom track) | 
| Alignm length: | 298 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 121, 0 | 
| Conread position: | 186-481 | 
| Cow position: | chr6:2405148-2404853 (view UCSC Genome Browser custom track) | 
| Alignm length: | 302 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 24, 110 | 
| Conread position: | 186-482 | 
| Cow position: | chr6:4155916-4155609 (view UCSC Genome Browser custom track) | 
| Alignm length: | 311 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 5e-34 | 
| Alignm gaps (pig, cow): | 30, 124 | 
| Conread position: | 186-491 | 
| Cow position: | chr6:60931274-60930960 (view UCSC Genome Browser custom track) | 
| Alignm length: | 324 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 29, 78 | 
| Conread position: | 186-495 | 
| Cow position: | chr6:1914259-1914561 (view UCSC Genome Browser custom track) | 
| Alignm length: | 315 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 7e-26 | 
| Alignm gaps (pig, cow): | 121, 46 | 
| Conread position: | 186-508 | 
| Cow position: | chr6:7994851-7994512 (view UCSC Genome Browser custom track) | 
| Alignm length: | 344 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 5e-33 | 
| Alignm gaps (pig, cow): | 105, 14 | 
| Conread position: | 186-512 | 
| Cow position: | chr6:41824199-41823864 (view UCSC Genome Browser custom track) | 
| Alignm length: | 336 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 121, 0 | 
| Conread position: | 186-518 | 
| Cow position: | chr6:46570755-46571080 (view UCSC Genome Browser custom track) | 
| Alignm length: | 335 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 121, 53 | 
| Conread position: | 186-521 | 
| Cow position: | chr6:23567829-23567487 (view UCSC Genome Browser custom track) | 
| Alignm length: | 343 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 121, 0 | 
| Conread position: | 186-522 | 
| Cow position: | chr6:65870655-65870995 (view UCSC Genome Browser custom track) | 
| Alignm length: | 345 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 121, 27 | 
| Conread position: | 187-482 | 
| Cow position: | chr6:37390639-37390947 (view UCSC Genome Browser custom track) | 
| Alignm length: | 310 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 23, 173 | 
| Conread position: | 187-506 | 
| Cow position: | chr6:40358097-40357771 (view UCSC Genome Browser custom track) | 
| Alignm length: | 328 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 120, 314 | 
| Conread position: | 187-511 | 
| Cow position: | chr6:14133587-14133918 (view UCSC Genome Browser custom track) | 
| Alignm length: | 335 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 9e-39 | 
| Alignm gaps (pig, cow): | 13, 30 | 
| Conread position: | 187-512 | 
| Cow position: | chr6:27870385-27870734 (view UCSC Genome Browser custom track) | 
| Alignm length: | 352 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 5e-33 | 
| Alignm gaps (pig, cow): | 40, 70 | 
| Conread position: | 187-518 | 
| Cow position: | chr6:52248492-52248168 (view UCSC Genome Browser custom track) | 
| Alignm length: | 342 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 5e-34 | 
| Alignm gaps (pig, cow): | 140, 58 | 
| Conread position: | 187-521 | 
| Cow position: | chr6:65920979-65920627 (view UCSC Genome Browser custom track) | 
| Alignm length: | 353 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 9e-39 | 
| Alignm gaps (pig, cow): | 120, 0 | 
| Conread position: | 187-562 | 
| Cow position: | chr6:4864908-4864532 (view UCSC Genome Browser custom track) | 
| Alignm length: | 392 | 
| Alignm identity: | 280 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 120, 172 | 
| Conread position: | 188-425 | 
| Cow position: | chr6:1733886-1733644 (view UCSC Genome Browser custom track) | 
| Alignm length: | 243 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 21, 0 | 
| Conread position: | 188-427 | 
| Cow position: | chr6:54447803-54447558 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 40, 32 | 
| Conread position: | 188-460 | 
| Cow position: | chr6:6079280-6078993 (view UCSC Genome Browser custom track) | 
| Alignm length: | 288 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 22, 0 | 
| Conread position: | 188-482 | 
| Cow position: | chr6:31879737-31879445 (view UCSC Genome Browser custom track) | 
| Alignm length: | 302 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 39, 120 | 
| Conread position: | 188-520 | 
| Cow position: | chr6:6569751-6570087 (view UCSC Genome Browser custom track) | 
| Alignm length: | 337 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 7, 0 | 
| Conread position: | 189-404 | 
| Cow position: | chr6:119607-119827 (view UCSC Genome Browser custom track) | 
| Alignm length: | 226 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 19, 105 | 
| Conread position: | 190-386 | 
| Cow position: | chr6:22921019-22921218 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 5, 0 | 
| Conread position: | 191-333 | 
| Cow position: | chr6:15923591-15923447 (view UCSC Genome Browser custom track) | 
| Alignm length: | 145 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 114, 0 | 
| Conread position: | 191-431 | 
| Cow position: | chr6:39137264-39137510 (view UCSC Genome Browser custom track) | 
| Alignm length: | 252 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 116, 68 | 
| Conread position: | 191-433 | 
| Cow position: | chr6:32854626-32854392 (view UCSC Genome Browser custom track) | 
| Alignm length: | 244 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 4e-31 | 
| Alignm gaps (pig, cow): | 26, 103 | 
| Conread position: | 191-469 | 
| Cow position: | chr6:48107660-48107944 (view UCSC Genome Browser custom track) | 
| Alignm length: | 287 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 17, 106 | 
| Conread position: | 191-491 | 
| Cow position: | chr6:2012656-2012954 (view UCSC Genome Browser custom track) | 
| Alignm length: | 304 | 
| Alignm identity: | 231 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 49 | 
| Conread position: | 191-518 | 
| Cow position: | chr6:8562350-8562683 (view UCSC Genome Browser custom track) | 
| Alignm length: | 335 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 116, 292 | 
| Conread position: | 191-520 | 
| Cow position: | chr6:52431399-52431062 (view UCSC Genome Browser custom track) | 
| Alignm length: | 339 | 
| Alignm identity: | 251 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 71, 293 | 
| Conread position: | 191-520 | 
| Cow position: | chr6:55903867-55904203 (view UCSC Genome Browser custom track) | 
| Alignm length: | 338 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 116, 310 | 
| Conread position: | 192-351 | 
| Cow position: | chr6:34031021-34031179 (view UCSC Genome Browser custom track) | 
| Alignm length: | 162 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 115, 129 | 
| Conread position: | 194-407 | 
| Cow position: | chr6:1264246-1264460 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 6e-35 | 
| Alignm gaps (pig, cow): | 113, 167 | 
| Conread position: | 195-511 | 
| Cow position: | chr6:596098-595775 (view UCSC Genome Browser custom track) | 
| Alignm length: | 324 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 112, 0 | 
| Conread position: | 197-352 | 
| Cow position: | chr6:47150055-47150213 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 7e-26 | 
| Alignm gaps (pig, cow): | 65, 42 | 
| Conread position: | 197-480 | 
| Cow position: | chr6:52556829-52556549 (view UCSC Genome Browser custom track) | 
| Alignm length: | 287 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 7e-37 | 
| Alignm gaps (pig, cow): | 110, 20 | 
| Conread position: | 198-326 | 
| Cow position: | chr6:51398074-51398199 (view UCSC Genome Browser custom track) | 
| Alignm length: | 129 | 
| Alignm identity: | 101 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 18, 0 | 
| Conread position: | 198-482 | 
| Cow position: | chr6:8318524-8318237 (view UCSC Genome Browser custom track) | 
| Alignm length: | 290 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 19, 5 | 
| Conread position: | 200-323 | 
| Cow position: | chr6:44623131-44623006 (view UCSC Genome Browser custom track) | 
| Alignm length: | 126 | 
| Alignm identity: | 103 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 105, 0 | 
| Conread position: | 200-485 | 
| Cow position: | chr6:41162058-41161762 (view UCSC Genome Browser custom track) | 
| Alignm length: | 297 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 107, 0 | 
| Conread position: | 201-511 | 
| Cow position: | chr6:59576993-59577309 (view UCSC Genome Browser custom track) | 
| Alignm length: | 318 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 5e-34 | 
| Alignm gaps (pig, cow): | 106, 134 | 
| Conread position: | 202-363 | 
| Cow position: | chr6:33918494-33918329 (view UCSC Genome Browser custom track) | 
| Alignm length: | 167 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 17, 70 | 
| Conread position: | 202-433 | 
| Cow position: | chr6:36603812-36604042 (view UCSC Genome Browser custom track) | 
| Alignm length: | 237 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 25, 185 | 
| Conread position: | 202-482 | 
| Cow position: | chr6:6187907-6188179 (view UCSC Genome Browser custom track) | 
| Alignm length: | 286 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 6e-36 | 
| Alignm gaps (pig, cow): | 13, 91 | 
| Conread position: | 202-491 | 
| Cow position: | chr6:44372293-44372009 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 105, 83 | 
| Conread position: | 202-510 | 
| Cow position: | chr6:323665-323346 (view UCSC Genome Browser custom track) | 
| Alignm length: | 320 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 103, 0 | 
| Conread position: | 202-515 | 
| Cow position: | chr6:2546889-2547206 (view UCSC Genome Browser custom track) | 
| Alignm length: | 322 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 105, 46 | 
| Conread position: | 202-515 | 
| Cow position: | chr6:31535911-31535611 (view UCSC Genome Browser custom track) | 
| Alignm length: | 321 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 131, 41 | 
| Conread position: | 202-518 | 
| Cow position: | chr6:28476823-28477141 (view UCSC Genome Browser custom track) | 
| Alignm length: | 326 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 55, 16 | 
| Conread position: | 202-521 | 
| Cow position: | chr6:12927768-12928085 (view UCSC Genome Browser custom track) | 
| Alignm length: | 321 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 276, 107 | 
| Conread position: | 203-496 | 
| Cow position: | chr6:444973-445256 (view UCSC Genome Browser custom track) | 
| Alignm length: | 298 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 222, 108 | 
| Conread position: | 203-528 | 
| Cow position: | chr6:1406356-1406025 (view UCSC Genome Browser custom track) | 
| Alignm length: | 333 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 8e-38 | 
| Alignm gaps (pig, cow): | 104, 10 | 
| Conread position: | 204-491 | 
| Cow position: | chr6:2640474-2640179 (view UCSC Genome Browser custom track) | 
| Alignm length: | 299 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 103, 93 | 
| Conread position: | 204-512 | 
| Cow position: | chr6:14839377-14839067 (view UCSC Genome Browser custom track) | 
| Alignm length: | 317 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 101, 13 | 
| Conread position: | 204-518 | 
| Cow position: | chr6:24004193-24004506 (view UCSC Genome Browser custom track) | 
| Alignm length: | 325 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 13, 163 | 
| Conread position: | 205-334 | 
| Cow position: | chr6:30159491-30159622 (view UCSC Genome Browser custom track) | 
| Alignm length: | 132 | 
| Alignm identity: | 103 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 102, 0 | 
| Conread position: | 205-338 | 
| Cow position: | chr6:13717465-13717601 (view UCSC Genome Browser custom track) | 
| Alignm length: | 138 | 
| Alignm identity: | 107 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 12, 71 | 
| Conread position: | 205-338 | 
| Cow position: | chr6:42617271-42617407 (view UCSC Genome Browser custom track) | 
| Alignm length: | 137 | 
| Alignm identity: | 106 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 17, 0 | 
| Conread position: | 205-373 | 
| Cow position: | chr6:30076470-30076298 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 97, 0 | 
| Conread position: | 205-400 | 
| Cow position: | chr6:40497223-40497422 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 102, 31 | 
| Conread position: | 205-411 | 
| Cow position: | chr6:46529066-46529268 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 9e-29 | 
| Alignm gaps (pig, cow): | 102, 27 | 
| Conread position: | 205-433 | 
| Cow position: | chr6:50527306-50527533 (view UCSC Genome Browser custom track) | 
| Alignm length: | 232 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 12, 151 | 
| Conread position: | 205-439 | 
| Cow position: | chr6:61443452-61443219 (view UCSC Genome Browser custom track) | 
| Alignm length: | 237 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 6e-35 | 
| Alignm gaps (pig, cow): | 18, 10 | 
| Conread position: | 205-464 | 
| Cow position: | chr6:37644213-37644479 (view UCSC Genome Browser custom track) | 
| Alignm length: | 269 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 7e-26 | 
| Alignm gaps (pig, cow): | 76, 11 | 
| Conread position: | 205-475 | 
| Cow position: | chr6:16397532-16397266 (view UCSC Genome Browser custom track) | 
| Alignm length: | 274 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 8 | 
| Conread position: | 205-479 | 
| Cow position: | chr6:18977267-18977551 (view UCSC Genome Browser custom track) | 
| Alignm length: | 290 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 102, 79 | 
| Conread position: | 205-481 | 
| Cow position: | chr6:63197518-63197243 (view UCSC Genome Browser custom track) | 
| Alignm length: | 283 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 97, 11 | 
| Conread position: | 205-482 | 
| Cow position: | chr6:4681403-4681687 (view UCSC Genome Browser custom track) | 
| Alignm length: | 289 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 37, 150 | 
| Conread position: | 205-482 | 
| Cow position: | chr6:14706763-14706488 (view UCSC Genome Browser custom track) | 
| Alignm length: | 279 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 8e-38 | 
| Alignm gaps (pig, cow): | 161, 11 | 
| Conread position: | 205-483 | 
| Cow position: | chr6:54806871-54807155 (view UCSC Genome Browser custom track) | 
| Alignm length: | 285 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 103, 0 | 
| Conread position: | 205-488 | 
| Cow position: | chr6:24649504-24649787 (view UCSC Genome Browser custom track) | 
| Alignm length: | 293 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 102, 8 | 
| Conread position: | 205-491 | 
| Cow position: | chr6:23003754-23003476 (view UCSC Genome Browser custom track) | 
| Alignm length: | 288 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 6e-36 | 
| Alignm gaps (pig, cow): | 33, 86 | 
| Conread position: | 205-491 | 
| Cow position: | chr6:24583588-24583294 (view UCSC Genome Browser custom track) | 
| Alignm length: | 297 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 12, 76 | 
| Conread position: | 205-491 | 
| Cow position: | chr6:31688733-31688450 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 5e-34 | 
| Alignm gaps (pig, cow): | 18, 100 | 
| Conread position: | 205-493 | 
| Cow position: | chr6:16625595-16625884 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 4e-31 | 
| Alignm gaps (pig, cow): | 12, 157 | 
| Conread position: | 205-497 | 
| Cow position: | chr6:61162362-61162653 (view UCSC Genome Browser custom track) | 
| Alignm length: | 298 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 20, 119 | 
| Conread position: | 205-498 | 
| Cow position: | chr6:13693936-13693641 (view UCSC Genome Browser custom track) | 
| Alignm length: | 300 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 23, 158 | 
| Conread position: | 205-512 | 
| Cow position: | chr6:58073690-58074005 (view UCSC Genome Browser custom track) | 
| Alignm length: | 318 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 12, 220 | 
| Conread position: | 205-518 | 
| Cow position: | chr6:58075876-58076193 (view UCSC Genome Browser custom track) | 
| Alignm length: | 322 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 119 | 
| Conread position: | 205-521 | 
| Cow position: | chr6:43389713-43390036 (view UCSC Genome Browser custom track) | 
| Alignm length: | 324 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 102, 0 | 
| Conread position: | 205-567 | 
| Cow position: | chr6:16675473-16675822 (view UCSC Genome Browser custom track) | 
| Alignm length: | 369 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 12, 102 | 
| Conread position: | 206-320 | 
| Cow position: | chr6:28100866-28100751 (view UCSC Genome Browser custom track) | 
| Alignm length: | 117 | 
| Alignm identity: | 98 | 
| Alignm E-value: | 7e-26 | 
| Alignm gaps (pig, cow): | 101, 7 | 
| Conread position: | 206-334 | 
| Cow position: | chr6:55366748-55366619 (view UCSC Genome Browser custom track) | 
| Alignm length: | 131 | 
| Alignm identity: | 100 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 101, 10 | 
| Conread position: | 206-506 | 
| Cow position: | chr6:50423750-50423449 (view UCSC Genome Browser custom track) | 
| Alignm length: | 308 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 101, 7 | 
| Conread position: | 206-555 | 
| Cow position: | chr6:26728876-26728517 (view UCSC Genome Browser custom track) | 
| Alignm length: | 363 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 101, 9 | 
| Conread position: | 207-386 | 
| Cow position: | chr6:34608885-34608703 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 38, 0 | 
| Conread position: | 207-404 | 
| Cow position: | chr6:16230547-16230737 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 181, 94 | 
| Conread position: | 207-480 | 
| Cow position: | chr6:39797929-39797649 (view UCSC Genome Browser custom track) | 
| Alignm length: | 281 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 207-505 | 
| Cow position: | chr6:54963720-54963426 (view UCSC Genome Browser custom track) | 
| Alignm length: | 302 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 100, 200 | 
| Conread position: | 207-511 | 
| Cow position: | chr6:26413033-26413336 (view UCSC Genome Browser custom track) | 
| Alignm length: | 308 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 31 | 
| Conread position: | 207-511 | 
| Cow position: | chr6:62592910-62592598 (view UCSC Genome Browser custom track) | 
| Alignm length: | 313 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 5.00264e-43 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 207-520 | 
| Cow position: | chr6:875675-875354 (view UCSC Genome Browser custom track) | 
| Alignm length: | 323 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 26, 41 | 
| Conread position: | 207-521 | 
| Cow position: | chr6:13605579-13605258 (view UCSC Genome Browser custom track) | 
| Alignm length: | 322 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 207-521 | 
| Cow position: | chr6:13619821-13619500 (view UCSC Genome Browser custom track) | 
| Alignm length: | 322 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 207-521 | 
| Cow position: | chr6:40710175-40710496 (view UCSC Genome Browser custom track) | 
| Alignm length: | 322 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 207-521 | 
| Cow position: | chr6:45210944-45211265 (view UCSC Genome Browser custom track) | 
| Alignm length: | 322 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 207-521 | 
| Cow position: | chr6:55582347-55582026 (view UCSC Genome Browser custom track) | 
| Alignm length: | 322 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 208-373 | 
| Cow position: | chr6:28509512-28509678 (view UCSC Genome Browser custom track) | 
| Alignm length: | 168 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 99, 31 | 
| Conread position: | 208-434 | 
| Cow position: | chr6:4824618-4824842 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 99, 127 | 
| Conread position: | 208-480 | 
| Cow position: | chr6:41961314-41961039 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 13, 7 | 
| Conread position: | 208-491 | 
| Cow position: | chr6:619199-619496 (view UCSC Genome Browser custom track) | 
| Alignm length: | 298 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 4e-31 | 
| Alignm gaps (pig, cow): | 99, 0 | 
| Conread position: | 208-518 | 
| Cow position: | chr6:56849653-56849975 (view UCSC Genome Browser custom track) | 
| Alignm length: | 330 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 77, 242 | 
| Conread position: | 208-521 | 
| Cow position: | chr6:62851627-62851309 (view UCSC Genome Browser custom track) | 
| Alignm length: | 323 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 34, 7 | 
| Conread position: | 208-521 | 
| Cow position: | chr6:68871128-68870808 (view UCSC Genome Browser custom track) | 
| Alignm length: | 321 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 99, 0 | 
| Conread position: | 208-568 | 
| Cow position: | chr6:17090244-17090621 (view UCSC Genome Browser custom track) | 
| Alignm length: | 384 | 
| Alignm identity: | 259 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 91, 159 | 
| Conread position: | 209-323 | 
| Cow position: | chr6:30473938-30474054 (view UCSC Genome Browser custom track) | 
| Alignm length: | 117 | 
| Alignm identity: | 92 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 98, 0 | 
| Conread position: | 209-367 | 
| Cow position: | chr6:21608149-21608303 (view UCSC Genome Browser custom track) | 
| Alignm length: | 161 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 98, 13 | 
| Conread position: | 209-425 | 
| Cow position: | chr6:35132818-35133036 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 12, 6 | 
| Conread position: | 209-469 | 
| Cow position: | chr6:1944382-1944638 (view UCSC Genome Browser custom track) | 
| Alignm length: | 264 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 153 | 
| Conread position: | 209-476 | 
| Cow position: | chr6:38988021-38987754 (view UCSC Genome Browser custom track) | 
| Alignm length: | 270 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 93, 131 | 
| Conread position: | 209-482 | 
| Cow position: | chr6:23889005-23888733 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 5e-34 | 
| Alignm gaps (pig, cow): | 95, 6 | 
| Conread position: | 209-482 | 
| Cow position: | chr6:48946713-48946444 (view UCSC Genome Browser custom track) | 
| Alignm length: | 277 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 9e-29 | 
| Alignm gaps (pig, cow): | 151, 115 | 
| Conread position: | 209-482 | 
| Cow position: | chr6:52002022-52002295 (view UCSC Genome Browser custom track) | 
| Alignm length: | 276 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 111 | 
| Conread position: | 209-483 | 
| Cow position: | chr6:55474903-55475174 (view UCSC Genome Browser custom track) | 
| Alignm length: | 277 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 7 | 
| Conread position: | 209-488 | 
| Cow position: | chr6:19427103-19427387 (view UCSC Genome Browser custom track) | 
| Alignm length: | 287 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 98, 7 | 
| Conread position: | 209-491 | 
| Cow position: | chr6:16518204-16517922 (view UCSC Genome Browser custom track) | 
| Alignm length: | 289 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 8e-38 | 
| Alignm gaps (pig, cow): | 98, 152 | 
| Conread position: | 209-495 | 
| Cow position: | chr6:33895601-33895329 (view UCSC Genome Browser custom track) | 
| Alignm length: | 289 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 106, 95 | 
| Conread position: | 209-496 | 
| Cow position: | chr6:11160364-11160065 (view UCSC Genome Browser custom track) | 
| Alignm length: | 302 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 98, 17 | 
| Conread position: | 209-496 | 
| Cow position: | chr6:51071356-51071655 (view UCSC Genome Browser custom track) | 
| Alignm length: | 302 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 7e-37 | 
| Alignm gaps (pig, cow): | 93, 158 | 
| Conread position: | 209-497 | 
| Cow position: | chr6:67968978-67968668 (view UCSC Genome Browser custom track) | 
| Alignm length: | 313 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 6e-36 | 
| Alignm gaps (pig, cow): | 84, 7 | 
| Conread position: | 209-498 | 
| Cow position: | chr6:24902484-24902195 (view UCSC Genome Browser custom track) | 
| Alignm length: | 296 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 96, 27 | 
| Conread position: | 209-511 | 
| Cow position: | chr6:47304980-47305296 (view UCSC Genome Browser custom track) | 
| Alignm length: | 318 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 143 | 
| Conread position: | 209-514 | 
| Cow position: | chr6:12844962-12845271 (view UCSC Genome Browser custom track) | 
| Alignm length: | 317 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 97, 159 | 
| Conread position: | 209-518 | 
| Cow position: | chr6:15305241-15305544 (view UCSC Genome Browser custom track) | 
| Alignm length: | 313 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 109 | 
| Conread position: | 209-518 | 
| Cow position: | chr6:24781912-24781593 (view UCSC Genome Browser custom track) | 
| Alignm length: | 321 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 154 | 
| Conread position: | 209-518 | 
| Cow position: | chr6:35842313-35842618 (view UCSC Genome Browser custom track) | 
| Alignm length: | 317 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 143 | 
| Conread position: | 209-518 | 
| Cow position: | chr6:63047229-63047542 (view UCSC Genome Browser custom track) | 
| Alignm length: | 315 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 72 | 
| Conread position: | 209-519 | 
| Cow position: | chr6:10106348-10106027 (view UCSC Genome Browser custom track) | 
| Alignm length: | 323 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 97, 280 | 
| Conread position: | 209-566 | 
| Cow position: | chr6:8209932-8209580 (view UCSC Genome Browser custom track) | 
| Alignm length: | 362 | 
| Alignm identity: | 254 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 96, 6 | 
| Conread position: | 210-503 | 
| Cow position: | chr6:10107303-10107602 (view UCSC Genome Browser custom track) | 
| Alignm length: | 302 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 5.04467e-44 | 
| Alignm gaps (pig, cow): | 100, 49 | 
| Conread position: | 210-521 | 
| Cow position: | chr6:26925737-26925420 (view UCSC Genome Browser custom track) | 
| Alignm length: | 319 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 5.00264e-43 | 
| Alignm gaps (pig, cow): | 97, 169 | 
| Conread position: | 210-521 | 
| Cow position: | chr6:33897573-33897265 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 5e-33 | 
| Alignm gaps (pig, cow): | 97, 132 | 
| Conread position: | 212-521 | 
| Cow position: | chr6:41033718-41034033 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 9e-39 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 213-521 | 
| Cow position: | chr6:58605938-58606249 (view UCSC Genome Browser custom track) | 
| Alignm length: | 314 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 94, 207 | 
| Conread position: | 213-632 | 
| Cow position: | chr6:456837-457262 (view UCSC Genome Browser custom track) | 
| Alignm length: | 437 | 
| Alignm identity: | 309 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 78, 55 | 
| Conread position: | 214-495 | 
| Cow position: | chr6:17871055-17871344 (view UCSC Genome Browser custom track) | 
| Alignm length: | 290 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 7e-37 | 
| Alignm gaps (pig, cow): | 93, 0 | 
| Conread position: | 215-483 | 
| Cow position: | chr6:48468460-48468733 (view UCSC Genome Browser custom track) | 
| Alignm length: | 275 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 82, 212 | 
| Conread position: | 215-512 | 
| Cow position: | chr6:35990568-35990276 (view UCSC Genome Browser custom track) | 
| Alignm length: | 308 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 92, 20 | 
| Conread position: | 215-518 | 
| Cow position: | chr6:66532144-66531858 (view UCSC Genome Browser custom track) | 
| Alignm length: | 309 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 5e-34 | 
| Alignm gaps (pig, cow): | 92, 116 | 
| Conread position: | 217-425 | 
| Cow position: | chr6:55387855-55388067 (view UCSC Genome Browser custom track) | 
| Alignm length: | 214 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 7e-26 | 
| Alignm gaps (pig, cow): | 16, 75 | 
| Conread position: | 218-431 | 
| Cow position: | chr6:47848039-47847825 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 4e-31 | 
| Alignm gaps (pig, cow): | 92, 110 | 
| Conread position: | 218-491 | 
| Cow position: | chr6:57474041-57474315 (view UCSC Genome Browser custom track) | 
| Alignm length: | 276 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 89, 209 | 
| Conread position: | 219-425 | 
| Cow position: | chr6:64815361-64815142 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 88, 0 | 
| Conread position: | 219-481 | 
| Cow position: | chr6:32858559-32858824 (view UCSC Genome Browser custom track) | 
| Alignm length: | 269 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 7e-37 | 
| Alignm gaps (pig, cow): | 50, 86 | 
| Conread position: | 219-484 | 
| Cow position: | chr6:39099421-39099156 (view UCSC Genome Browser custom track) | 
| Alignm length: | 272 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 88, 177 | 
| Conread position: | 220-482 | 
| Cow position: | chr6:31747797-31747532 (view UCSC Genome Browser custom track) | 
| Alignm length: | 268 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 78, 61 | 
| Conread position: | 220-512 | 
| Cow position: | chr6:54867182-54867471 (view UCSC Genome Browser custom track) | 
| Alignm length: | 299 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 90, 43 | 
| Conread position: | 222-355 | 
| Cow position: | chr6:34693248-34693380 (view UCSC Genome Browser custom track) | 
| Alignm length: | 136 | 
| Alignm identity: | 104 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 85, 23 | 
| Conread position: | 222-479 | 
| Cow position: | chr6:9788719-9788989 (view UCSC Genome Browser custom track) | 
| Alignm length: | 271 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 68, 0 | 
| Conread position: | 222-482 | 
| Cow position: | chr6:48655397-48655143 (view UCSC Genome Browser custom track) | 
| Alignm length: | 261 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 17, 0 | 
| Conread position: | 222-496 | 
| Cow position: | chr6:58594446-58594164 (view UCSC Genome Browser custom track) | 
| Alignm length: | 286 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 7e-37 | 
| Alignm gaps (pig, cow): | 85, 109 | 
| Conread position: | 222-512 | 
| Cow position: | chr6:55608141-55607855 (view UCSC Genome Browser custom track) | 
| Alignm length: | 294 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 85, 215 | 
| Conread position: | 222-518 | 
| Cow position: | chr6:3017104-3017411 (view UCSC Genome Browser custom track) | 
| Alignm length: | 314 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 4e-31 | 
| Alignm gaps (pig, cow): | 85, 155 | 
| Conread position: | 222-518 | 
| Cow position: | chr6:44078182-44078480 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 85, 33 | 
| Conread position: | 222-519 | 
| Cow position: | chr6:28482679-28482984 (view UCSC Genome Browser custom track) | 
| Alignm length: | 306 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 19, 0 | 
| Conread position: | 222-521 | 
| Cow position: | chr6:13307592-13307285 (view UCSC Genome Browser custom track) | 
| Alignm length: | 308 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 85, 0 | 
| Conread position: | 222-521 | 
| Cow position: | chr6:24125619-24125316 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 8, 129 | 
| Conread position: | 222-620 | 
| Cow position: | chr6:15242519-15242903 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 287 | 
| Alignm E-value: | 9e-39 | 
| Alignm gaps (pig, cow): | 213, 61 | 
| Conread position: | 223-354 | 
| Cow position: | chr6:1228956-1228823 (view UCSC Genome Browser custom track) | 
| Alignm length: | 134 | 
| Alignm identity: | 108 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 84, 0 | 
| Conread position: | 223-387 | 
| Cow position: | chr6:35260514-35260680 (view UCSC Genome Browser custom track) | 
| Alignm length: | 167 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 83, 0 | 
| Conread position: | 223-406 | 
| Cow position: | chr6:34405167-34404982 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 4e-31 | 
| Alignm gaps (pig, cow): | 84, 0 | 
| Conread position: | 223-425 | 
| Cow position: | chr6:35180670-35180465 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 7e-26 | 
| Alignm gaps (pig, cow): | 84, 20 | 
| Conread position: | 223-433 | 
| Cow position: | chr6:68663245-68663031 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 4e-31 | 
| Alignm gaps (pig, cow): | 84, 0 | 
| Conread position: | 223-482 | 
| Cow position: | chr6:68297914-68297657 (view UCSC Genome Browser custom track) | 
| Alignm length: | 263 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 6e-35 | 
| Alignm gaps (pig, cow): | 203, 83 | 
| Conread position: | 223-497 | 
| Cow position: | chr6:57796231-57795950 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 84, 0 | 
| Conread position: | 223-512 | 
| Cow position: | chr6:5672896-5673194 (view UCSC Genome Browser custom track) | 
| Alignm length: | 300 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 82, 64 | 
| Conread position: | 223-518 | 
| Cow position: | chr6:28811329-28811032 (view UCSC Genome Browser custom track) | 
| Alignm length: | 301 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 6e-36 | 
| Alignm gaps (pig, cow): | 84, 260 | 
| Conread position: | 223-521 | 
| Cow position: | chr6:1957105-1956800 (view UCSC Genome Browser custom track) | 
| Alignm length: | 306 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 3.99931e-42 | 
| Alignm gaps (pig, cow): | 84, 0 | 
| Conread position: | 223-521 | 
| Cow position: | chr6:15882008-15881704 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 5.00264e-43 | 
| Alignm gaps (pig, cow): | 84, 0 | 
| Conread position: | 223-521 | 
| Cow position: | chr6:19737343-19737648 (view UCSC Genome Browser custom track) | 
| Alignm length: | 306 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 84, 0 | 
| Conread position: | 223-521 | 
| Cow position: | chr6:27939593-27939898 (view UCSC Genome Browser custom track) | 
| Alignm length: | 306 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 84, 0 | 
| Conread position: | 223-521 | 
| Cow position: | chr6:32054868-32054567 (view UCSC Genome Browser custom track) | 
| Alignm length: | 304 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 211, 84 | 
| Conread position: | 223-521 | 
| Cow position: | chr6:37217434-37217739 (view UCSC Genome Browser custom track) | 
| Alignm length: | 306 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 84, 0 | 
| Conread position: | 223-521 | 
| Cow position: | chr6:38053555-38053860 (view UCSC Genome Browser custom track) | 
| Alignm length: | 306 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 79, 0 | 
| Conread position: | 223-521 | 
| Cow position: | chr6:43604437-43604742 (view UCSC Genome Browser custom track) | 
| Alignm length: | 306 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 5.00264e-43 | 
| Alignm gaps (pig, cow): | 84, 0 | 
| Conread position: | 223-521 | 
| Cow position: | chr6:58761759-58762068 (view UCSC Genome Browser custom track) | 
| Alignm length: | 310 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 84, 0 | 
| Conread position: | 223-525 | 
| Cow position: | chr6:10536123-10535814 (view UCSC Genome Browser custom track) | 
| Alignm length: | 310 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 84, 0 | 
| Conread position: | 223-530 | 
| Cow position: | chr6:48421994-48421682 (view UCSC Genome Browser custom track) | 
| Alignm length: | 314 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 76, 276 | 
| Conread position: | 224-425 | 
| Cow position: | chr6:22746322-22746524 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 9e-29 | 
| Alignm gaps (pig, cow): | 17, 73 | 
| Conread position: | 226-348 | 
| Cow position: | chr6:16060103-16059979 (view UCSC Genome Browser custom track) | 
| Alignm length: | 125 | 
| Alignm identity: | 98 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 81, 0 | 
| Conread position: | 226-367 | 
| Cow position: | chr6:37148491-37148633 (view UCSC Genome Browser custom track) | 
| Alignm length: | 144 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 4e-31 | 
| Alignm gaps (pig, cow): | 79, 115 | 
| Conread position: | 226-430 | 
| Cow position: | chr6:61269004-61269202 (view UCSC Genome Browser custom track) | 
| Alignm length: | 205 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 8e-38 | 
| Alignm gaps (pig, cow): | 81, 0 | 
| Conread position: | 226-480 | 
| Cow position: | chr6:26837715-26837460 (view UCSC Genome Browser custom track) | 
| Alignm length: | 261 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 9e-39 | 
| Alignm gaps (pig, cow): | 81, 65 | 
| Conread position: | 226-482 | 
| Cow position: | chr6:42693032-42693293 (view UCSC Genome Browser custom track) | 
| Alignm length: | 264 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 81, 137 | 
| Conread position: | 226-482 | 
| Cow position: | chr6:60152705-60152963 (view UCSC Genome Browser custom track) | 
| Alignm length: | 259 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 9e-39 | 
| Alignm gaps (pig, cow): | 76, 0 | 
| Conread position: | 226-490 | 
| Cow position: | chr6:35613758-35613480 (view UCSC Genome Browser custom track) | 
| Alignm length: | 280 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 81, 267 | 
| Conread position: | 226-496 | 
| Cow position: | chr6:48794336-48794058 (view UCSC Genome Browser custom track) | 
| Alignm length: | 281 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 7e-37 | 
| Alignm gaps (pig, cow): | 39, 29 | 
| Conread position: | 226-504 | 
| Cow position: | chr6:34111265-34110980 (view UCSC Genome Browser custom track) | 
| Alignm length: | 286 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 81, 0 | 
| Conread position: | 226-515 | 
| Cow position: | chr6:36195883-36196174 (view UCSC Genome Browser custom track) | 
| Alignm length: | 293 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 81, 254 | 
| Conread position: | 226-519 | 
| Cow position: | chr6:58589705-58589982 (view UCSC Genome Browser custom track) | 
| Alignm length: | 295 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 8e-27 | 
| Alignm gaps (pig, cow): | 252, 92 | 
| Conread position: | 226-521 | 
| Cow position: | chr6:7216501-7216799 (view UCSC Genome Browser custom track) | 
| Alignm length: | 299 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 5.00264e-43 | 
| Alignm gaps (pig, cow): | 81, 0 | 
| Conread position: | 226-521 | 
| Cow position: | chr6:43404259-43404560 (view UCSC Genome Browser custom track) | 
| Alignm length: | 303 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 81, 285 | 
| Conread position: | 226-521 | 
| Cow position: | chr6:54980771-54981075 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 81, 0 | 
| Conread position: | 226-560 | 
| Cow position: | chr6:10176629-10176283 (view UCSC Genome Browser custom track) | 
| Alignm length: | 352 | 
| Alignm identity: | 262 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 89, 80 | 
| Conread position: | 227-433 | 
| Cow position: | chr6:31151768-31151973 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 81, 116 | 
| Conread position: | 227-512 | 
| Cow position: | chr6:54140489-54140767 (view UCSC Genome Browser custom track) | 
| Alignm length: | 290 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 77, 12 | 
| Conread position: | 227-521 | 
| Cow position: | chr6:8526966-8527267 (view UCSC Genome Browser custom track) | 
| Alignm length: | 302 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 8e-28 | 
| Alignm gaps (pig, cow): | 80, 0 | 
| Conread position: | 229-521 | 
| Cow position: | chr6:10459410-10459701 (view UCSC Genome Browser custom track) | 
| Alignm length: | 299 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 8e-38 | 
| Alignm gaps (pig, cow): | 78, 52 | 
| Conread position: | 230-474 | 
| Cow position: | chr6:38776274-38776524 (view UCSC Genome Browser custom track) | 
| Alignm length: | 251 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 77, 0 | 
| Conread position: | 230-498 | 
| Cow position: | chr6:3936220-3936484 (view UCSC Genome Browser custom track) | 
| Alignm length: | 275 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 77, 87 | 
| Conread position: | 231-373 | 
| Cow position: | chr6:62808833-62808976 (view UCSC Genome Browser custom track) | 
| Alignm length: | 145 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 76, 138 | 
| Conread position: | 231-515 | 
| Cow position: | chr6:10649344-10649064 (view UCSC Genome Browser custom track) | 
| Alignm length: | 289 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 71, 146 | 
| Conread position: | 231-519 | 
| Cow position: | chr6:50446085-50445796 (view UCSC Genome Browser custom track) | 
| Alignm length: | 295 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 130 | 
| Conread position: | 232-391 | 
| Cow position: | chr6:18904896-18904737 (view UCSC Genome Browser custom track) | 
| Alignm length: | 162 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 75, 129 | 
| Conread position: | 232-482 | 
| Cow position: | chr6:29284370-29284622 (view UCSC Genome Browser custom track) | 
| Alignm length: | 258 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 9e-29 | 
| Alignm gaps (pig, cow): | 78, 36 | 
| Conread position: | 232-488 | 
| Cow position: | chr6:16430747-16430487 (view UCSC Genome Browser custom track) | 
| Alignm length: | 262 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 6e-25 | 
| Alignm gaps (pig, cow): | 75, 219 | 
| Conread position: | 232-497 | 
| Cow position: | chr6:12934464-12934197 (view UCSC Genome Browser custom track) | 
| Alignm length: | 270 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 76, 215 | 
| Conread position: | 232-506 | 
| Cow position: | chr6:63716080-63716354 (view UCSC Genome Browser custom track) | 
| Alignm length: | 280 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 75, 153 | 
| Conread position: | 232-510 | 
| Cow position: | chr6:28148519-28148790 (view UCSC Genome Browser custom track) | 
| Alignm length: | 287 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 9, 108 | 
| Conread position: | 232-511 | 
| Cow position: | chr6:14827004-14827283 (view UCSC Genome Browser custom track) | 
| Alignm length: | 284 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 6e-36 | 
| Alignm gaps (pig, cow): | 76, 36 | 
| Conread position: | 232-520 | 
| Cow position: | chr6:24074891-24074596 (view UCSC Genome Browser custom track) | 
| Alignm length: | 296 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 232-528 | 
| Cow position: | chr6:19681841-19681549 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 73, 99 | 
| Conread position: | 233-424 | 
| Cow position: | chr6:55573431-55573238 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 74, 0 | 
| Conread position: | 233-433 | 
| Cow position: | chr6:65891256-65891057 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 74, 158 | 
| Conread position: | 233-483 | 
| Cow position: | chr6:12116374-12116122 (view UCSC Genome Browser custom track) | 
| Alignm length: | 256 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 75, 26 | 
| Conread position: | 233-496 | 
| Cow position: | chr6:57685835-57686099 (view UCSC Genome Browser custom track) | 
| Alignm length: | 270 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 74, 211 | 
| Conread position: | 233-502 | 
| Cow position: | chr6:65261029-65260759 (view UCSC Genome Browser custom track) | 
| Alignm length: | 275 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 51, 91 | 
| Conread position: | 233-521 | 
| Cow position: | chr6:561296-561590 (view UCSC Genome Browser custom track) | 
| Alignm length: | 296 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 95, 81 | 
| Conread position: | 234-480 | 
| Cow position: | chr6:62578610-62578863 (view UCSC Genome Browser custom track) | 
| Alignm length: | 254 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 73, 0 | 
| Conread position: | 234-496 | 
| Cow position: | chr6:20255703-20255448 (view UCSC Genome Browser custom track) | 
| Alignm length: | 265 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 5e-34 | 
| Alignm gaps (pig, cow): | 104, 72 | 
| Conread position: | 236-424 | 
| Cow position: | chr6:44510914-44511109 (view UCSC Genome Browser custom track) | 
| Alignm length: | 196 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 71, 0 | 
| Conread position: | 236-506 | 
| Cow position: | chr6:57597320-57597042 (view UCSC Genome Browser custom track) | 
| Alignm length: | 281 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 6e-35 | 
| Alignm gaps (pig, cow): | 66, 187 | 
| Conread position: | 237-495 | 
| Cow position: | chr6:20056313-20056572 (view UCSC Genome Browser custom track) | 
| Alignm length: | 265 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 4e-31 | 
| Alignm gaps (pig, cow): | 70, 6 | 
| Conread position: | 239-385 | 
| Cow position: | chr6:21302301-21302446 (view UCSC Genome Browser custom track) | 
| Alignm length: | 148 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 8e-28 | 
| Alignm gaps (pig, cow): | 76, 67 | 
| Conread position: | 239-433 | 
| Cow position: | chr6:6239849-6240049 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 68, 0 | 
| Conread position: | 239-433 | 
| Cow position: | chr6:27366005-27366199 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 66, 122 | 
| Conread position: | 239-506 | 
| Cow position: | chr6:28276342-28276616 (view UCSC Genome Browser custom track) | 
| Alignm length: | 276 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 68, 262 | 
| Conread position: | 239-511 | 
| Cow position: | chr6:1538486-1538756 (view UCSC Genome Browser custom track) | 
| Alignm length: | 280 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 6e-35 | 
| Alignm gaps (pig, cow): | 66, 85 | 
| Conread position: | 239-585 | 
| Cow position: | chr6:32121593-32121941 (view UCSC Genome Browser custom track) | 
| Alignm length: | 353 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 68, 254 | 
| Conread position: | 240-491 | 
| Cow position: | chr6:47625275-47625028 (view UCSC Genome Browser custom track) | 
| Alignm length: | 254 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 67, 25 | 
| Conread position: | 240-506 | 
| Cow position: | chr6:15137337-15137068 (view UCSC Genome Browser custom track) | 
| Alignm length: | 270 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 67, 0 | 
| Conread position: | 240-512 | 
| Cow position: | chr6:20231142-20230871 (view UCSC Genome Browser custom track) | 
| Alignm length: | 278 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 139 | 
| Conread position: | 240-521 | 
| Cow position: | chr6:44535998-44535716 (view UCSC Genome Browser custom track) | 
| Alignm length: | 289 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 6e-25 | 
| Alignm gaps (pig, cow): | 37, 70 | 
| Conread position: | 240-522 | 
| Cow position: | chr6:60859620-60859334 (view UCSC Genome Browser custom track) | 
| Alignm length: | 291 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 80, 71 | 
| Conread position: | 241-405 | 
| Cow position: | chr6:27887739-27887907 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 28, 0 | 
| Conread position: | 241-433 | 
| Cow position: | chr6:54841219-54841021 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 5e-33 | 
| Alignm gaps (pig, cow): | 56, 174 | 
| Conread position: | 241-521 | 
| Cow position: | chr6:36299494-36299207 (view UCSC Genome Browser custom track) | 
| Alignm length: | 288 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 66, 0 | 
| Conread position: | 242-425 | 
| Cow position: | chr6:32461881-32461696 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 63, 0 | 
| Conread position: | 242-433 | 
| Cow position: | chr6:13345228-13345035 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 65, 0 | 
| Conread position: | 242-477 | 
| Cow position: | chr6:6117871-6117628 (view UCSC Genome Browser custom track) | 
| Alignm length: | 245 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 3.99931e-42 | 
| Alignm gaps (pig, cow): | 68, 231 | 
| Conread position: | 242-491 | 
| Cow position: | chr6:38594815-38594569 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 9e-29 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 242-495 | 
| Cow position: | chr6:30285374-30285630 (view UCSC Genome Browser custom track) | 
| Alignm length: | 262 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 60, 116 | 
| Conread position: | 242-512 | 
| Cow position: | chr6:13688124-13687856 (view UCSC Genome Browser custom track) | 
| Alignm length: | 274 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 5.00264e-43 | 
| Alignm gaps (pig, cow): | 65, 21 | 
| Conread position: | 242-530 | 
| Cow position: | chr6:52120925-52121212 (view UCSC Genome Browser custom track) | 
| Alignm length: | 295 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 8e-27 | 
| Alignm gaps (pig, cow): | 58, 85 | 
| Conread position: | 243-471 | 
| Cow position: | chr6:60344045-60344274 (view UCSC Genome Browser custom track) | 
| Alignm length: | 233 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 42, 152 | 
| Conread position: | 243-482 | 
| Cow position: | chr6:41152339-41152577 (view UCSC Genome Browser custom track) | 
| Alignm length: | 245 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 85, 64 | 
| Conread position: | 243-498 | 
| Cow position: | chr6:12337671-12337930 (view UCSC Genome Browser custom track) | 
| Alignm length: | 261 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 64, 125 | 
| Conread position: | 243-512 | 
| Cow position: | chr6:12500543-12500819 (view UCSC Genome Browser custom track) | 
| Alignm length: | 277 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 0 | 
| Conread position: | 244-496 | 
| Cow position: | chr6:52308021-52308286 (view UCSC Genome Browser custom track) | 
| Alignm length: | 266 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 63, 0 | 
| Conread position: | 244-521 | 
| Cow position: | chr6:43014494-43014210 (view UCSC Genome Browser custom track) | 
| Alignm length: | 285 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 63, 0 | 
| Conread position: | 244-539 | 
| Cow position: | chr6:58439668-58439954 (view UCSC Genome Browser custom track) | 
| Alignm length: | 307 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 63, 94 | 
| Conread position: | 244-581 | 
| Cow position: | chr6:50042793-50043132 (view UCSC Genome Browser custom track) | 
| Alignm length: | 340 | 
| Alignm identity: | 104 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 63, 0 | 
| Conread position: | 245-386 | 
| Cow position: | chr6:7010422-7010280 (view UCSC Genome Browser custom track) | 
| Alignm length: | 146 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 7, 74 | 
| Conread position: | 245-415 | 
| Cow position: | chr6:50527774-50527602 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 8e-27 | 
| Alignm gaps (pig, cow): | 62, 0 | 
| Conread position: | 245-515 | 
| Cow position: | chr6:40264511-40264240 (view UCSC Genome Browser custom track) | 
| Alignm length: | 276 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 5.00264e-43 | 
| Alignm gaps (pig, cow): | 16, 195 | 
| Conread position: | 246-401 | 
| Cow position: | chr6:67044660-67044816 (view UCSC Genome Browser custom track) | 
| Alignm length: | 158 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 5e-34 | 
| Alignm gaps (pig, cow): | 61, 41 | 
| Conread position: | 246-518 | 
| Cow position: | chr6:46557747-46558017 (view UCSC Genome Browser custom track) | 
| Alignm length: | 277 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 58, 107 | 
| Conread position: | 247-476 | 
| Cow position: | chr6:68127144-68127379 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 6e-35 | 
| Alignm gaps (pig, cow): | 58, 0 | 
| Conread position: | 247-480 | 
| Cow position: | chr6:61452201-61452436 (view UCSC Genome Browser custom track) | 
| Alignm length: | 238 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 49, 80 | 
| Conread position: | 247-481 | 
| Cow position: | chr6:1104358-1104126 (view UCSC Genome Browser custom track) | 
| Alignm length: | 239 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 60, 51 | 
| Conread position: | 247-491 | 
| Cow position: | chr6:60467718-60467959 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 121 | 
| Conread position: | 247-518 | 
| Cow position: | chr6:21587731-21587453 (view UCSC Genome Browser custom track) | 
| Alignm length: | 279 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 58, 0 | 
| Conread position: | 248-520 | 
| Cow position: | chr6:51296527-51296249 (view UCSC Genome Browser custom track) | 
| Alignm length: | 280 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 5e-34 | 
| Alignm gaps (pig, cow): | 59, 52 | 
| Conread position: | 249-363 | 
| Cow position: | chr6:56596967-56597083 (view UCSC Genome Browser custom track) | 
| Alignm length: | 117 | 
| Alignm identity: | 96 | 
| Alignm E-value: | 6e-25 | 
| Alignm gaps (pig, cow): | 58, 0 | 
| Conread position: | 249-616 | 
| Cow position: | chr6:611260-611618 (view UCSC Genome Browser custom track) | 
| Alignm length: | 374 | 
| Alignm identity: | 258 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 59, 9 | 
| Conread position: | 250-491 | 
| Cow position: | chr6:5329848-5330086 (view UCSC Genome Browser custom track) | 
| Alignm length: | 246 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 8e-38 | 
| Alignm gaps (pig, cow): | 57, 103 | 
| Conread position: | 250-515 | 
| Cow position: | chr6:28559113-28559384 (view UCSC Genome Browser custom track) | 
| Alignm length: | 276 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 185, 17 | 
| Conread position: | 251-479 | 
| Cow position: | chr6:16492220-16491994 (view UCSC Genome Browser custom track) | 
| Alignm length: | 233 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 183, 49 | 
| Conread position: | 251-512 | 
| Cow position: | chr6:7312286-7312553 (view UCSC Genome Browser custom track) | 
| Alignm length: | 270 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 90, 56 | 
| Conread position: | 252-433 | 
| Cow position: | chr6:58315742-58315924 (view UCSC Genome Browser custom track) | 
| Alignm length: | 187 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 55, 124 | 
| Conread position: | 252-508 | 
| Cow position: | chr6:57777323-57777076 (view UCSC Genome Browser custom track) | 
| Alignm length: | 263 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 183, 16 | 
| Conread position: | 253-433 | 
| Cow position: | chr6:7174813-7174631 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 9e-29 | 
| Alignm gaps (pig, cow): | 54, 0 | 
| Conread position: | 253-521 | 
| Cow position: | chr6:21300825-21300550 (view UCSC Genome Browser custom track) | 
| Alignm length: | 276 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 4e-31 | 
| Alignm gaps (pig, cow): | 54, 0 | 
| Conread position: | 254-511 | 
| Cow position: | chr6:45775700-45775443 (view UCSC Genome Browser custom track) | 
| Alignm length: | 261 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 53, 125 | 
| Conread position: | 254-518 | 
| Cow position: | chr6:31525749-31526006 (view UCSC Genome Browser custom track) | 
| Alignm length: | 267 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 53, 68 | 
| Conread position: | 254-521 | 
| Cow position: | chr6:55956407-55956142 (view UCSC Genome Browser custom track) | 
| Alignm length: | 275 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 53, 95 | 
| Conread position: | 255-521 | 
| Cow position: | chr6:56926895-56927168 (view UCSC Genome Browser custom track) | 
| Alignm length: | 274 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 5e-33 | 
| Alignm gaps (pig, cow): | 53, 0 | 
| Conread position: | 256-414 | 
| Cow position: | chr6:41214386-41214548 (view UCSC Genome Browser custom track) | 
| Alignm length: | 163 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 51, 0 | 
| Conread position: | 256-433 | 
| Cow position: | chr6:34393716-34393543 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 52, 105 | 
| Conread position: | 257-498 | 
| Cow position: | chr6:53401071-53401303 (view UCSC Genome Browser custom track) | 
| Alignm length: | 244 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 3.99931e-42 | 
| Alignm gaps (pig, cow): | 48, 82 | 
| Conread position: | 258-508 | 
| Cow position: | chr6:60057964-60057700 (view UCSC Genome Browser custom track) | 
| Alignm length: | 265 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 7e-37 | 
| Alignm gaps (pig, cow): | 49, 0 | 
| Conread position: | 258-518 | 
| Cow position: | chr6:19508730-19508477 (view UCSC Genome Browser custom track) | 
| Alignm length: | 265 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 47, 104 | 
| Conread position: | 259-497 | 
| Cow position: | chr6:58172890-58173125 (view UCSC Genome Browser custom track) | 
| Alignm length: | 244 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 6e-36 | 
| Alignm gaps (pig, cow): | 48, 65 | 
| Conread position: | 260-433 | 
| Cow position: | chr6:23545763-23545588 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 47, 0 | 
| Conread position: | 260-511 | 
| Cow position: | chr6:55577869-55578122 (view UCSC Genome Browser custom track) | 
| Alignm length: | 255 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 47, 166 | 
| Conread position: | 260-512 | 
| Cow position: | chr6:40713796-40713543 (view UCSC Genome Browser custom track) | 
| Alignm length: | 258 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 7e-37 | 
| Alignm gaps (pig, cow): | 21, 93 | 
| Conread position: | 260-518 | 
| Cow position: | chr6:38218368-38218634 (view UCSC Genome Browser custom track) | 
| Alignm length: | 270 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 47, 12 | 
| Conread position: | 260-568 | 
| Cow position: | chr6:63272914-63272592 (view UCSC Genome Browser custom track) | 
| Alignm length: | 326 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 5e-33 | 
| Alignm gaps (pig, cow): | 46, 116 | 
| Conread position: | 261-511 | 
| Cow position: | chr6:12389803-12390055 (view UCSC Genome Browser custom track) | 
| Alignm length: | 257 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 4e-31 | 
| Alignm gaps (pig, cow): | 46, 91 | 
| Conread position: | 263-521 | 
| Cow position: | chr6:2833172-2832908 (view UCSC Genome Browser custom track) | 
| Alignm length: | 265 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 19, 0 | 
| Conread position: | 264-529 | 
| Cow position: | chr6:61489054-61489317 (view UCSC Genome Browser custom track) | 
| Alignm length: | 270 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 41, 48 | 
| Conread position: | 265-433 | 
| Cow position: | chr6:12913778-12913608 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 8e-27 | 
| Alignm gaps (pig, cow): | 42, 0 | 
| Conread position: | 265-448 | 
| Cow position: | chr6:6136597-6136781 (view UCSC Genome Browser custom track) | 
| Alignm length: | 187 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 6e-25 | 
| Alignm gaps (pig, cow): | 42, 172 | 
| Conread position: | 265-514 | 
| Cow position: | chr6:34196440-34196191 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 6e-35 | 
| Alignm gaps (pig, cow): | 45, 180 | 
| Conread position: | 265-518 | 
| Cow position: | chr6:47519759-47520013 (view UCSC Genome Browser custom track) | 
| Alignm length: | 263 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 4e-31 | 
| Alignm gaps (pig, cow): | 43, 94 | 
| Conread position: | 265-521 | 
| Cow position: | chr6:38257447-38257184 (view UCSC Genome Browser custom track) | 
| Alignm length: | 264 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 42, 0 | 
| Conread position: | 265-521 | 
| Cow position: | chr6:47387204-47387469 (view UCSC Genome Browser custom track) | 
| Alignm length: | 266 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 7e-26 | 
| Alignm gaps (pig, cow): | 42, 0 | 
| Conread position: | 265-522 | 
| Cow position: | chr6:54369188-54368933 (view UCSC Genome Browser custom track) | 
| Alignm length: | 260 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 221, 53 | 
| Conread position: | 266-613 | 
| Cow position: | chr6:7131162-7130825 (view UCSC Genome Browser custom track) | 
| Alignm length: | 353 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 9e-39 | 
| Alignm gaps (pig, cow): | 41, 168 | 
| Conread position: | 267-433 | 
| Cow position: | chr6:20951669-20951837 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 40, 0 | 
| Conread position: | 267-521 | 
| Cow position: | chr6:26696897-26696637 (view UCSC Genome Browser custom track) | 
| Alignm length: | 263 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 4e-31 | 
| Alignm gaps (pig, cow): | 39, 101 | 
| Conread position: | 268-539 | 
| Cow position: | chr6:19330043-19329762 (view UCSC Genome Browser custom track) | 
| Alignm length: | 286 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 38, 56 | 
| Conread position: | 268-589 | 
| Cow position: | chr6:62479454-62479122 (view UCSC Genome Browser custom track) | 
| Alignm length: | 337 | 
| Alignm identity: | 231 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 39, 93 | 
| Conread position: | 270-521 | 
| Cow position: | chr6:46637898-46638153 (view UCSC Genome Browser custom track) | 
| Alignm length: | 258 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 24, 36 | 
| Conread position: | 271-500 | 
| Cow position: | chr6:69500044-69500269 (view UCSC Genome Browser custom track) | 
| Alignm length: | 233 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 36, 133 | 
| Conread position: | 272-482 | 
| Cow position: | chr6:51387481-51387693 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 36, 58 | 
| Conread position: | 274-521 | 
| Cow position: | chr6:32778812-32778558 (view UCSC Genome Browser custom track) | 
| Alignm length: | 255 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 34, 0 | 
| Conread position: | 276-518 | 
| Cow position: | chr6:57119208-57118974 (view UCSC Genome Browser custom track) | 
| Alignm length: | 249 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 31, 46 | 
| Conread position: | 277-472 | 
| Cow position: | chr6:32024617-32024420 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 30, 18 | 
| Conread position: | 277-511 | 
| Cow position: | chr6:21534779-21535012 (view UCSC Genome Browser custom track) | 
| Alignm length: | 238 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 30, 161 | 
| Conread position: | 278-504 | 
| Cow position: | chr6:13597171-13596938 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 29, 0 | 
| Conread position: | 278-521 | 
| Cow position: | chr6:56808368-56808118 (view UCSC Genome Browser custom track) | 
| Alignm length: | 251 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 29, 0 | 
| Conread position: | 280-433 | 
| Cow position: | chr6:60274500-60274346 (view UCSC Genome Browser custom track) | 
| Alignm length: | 156 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 27, 88 | 
| Conread position: | 280-442 | 
| Cow position: | chr6:3591849-3592010 (view UCSC Genome Browser custom track) | 
| Alignm length: | 165 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 27, 44 | 
| Conread position: | 280-511 | 
| Cow position: | chr6:32298745-32298508 (view UCSC Genome Browser custom track) | 
| Alignm length: | 238 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 9e-29 | 
| Alignm gaps (pig, cow): | 27, 0 | 
| Conread position: | 280-512 | 
| Cow position: | chr6:34235711-34235477 (view UCSC Genome Browser custom track) | 
| Alignm length: | 238 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 30, 153 | 
| Conread position: | 280-515 | 
| Cow position: | chr6:6264369-6264603 (view UCSC Genome Browser custom track) | 
| Alignm length: | 243 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 4e-31 | 
| Alignm gaps (pig, cow): | 27, 44 | 
| Conread position: | 280-520 | 
| Cow position: | chr6:1273634-1273393 (view UCSC Genome Browser custom track) | 
| Alignm length: | 245 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 6e-25 | 
| Alignm gaps (pig, cow): | 27, 166 | 
| Conread position: | 280-521 | 
| Cow position: | chr6:44705618-44705370 (view UCSC Genome Browser custom track) | 
| Alignm length: | 249 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 27, 0 | 
| Conread position: | 282-482 | 
| Cow position: | chr6:47150504-47150706 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 23, 0 | 
| Conread position: | 282-521 | 
| Cow position: | chr6:53960286-53960040 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 25, 0 | 
| Conread position: | 283-521 | 
| Cow position: | chr6:11097686-11097927 (view UCSC Genome Browser custom track) | 
| Alignm length: | 244 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 151, 13 | 
| Conread position: | 284-512 | 
| Cow position: | chr6:7103504-7103272 (view UCSC Genome Browser custom track) | 
| Alignm length: | 237 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 82, 27 | 
| Conread position: | 284-521 | 
| Cow position: | chr6:43896945-43896701 (view UCSC Genome Browser custom track) | 
| Alignm length: | 245 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 8e-27 | 
| Alignm gaps (pig, cow): | 23, 0 | 
| Conread position: | 284-539 | 
| Cow position: | chr6:48281722-48281984 (view UCSC Genome Browser custom track) | 
| Alignm length: | 263 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 23, 0 | 
| Conread position: | 285-498 | 
| Cow position: | chr6:60473862-60474081 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 22, 0 | 
| Conread position: | 285-505 | 
| Cow position: | chr6:57149227-57149001 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 23, 91 | 
| Conread position: | 285-506 | 
| Cow position: | chr6:13603195-13603418 (view UCSC Genome Browser custom track) | 
| Alignm length: | 225 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 22, 141 | 
| Conread position: | 285-512 | 
| Cow position: | chr6:50746705-50746944 (view UCSC Genome Browser custom track) | 
| Alignm length: | 241 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 21, 118 | 
| Conread position: | 285-518 | 
| Cow position: | chr6:42961639-42961397 (view UCSC Genome Browser custom track) | 
| Alignm length: | 243 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 7e-37 | 
| Alignm gaps (pig, cow): | 17, 0 | 
| Conread position: | 285-520 | 
| Cow position: | chr6:52562440-52562202 (view UCSC Genome Browser custom track) | 
| Alignm length: | 246 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 6e-25 | 
| Alignm gaps (pig, cow): | 22, 45 | 
| Conread position: | 285-521 | 
| Cow position: | chr6:25348042-25347799 (view UCSC Genome Browser custom track) | 
| Alignm length: | 244 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 22, 0 | 
| Conread position: | 285-521 | 
| Cow position: | chr6:41798577-41798334 (view UCSC Genome Browser custom track) | 
| Alignm length: | 244 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 6e-25 | 
| Alignm gaps (pig, cow): | 17, 0 | 
| Conread position: | 285-521 | 
| Cow position: | chr6:54899831-54900074 (view UCSC Genome Browser custom track) | 
| Alignm length: | 244 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 22, 0 | 
| Conread position: | 285-521 | 
| Cow position: | chr6:62418802-62418559 (view UCSC Genome Browser custom track) | 
| Alignm length: | 246 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 22, 216 | 
| Conread position: | 285-602 | 
| Cow position: | chr6:54365595-54365278 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 9e-39 | 
| Alignm gaps (pig, cow): | 22, 93 | 
| Conread position: | 288-476 | 
| Cow position: | chr6:53799149-53798959 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 19, 104 | 
| Conread position: | 288-483 | 
| Cow position: | chr6:16352588-16352394 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 19, 84 | 
| Conread position: | 288-512 | 
| Cow position: | chr6:35471795-35471562 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 8e-38 | 
| Alignm gaps (pig, cow): | 19, 199 | 
| Conread position: | 288-519 | 
| Cow position: | chr6:53710849-53711079 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 11, 6 | 
| Conread position: | 288-521 | 
| Cow position: | chr6:59688571-59688331 (view UCSC Genome Browser custom track) | 
| Alignm length: | 244 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 19, 73 | 
| Conread position: | 289-434 | 
| Cow position: | chr6:54735472-54735617 (view UCSC Genome Browser custom track) | 
| Alignm length: | 148 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 18, 88 | 
| Conread position: | 292-497 | 
| Cow position: | chr6:42731937-42732149 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 15, 0 | 
| Conread position: | 292-502 | 
| Cow position: | chr6:35769747-35769536 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 15, 188 | 
| Conread position: | 292-521 | 
| Cow position: | chr6:43430128-43429892 (view UCSC Genome Browser custom track) | 
| Alignm length: | 237 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 15, 0 | 
| Conread position: | 293-518 | 
| Cow position: | chr6:61515461-61515228 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 17, 75 | 
| Conread position: | 295-511 | 
| Cow position: | chr6:11772171-11771951 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 139, 27 | 
| Conread position: | 295-515 | 
| Cow position: | chr6:54293849-54294068 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 5e-33 | 
| Alignm gaps (pig, cow): | 12, 142 | 
| Conread position: | 296-521 | 
| Cow position: | chr6:55289632-55289864 (view UCSC Genome Browser custom track) | 
| Alignm length: | 233 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 11, 0 | 
| Conread position: | 298-512 | 
| Cow position: | chr6:64449133-64449349 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 9, 96 | 
| Conread position: | 298-560 | 
| Cow position: | chr6:5609701-5609432 (view UCSC Genome Browser custom track) | 
| Alignm length: | 271 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 4e-31 | 
| Alignm gaps (pig, cow): | 11, 182 | 
| Conread position: | 301-557 | 
| Cow position: | chr6:36011438-36011691 (view UCSC Genome Browser custom track) | 
| Alignm length: | 264 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 37, 22 | 
| Conread position: | 304-510 | 
| Cow position: | chr6:17068071-17067863 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 17, 63 | 
| Conread position: | 304-512 | 
| Cow position: | chr6:3952274-3952475 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 55, 0 | 
| Conread position: | 306-483 | 
| Cow position: | chr6:11829917-11830100 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 9e-29 | 
| Alignm gaps (pig, cow): | 129, 0 | 
| Conread position: | 306-498 | 
| Cow position: | chr6:65676008-65676204 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 135, 0 | 
| Conread position: | 306-511 | 
| Cow position: | chr6:21230720-21230927 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 129, 16 | 
| Conread position: | 306-511 | 
| Cow position: | chr6:21254793-21255003 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 128, 0 | 
| Conread position: | 306-517 | 
| Cow position: | chr6:3719257-3719043 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 54, 178 | 
| Conread position: | 306-520 | 
| Cow position: | chr6:51246702-51246918 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 159, 143 | 
| Conread position: | 306-521 | 
| Cow position: | chr6:22788206-22788426 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 128, 0 | 
| Conread position: | 306-521 | 
| Cow position: | chr6:65839123-65838903 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 128, 0 | 
| Conread position: | 306-537 | 
| Cow position: | chr6:57857631-57857866 (view UCSC Genome Browser custom track) | 
| Alignm length: | 238 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 54, 74 | 
| Conread position: | 309-512 | 
| Cow position: | chr6:54132573-54132774 (view UCSC Genome Browser custom track) | 
| Alignm length: | 205 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 6e-35 | 
| Alignm gaps (pig, cow): | 182, 11 | 
| Conread position: | 309-523 | 
| Cow position: | chr6:20329775-20329992 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 125, 168 | 
| Conread position: | 310-511 | 
| Cow position: | chr6:1002479-1002277 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 52, 39 | 
| Conread position: | 310-512 | 
| Cow position: | chr6:38853903-38853699 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 7e-37 | 
| Alignm gaps (pig, cow): | 124, 172 | 
| Conread position: | 312-512 | 
| Cow position: | chr6:54991235-54991046 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 129, 47 | 
| Conread position: | 314-512 | 
| Cow position: | chr6:26915089-26915287 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 111, 135 | 
| Conread position: | 314-512 | 
| Cow position: | chr6:61113509-61113714 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 121, 0 | 
| Conread position: | 314-518 | 
| Cow position: | chr6:9736880-9736681 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 91, 46 | 
| Conread position: | 315-466 | 
| Cow position: | chr6:41375513-41375667 (view UCSC Genome Browser custom track) | 
| Alignm length: | 157 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 59, 37 | 
| Conread position: | 316-512 | 
| Cow position: | chr6:20098203-20098007 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 174, 162 | 
| Conread position: | 316-523 | 
| Cow position: | chr6:51398562-51398771 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 175, 0 | 
| Conread position: | 317-585 | 
| Cow position: | chr6:46860403-46860133 (view UCSC Genome Browser custom track) | 
| Alignm length: | 280 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 117, 19 | 
| Conread position: | 318-483 | 
| Cow position: | chr6:62967124-62966965 (view UCSC Genome Browser custom track) | 
| Alignm length: | 167 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 52, 107 | 
| Conread position: | 318-511 | 
| Cow position: | chr6:13040215-13040413 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 7e-26 | 
| Alignm gaps (pig, cow): | 52, 165 | 
| Conread position: | 318-512 | 
| Cow position: | chr6:61978418-61978217 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 6e-25 | 
| Alignm gaps (pig, cow): | 110, 157 | 
| Conread position: | 319-562 | 
| Cow position: | chr6:48344093-48344348 (view UCSC Genome Browser custom track) | 
| Alignm length: | 258 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 116, 9 | 
| Conread position: | 321-480 | 
| Cow position: | chr6:1891079-1890919 (view UCSC Genome Browser custom track) | 
| Alignm length: | 162 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 127, 45 | 
| Conread position: | 321-518 | 
| Cow position: | chr6:130398-130198 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 7e-37 | 
| Alignm gaps (pig, cow): | 113, 45 | 
| Conread position: | 326-511 | 
| Cow position: | chr6:59256226-59256411 (view UCSC Genome Browser custom track) | 
| Alignm length: | 187 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 150, 123 | 
| Conread position: | 326-512 | 
| Cow position: | chr6:3929094-3929275 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 165, 12 | 
| Conread position: | 326-523 | 
| Cow position: | chr6:54885142-54884944 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 6e-36 | 
| Alignm gaps (pig, cow): | 152, 193 | 
| Conread position: | 327-476 | 
| Cow position: | chr6:16288646-16288502 (view UCSC Genome Browser custom track) | 
| Alignm length: | 151 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 107, 39 | 
| Conread position: | 327-476 | 
| Cow position: | chr6:31048734-31048589 (view UCSC Genome Browser custom track) | 
| Alignm length: | 151 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 107, 117 | 
| Conread position: | 327-482 | 
| Cow position: | chr6:9026289-9026444 (view UCSC Genome Browser custom track) | 
| Alignm length: | 156 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 8e-27 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 327-495 | 
| Cow position: | chr6:16103430-16103263 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 98, 0 | 
| Conread position: | 327-514 | 
| Cow position: | chr6:14201470-14201664 (view UCSC Genome Browser custom track) | 
| Alignm length: | 196 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 116, 191 | 
| Conread position: | 327-518 | 
| Cow position: | chr6:4383265-4383449 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 165, 46 | 
| Conread position: | 327-518 | 
| Cow position: | chr6:44194773-44194579 (view UCSC Genome Browser custom track) | 
| Alignm length: | 196 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 101, 155 | 
| Conread position: | 327-518 | 
| Cow position: | chr6:60350527-60350332 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 108, 155 | 
| Conread position: | 327-562 | 
| Cow position: | chr6:68049208-68049448 (view UCSC Genome Browser custom track) | 
| Alignm length: | 242 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 152, 39 | 
| Conread position: | 327-619 | 
| Cow position: | chr6:67950731-67951024 (view UCSC Genome Browser custom track) | 
| Alignm length: | 304 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 164, 107 | 
| Conread position: | 328-482 | 
| Cow position: | chr6:14289561-14289411 (view UCSC Genome Browser custom track) | 
| Alignm length: | 155 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 107, 0 | 
| Conread position: | 328-491 | 
| Cow position: | chr6:54490967-54490809 (view UCSC Genome Browser custom track) | 
| Alignm length: | 164 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 6e-25 | 
| Alignm gaps (pig, cow): | 108, 0 | 
| Conread position: | 328-510 | 
| Cow position: | chr6:21869872-21869691 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 163, 107 | 
| Conread position: | 328-512 | 
| Cow position: | chr6:56041849-56041666 (view UCSC Genome Browser custom track) | 
| Alignm length: | 187 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 156, 118 | 
| Conread position: | 328-515 | 
| Cow position: | chr6:53460798-53460612 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 4e-31 | 
| Alignm gaps (pig, cow): | 164, 41 | 
| Conread position: | 328-518 | 
| Cow position: | chr6:66874135-66874313 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 164, 88 | 
| Conread position: | 328-533 | 
| Cow position: | chr6:52025882-52025677 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 12, 26 | 
| Conread position: | 328-568 | 
| Cow position: | chr6:49685358-49685604 (view UCSC Genome Browser custom track) | 
| Alignm length: | 252 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 153, 141 | 
| Conread position: | 328-568 | 
| Cow position: | chr6:67304575-67304824 (view UCSC Genome Browser custom track) | 
| Alignm length: | 252 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 107, 31 | 
| Conread position: | 328-570 | 
| Cow position: | chr6:51581486-51581237 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 21, 0 | 
| Conread position: | 328-570 | 
| Cow position: | chr6:66433721-66433966 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 155, 106 | 
| Conread position: | 328-589 | 
| Cow position: | chr6:36202601-36202859 (view UCSC Genome Browser custom track) | 
| Alignm length: | 263 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 162, 150 | 
| Conread position: | 328-627 | 
| Cow position: | chr6:37148970-37149266 (view UCSC Genome Browser custom track) | 
| Alignm length: | 313 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 15, 33 | 
| Conread position: | 330-512 | 
| Cow position: | chr6:21542095-21542277 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 161, 147 | 
| Conread position: | 330-519 | 
| Cow position: | chr6:19401637-19401820 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 8e-28 | 
| Alignm gaps (pig, cow): | 99, 0 | 
| Conread position: | 330-519 | 
| Cow position: | chr6:20605709-20605900 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 94, 40 | 
| Conread position: | 330-523 | 
| Cow position: | chr6:60239613-60239422 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 106, 27 | 
| Conread position: | 331-510 | 
| Cow position: | chr6:388947-389125 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 156, 65 | 
| Conread position: | 331-518 | 
| Cow position: | chr6:7824539-7824726 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 104, 28 | 
| Conread position: | 331-518 | 
| Cow position: | chr6:59302048-59301857 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 4e-31 | 
| Alignm gaps (pig, cow): | 100, 12 | 
| Conread position: | 331-519 | 
| Cow position: | chr6:45160515-45160330 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 5e-34 | 
| Alignm gaps (pig, cow): | 153, 29 | 
| Conread position: | 332-566 | 
| Cow position: | chr6:41733404-41733644 (view UCSC Genome Browser custom track) | 
| Alignm length: | 244 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 154, 103 | 
| Conread position: | 333-518 | 
| Cow position: | chr6:38207717-38207528 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 83, 33 | 
| Conread position: | 333-518 | 
| Cow position: | chr6:38614602-38614779 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 99, 0 | 
| Conread position: | 334-512 | 
| Cow position: | chr6:14949702-14949521 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 101, 160 | 
| Conread position: | 334-512 | 
| Cow position: | chr6:53651818-53651999 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 8e-27 | 
| Alignm gaps (pig, cow): | 6, 147 | 
| Conread position: | 334-537 | 
| Cow position: | chr6:39994682-39994470 (view UCSC Genome Browser custom track) | 
| Alignm length: | 214 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 8e-28 | 
| Alignm gaps (pig, cow): | 99, 148 | 
| Conread position: | 335-476 | 
| Cow position: | chr6:10225896-10225762 (view UCSC Genome Browser custom track) | 
| Alignm length: | 142 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 35, 0 | 
| Conread position: | 335-498 | 
| Cow position: | chr6:21184736-21184901 (view UCSC Genome Browser custom track) | 
| Alignm length: | 167 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 92, 145 | 
| Conread position: | 335-515 | 
| Cow position: | chr6:34031448-34031623 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 152, 89 | 
| Conread position: | 335-518 | 
| Cow position: | chr6:899504-899327 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 156, 50 | 
| Conread position: | 335-567 | 
| Cow position: | chr6:5462268-5462040 (view UCSC Genome Browser custom track) | 
| Alignm length: | 237 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 9e-29 | 
| Alignm gaps (pig, cow): | 143, 35 | 
| Conread position: | 336-512 | 
| Cow position: | chr6:55936195-55936020 (view UCSC Genome Browser custom track) | 
| Alignm length: | 178 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 162, 120 | 
| Conread position: | 336-518 | 
| Cow position: | chr6:54430600-54430789 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 8e-27 | 
| Alignm gaps (pig, cow): | 106, 0 | 
| Conread position: | 336-560 | 
| Cow position: | chr6:23248182-23247949 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 5e-33 | 
| Alignm gaps (pig, cow): | 99, 147 | 
| Conread position: | 337-498 | 
| Cow position: | chr6:15923215-15923056 (view UCSC Genome Browser custom track) | 
| Alignm length: | 162 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 29, 0 | 
| Conread position: | 337-515 | 
| Cow position: | chr6:242596-242770 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 149, 87 | 
| Conread position: | 338-512 | 
| Cow position: | chr6:6460325-6460500 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 7e-26 | 
| Alignm gaps (pig, cow): | 104, 22 | 
| Conread position: | 338-518 | 
| Cow position: | chr6:60442202-60442382 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 6e-25 | 
| Alignm gaps (pig, cow): | 139, 32 | 
| Conread position: | 338-564 | 
| Cow position: | chr6:21110752-21110970 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 9e-29 | 
| Alignm gaps (pig, cow): | 28, 97 | 
| Conread position: | 338-613 | 
| Cow position: | chr6:8965873-8966160 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 97, 32 | 
| Conread position: | 338-627 | 
| Cow position: | chr6:50090423-50090719 (view UCSC Genome Browser custom track) | 
| Alignm length: | 298 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 33, 195 | 
| Conread position: | 340-512 | 
| Cow position: | chr6:17997530-17997357 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 8e-28 | 
| Alignm gaps (pig, cow): | 151, 0 | 
| Conread position: | 340-527 | 
| Cow position: | chr6:7539358-7539547 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 26, 128 | 
| Conread position: | 340-559 | 
| Cow position: | chr6:30786363-30786141 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 167, 92 | 
| Conread position: | 341-512 | 
| Cow position: | chr6:59620455-59620628 (view UCSC Genome Browser custom track) | 
| Alignm length: | 175 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 7e-26 | 
| Alignm gaps (pig, cow): | 141, 166 | 
| Conread position: | 342-512 | 
| Cow position: | chr6:62324777-62324950 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 24, 0 | 
| Conread position: | 342-565 | 
| Cow position: | chr6:6098495-6098266 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 149, 108 | 
| Conread position: | 343-510 | 
| Cow position: | chr6:2896539-2896711 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 90, 69 | 
| Conread position: | 343-568 | 
| Cow position: | chr6:24515405-24515179 (view UCSC Genome Browser custom track) | 
| Alignm length: | 232 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 141, 149 | 
| Conread position: | 346-625 | 
| Cow position: | chr6:23532454-23532729 (view UCSC Genome Browser custom track) | 
| Alignm length: | 286 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 83, 118 | 
| Conread position: | 347-518 | 
| Cow position: | chr6:7989621-7989446 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 7e-26 | 
| Alignm gaps (pig, cow): | 80, 32 | 
| Conread position: | 347-518 | 
| Cow position: | chr6:54864874-54864707 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 143, 19 | 
| Conread position: | 347-559 | 
| Cow position: | chr6:21231329-21231537 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 143, 5 | 
| Conread position: | 348-518 | 
| Cow position: | chr6:19695600-19695770 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 6e-25 | 
| Alignm gaps (pig, cow): | 122, 18 | 
| Conread position: | 348-518 | 
| Cow position: | chr6:61137158-61137337 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 18, 152 | 
| Conread position: | 349-518 | 
| Cow position: | chr6:38641292-38641457 (view UCSC Genome Browser custom track) | 
| Alignm length: | 170 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 86, 0 | 
| Conread position: | 351-513 | 
| Cow position: | chr6:51463820-51463653 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 83, 131 | 
| Conread position: | 352-512 | 
| Cow position: | chr6:66131105-66131263 (view UCSC Genome Browser custom track) | 
| Alignm length: | 164 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 126, 72 | 
| Conread position: | 352-518 | 
| Cow position: | chr6:48425524-48425358 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 126, 84 | 
| Conread position: | 354-518 | 
| Cow position: | chr6:46245524-46245354 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 79, 0 | 
| Conread position: | 356-518 | 
| Cow position: | chr6:8788236-8788074 (view UCSC Genome Browser custom track) | 
| Alignm length: | 164 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 6e-25 | 
| Alignm gaps (pig, cow): | 137, 93 | 
| Conread position: | 360-502 | 
| Cow position: | chr6:21812535-21812678 (view UCSC Genome Browser custom track) | 
| Alignm length: | 144 | 
| Alignm identity: | 106 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 131, 0 | 
| Conread position: | 360-518 | 
| Cow position: | chr6:16423504-16423663 (view UCSC Genome Browser custom track) | 
| Alignm length: | 162 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 74, 99 | 
| Conread position: | 371-514 | 
| Cow position: | chr6:37603339-37603482 (view UCSC Genome Browser custom track) | 
| Alignm length: | 144 | 
| Alignm identity: | 106 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 379-515 | 
| Cow position: | chr6:37783238-37783380 (view UCSC Genome Browser custom track) | 
| Alignm length: | 144 | 
| Alignm identity: | 111 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 29, 65 | 
| Conread position: | 394-518 | 
| Cow position: | chr6:12543094-12542970 (view UCSC Genome Browser custom track) | 
| Alignm length: | 126 | 
| Alignm identity: | 97 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 99, 84 | 
Show alignments to all cow chromosomes.
