Cow genome map

Conread name: Ss1.1-Pig4-TMW8053G20.3

Conread position: 126-345
Cow position: chr6:9737852-9737635 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 135-293
Cow position: chr6:48658004-48657852 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 141-328
Cow position: chr6:11869509-11869322 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 149
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 141-329
Cow position: chr6:16049866-16049682 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 145
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 37, 0

Conread position: 141-338
Cow position: chr6:1637530-1637334 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 9, 25

Conread position: 142-329
Cow position: chr6:11389186-11389000 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 150
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 36, 0

Conread position: 142-329
Cow position: chr6:44598623-44598437 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 150
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 36, 0

Conread position: 142-338
Cow position: chr6:1274426-1274234 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 152
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 163, 36

Conread position: 142-338
Cow position: chr6:23879631-23879436 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 152
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 36, 0

Conread position: 142-338
Cow position: chr6:51150370-51150565 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 160
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 142-338
Cow position: chr6:53739719-53739914 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 151
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 47, 36

Conread position: 142-338
Cow position: chr6:57308652-57308847 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 36, 0

Conread position: 142-345
Cow position: chr6:10266699-10266503 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 152
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 36, 0

Conread position: 142-360
Cow position: chr6:63040905-63040685 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 167
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 189, 46

Conread position: 144-334
Cow position: chr6:14199476-14199662 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 150
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 19, 0

Conread position: 144-338
Cow position: chr6:47039781-47039588 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 150
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 34, 0

Conread position: 146-346
Cow position: chr6:39099861-39099664 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 142
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 118, 6

Conread position: 149-338
Cow position: chr6:20328789-20328976 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 150
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 50, 0

Conread position: 149-338
Cow position: chr6:33296685-33296868 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 133
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 149-351
Cow position: chr6:24631824-24631618 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 144
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 60, 49

Conread position: 152-305
Cow position: chr6:45065723-45065574 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 152-336
Cow position: chr6:14897620-14897803 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 140
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 32, 0

Conread position: 152-338
Cow position: chr6:34030696-34030879 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 140
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 13, 0

Conread position: 152-338
Cow position: chr6:51191065-51191250 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 131
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 69, 16

Conread position: 152-351
Cow position: chr6:33949725-33949528 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 137
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 153-282
Cow position: chr6:39999020-39998893 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 153-300
Cow position: chr6:182114-181966 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 122
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 94, 25

Conread position: 153-305
Cow position: chr6:52697028-52697181 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 68, 25

Conread position: 153-332
Cow position: chr6:41410040-41410218 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 142
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 42, 25

Conread position: 153-332
Cow position: chr6:51674205-51674384 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 147
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 109, 25

Conread position: 153-335
Cow position: chr6:17049812-17049994 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 148
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 43, 142

Conread position: 153-338
Cow position: chr6:706437-706618 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 147
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 25, 0

Conread position: 153-338
Cow position: chr6:2186343-2186159 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 148
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 25, 0

Conread position: 153-338
Cow position: chr6:3484980-3484797 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 153
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 25, 0

Conread position: 153-338
Cow position: chr6:8754016-8753835 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 155
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 153-338
Cow position: chr6:16418252-16418068 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 147
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 25, 0

Conread position: 153-338
Cow position: chr6:17111727-17111543 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 150
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 25, 0

Conread position: 153-338
Cow position: chr6:17121828-17122012 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 149
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 25, 0

Conread position: 153-338
Cow position: chr6:25218220-25218403 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 144
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 25, 0

Conread position: 153-338
Cow position: chr6:28112399-28112215 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 148
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 25, 0

Conread position: 153-338
Cow position: chr6:36531713-36531898 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 149
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 153-338
Cow position: chr6:40550261-40550078 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 149
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 151, 25

Conread position: 153-338
Cow position: chr6:43789929-43789745 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 154
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 153-338
Cow position: chr6:44017389-44017205 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 145
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 25, 0

Conread position: 153-345
Cow position: chr6:24125964-24125777 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 146
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 25, 0

Conread position: 155-338
Cow position: chr6:58031217-58031394 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 142
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 154, 23

Conread position: 156-326
Cow position: chr6:50526950-50527122 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 55, 0

Conread position: 156-327
Cow position: chr6:39957513-39957683 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 39, 28

Conread position: 156-329
Cow position: chr6:28674970-28675142 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 148
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 156-338
Cow position: chr6:17757346-17757524 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 130
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 156-343
Cow position: chr6:4681051-4681236 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 146
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 22, 0

Conread position: 157-302
Cow position: chr6:58914895-58914751 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 83, 21

Conread position: 157-338
Cow position: chr6:9839687-9839506 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 141
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 11, 33

Conread position: 157-343
Cow position: chr6:6839017-6839200 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 21, 0

Conread position: 158-273
Cow position: chr6:39997641-39997527 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 37, 20

Conread position: 158-273
Cow position: chr6:60332789-60332903 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 158-309
Cow position: chr6:47988370-47988521 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 125
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 44, 20

Conread position: 158-311
Cow position: chr6:7175208-7175064 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 158-313
Cow position: chr6:11780041-11779885 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 127
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 95, 26

Conread position: 158-313
Cow position: chr6:27475860-27476014 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 125
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 20, 0

Conread position: 158-315
Cow position: chr6:29430275-29430431 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 26, 0

Conread position: 158-322
Cow position: chr6:26697632-26697469 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 34, 20

Conread position: 158-327
Cow position: chr6:3574451-3574616 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 132
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 20, 0

Conread position: 158-327
Cow position: chr6:60813987-60813822 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 122
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 19, 0

Conread position: 158-328
Cow position: chr6:9468973-9469140 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 136
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 5, 29

Conread position: 158-329
Cow position: chr6:40251356-40251189 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 140
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 20, 0

Conread position: 158-329
Cow position: chr6:40278495-40278666 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 145
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 152, 18

Conread position: 158-329
Cow position: chr6:52557179-52557009 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 20, 0

Conread position: 158-332
Cow position: chr6:8145583-8145408 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 37, 0

Conread position: 158-334
Cow position: chr6:8205631-8205806 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 144
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 20, 0

Conread position: 158-335
Cow position: chr6:27858901-27859076 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 139
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 20, 0

Conread position: 158-335
Cow position: chr6:41192791-41192967 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 141
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 20, 0

Conread position: 158-336
Cow position: chr6:66234787-66234960 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 20, 0

Conread position: 158-338
Cow position: chr6:1096289-1096111 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 164, 18

Conread position: 158-338
Cow position: chr6:1817569-1817391 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 144
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 25, 0

Conread position: 158-338
Cow position: chr6:1834439-1834618 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 144
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 26, 0

Conread position: 158-338
Cow position: chr6:1887348-1887176 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 139
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 10, 31

Conread position: 158-338
Cow position: chr6:3272038-3271858 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 144
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 149, 25

Conread position: 158-338
Cow position: chr6:3886061-3885885 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 142
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 37, 20

Conread position: 158-338
Cow position: chr6:5946331-5946152 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 145
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 20, 0

Conread position: 158-338
Cow position: chr6:7112271-7112091 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 146
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 11, 21

Conread position: 158-338
Cow position: chr6:8210287-8210108 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 140
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 37, 0

Conread position: 158-338
Cow position: chr6:11193137-11192957 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 142
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 96, 20

Conread position: 158-338
Cow position: chr6:11721764-11721593 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 58, 0

Conread position: 158-338
Cow position: chr6:15275796-15275617 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 150
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 158-338
Cow position: chr6:16593392-16593571 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 148
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 20, 0

Conread position: 158-338
Cow position: chr6:17415201-17415026 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 148
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 17, 0

Conread position: 158-338
Cow position: chr6:20451403-20451581 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 144
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 20, 0

Conread position: 158-338
Cow position: chr6:20552799-20552618 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 149
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 37, 20

Conread position: 158-338
Cow position: chr6:28476463-28476641 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 139
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 20, 0

Conread position: 158-338
Cow position: chr6:34405771-34405950 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 143
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 20, 0

Conread position: 158-338
Cow position: chr6:35884252-35884430 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 128
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 41, 46

Conread position: 158-338
Cow position: chr6:38873084-38872905 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 148
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 20, 0

Conread position: 158-338
Cow position: chr6:39331089-39330909 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 150
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 95, 20

Conread position: 158-338
Cow position: chr6:40358435-40358255 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 145
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 39, 20

Conread position: 158-338
Cow position: chr6:40813805-40813984 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 150
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 158-338
Cow position: chr6:46763962-46763783 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 141
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 31, 20

Conread position: 158-338
Cow position: chr6:47383029-47383208 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 147
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 20, 0

Conread position: 158-338
Cow position: chr6:47574233-47574408 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 141
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 20, 0

Conread position: 158-338
Cow position: chr6:49391897-49391715 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 28, 0

Conread position: 158-338
Cow position: chr6:50571635-50571814 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 150
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 158-338
Cow position: chr6:51718001-51718179 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 149
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 20, 0

Conread position: 158-338
Cow position: chr6:51733525-51733704 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 145
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 20, 0

Conread position: 158-338
Cow position: chr6:52001672-52001849 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 20, 0

Conread position: 158-338
Cow position: chr6:54358081-54357908 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 130
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 20, 0

Conread position: 158-338
Cow position: chr6:54472209-54472029 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 144
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 158-338
Cow position: chr6:55538827-55538651 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 142
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 20, 0

Conread position: 158-338
Cow position: chr6:60876740-60876918 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 153
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 158-345
Cow position: chr6:24242731-24242915 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 153
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 20, 0

Conread position: 158-345
Cow position: chr6:47977377-47977560 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 147
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 62, 68

Conread position: 158-346
Cow position: chr6:38797589-38797769 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 20, 0

Conread position: 158-351
Cow position: chr6:24623698-24623510 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 139
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 26, 0

Conread position: 158-351
Cow position: chr6:58036727-58036919 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 141
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 26, 0

Conread position: 158-369
Cow position: chr6:32427574-32427776 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 149
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 20, 0

Conread position: 158-372
Cow position: chr6:24966086-24965875 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 153
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 179, 20

Conread position: 158-378
Cow position: chr6:55169917-55170133 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 163
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 146, 20

Conread position: 159-293
Cow position: chr6:15480996-15481133 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 21, 112

Conread position: 159-329
Cow position: chr6:61549282-61549113 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 145
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 159-338
Cow position: chr6:2110964-2110792 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 144
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 10, 20

Conread position: 162-338
Cow position: chr6:2606907-2607080 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 140
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 52, 0

Conread position: 162-345
Cow position: chr6:6119555-6119376 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 145
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 59, 0

Conread position: 163-333
Cow position: chr6:64888406-64888571 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 163-345
Cow position: chr6:51877203-51877384 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 146
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 5, 16

Conread position: 164-331
Cow position: chr6:6039272-6039432 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 164-332
Cow position: chr6:65847926-65847756 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 45, 19

Conread position: 164-338
Cow position: chr6:46570428-46570601 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 138
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 31, 0

Conread position: 164-338
Cow position: chr6:55903538-55903712 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 139
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 164-338
Cow position: chr6:59596702-59596878 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 136
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 38, 14

Conread position: 164-345
Cow position: chr6:61632295-61632117 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 140
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 31, 135

Conread position: 164-377
Cow position: chr6:26614501-26614714 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 142
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 31, 95

Conread position: 165-266
Cow position: chr6:41470510-41470410 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 165-270
Cow position: chr6:21856924-21856820 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 13, 0

Conread position: 165-273
Cow position: chr6:55041720-55041613 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 93
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 30, 13

Conread position: 165-273
Cow position: chr6:56442025-56441917 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 89, 13

Conread position: 165-273
Cow position: chr6:65819131-65819024 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 93
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 19, 0

Conread position: 165-282
Cow position: chr6:41231934-41232049 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 13, 0

Conread position: 165-295
Cow position: chr6:14839730-14839600 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 106
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 165-305
Cow position: chr6:6705784-6705922 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 105
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 165-306
Cow position: chr6:53133515-53133375 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 13, 0

Conread position: 165-308
Cow position: chr6:53212000-53211860 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 38, 22

Conread position: 165-313
Cow position: chr6:32271758-32271612 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 118
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 8, 0

Conread position: 165-313
Cow position: chr6:55946583-55946437 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 30, 19

Conread position: 165-314
Cow position: chr6:23889642-23889495 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 13, 0

Conread position: 165-314
Cow position: chr6:24583951-24583805 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 13, 0

Conread position: 165-316
Cow position: chr6:42988343-42988196 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 121
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 30, 13

Conread position: 165-319
Cow position: chr6:2089720-2089873 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 126
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 13, 0

Conread position: 165-323
Cow position: chr6:55386902-55387059 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 30, 60

Conread position: 165-324
Cow position: chr6:2545641-2545799 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 125
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 19, 0

Conread position: 165-324
Cow position: chr6:17344650-17344808 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 128
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 13, 0

Conread position: 165-325
Cow position: chr6:42761224-42761065 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 140
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 165-326
Cow position: chr6:54491486-54491328 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 125
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 13, 0

Conread position: 165-327
Cow position: chr6:1245470-1245309 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 139
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 13, 0

Conread position: 165-327
Cow position: chr6:14928902-14929059 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 133
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 12, 0

Conread position: 165-327
Cow position: chr6:15991495-15991331 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 129
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 14, 0

Conread position: 165-327
Cow position: chr6:16645335-16645488 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 13, 0

Conread position: 165-327
Cow position: chr6:17932383-17932545 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 119
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 75, 19

Conread position: 165-327
Cow position: chr6:32262912-32262754 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 165-327
Cow position: chr6:34273415-34273256 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 61, 0

Conread position: 165-327
Cow position: chr6:55239141-55239302 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 139
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 13, 0

Conread position: 165-327
Cow position: chr6:57857221-57857382 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 13, 0

Conread position: 165-328
Cow position: chr6:19719020-19719180 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 137
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 13, 0

Conread position: 165-328
Cow position: chr6:58951041-58950877 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 131
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 15, 144

Conread position: 165-329
Cow position: chr6:76990-76827 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 138
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 13, 0

Conread position: 165-329
Cow position: chr6:7448946-7449109 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 136
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 13, 0

Conread position: 165-329
Cow position: chr6:7467200-7467037 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 143
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 165-329
Cow position: chr6:9234962-9235126 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 140
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 165-329
Cow position: chr6:13307947-13307784 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 138
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 13, 0

Conread position: 165-329
Cow position: chr6:19706879-19707043 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 139
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 165-329
Cow position: chr6:20515029-20515189 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 132
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 13, 0

Conread position: 165-329
Cow position: chr6:22737255-22737092 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 138
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 13, 0

Conread position: 165-329
Cow position: chr6:25436315-25436152 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 144
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 165-329
Cow position: chr6:26829978-26830141 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 140
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 13, 0

Conread position: 165-329
Cow position: chr6:28184869-28184707 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 140
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 12, 0

Conread position: 165-329
Cow position: chr6:29085694-29085858 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 127
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 139, 19

Conread position: 165-329
Cow position: chr6:30704826-30704989 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 144
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 165-329
Cow position: chr6:33808983-33808820 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 143
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 165-329
Cow position: chr6:33884633-33884469 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 140
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 132, 13

Conread position: 165-329
Cow position: chr6:34017271-34017110 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 138
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 12, 0

Conread position: 165-329
Cow position: chr6:35248151-35248308 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 13, 0

Conread position: 165-329
Cow position: chr6:36901461-36901624 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 138
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 13, 0

Conread position: 165-329
Cow position: chr6:41823386-41823223 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 143
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 165-329
Cow position: chr6:42897638-42897804 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 140
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 77, 0

Conread position: 165-329
Cow position: chr6:45479637-45479474 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 144
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 165-329
Cow position: chr6:45723674-45723511 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 142
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 165-329
Cow position: chr6:46948266-46948429 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 136
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 13, 0

Conread position: 165-329
Cow position: chr6:51869388-51869551 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 141
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 13, 0

Conread position: 165-329
Cow position: chr6:54979078-54978915 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 143
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 165-329
Cow position: chr6:55361344-55361181 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 143
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 165-329
Cow position: chr6:57329729-57329892 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 144
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 165-329
Cow position: chr6:62665226-62665389 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 141
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 13, 0

Conread position: 165-330
Cow position: chr6:24988492-24988655 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 135
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 13, 0

Conread position: 165-332
Cow position: chr6:6278238-6278397 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 165-332
Cow position: chr6:40496880-40497043 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 120
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 165-333
Cow position: chr6:33451278-33451439 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 13, 0

Conread position: 165-334
Cow position: chr6:11169024-11169190 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 79, 13

Conread position: 165-334
Cow position: chr6:11289016-11288849 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 140
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 34, 130

Conread position: 165-335
Cow position: chr6:6100700-6100531 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 139
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 13, 0

Conread position: 165-335
Cow position: chr6:21832209-21832042 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 43, 13

Conread position: 165-335
Cow position: chr6:33466408-33466577 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 139
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 13, 0

Conread position: 165-335
Cow position: chr6:39136949-39137111 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 136
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 13, 0

Conread position: 165-335
Cow position: chr6:49444566-49444736 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 140, 13

Conread position: 165-336
Cow position: chr6:54140162-54139993 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 123
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 146, 83

Conread position: 165-338
Cow position: chr6:478997-479169 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 144
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 13, 0

Conread position: 165-338
Cow position: chr6:2087968-2088134 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 30, 13

Conread position: 165-338
Cow position: chr6:3445363-3445191 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 141
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 30, 13

Conread position: 165-338
Cow position: chr6:6471469-6471296 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 138
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 165-338
Cow position: chr6:8535347-8535176 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 145
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 13, 0

Conread position: 165-338
Cow position: chr6:9733527-9733356 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 30, 18

Conread position: 165-338
Cow position: chr6:9751744-9751575 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 134
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 13, 0

Conread position: 165-338
Cow position: chr6:10598439-10598608 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 143
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 13, 0

Conread position: 165-338
Cow position: chr6:10695172-10695337 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 139
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 13, 0

Conread position: 165-338
Cow position: chr6:12927019-12927191 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 143
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 13, 0

Conread position: 165-338
Cow position: chr6:14759076-14758906 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 18, 83

Conread position: 165-338
Cow position: chr6:15137722-15137550 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 143
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 13, 0

Conread position: 165-338
Cow position: chr6:15923908-15923736 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 140
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 13, 0

Conread position: 165-338
Cow position: chr6:16625242-16625414 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 141, 13

Conread position: 165-338
Cow position: chr6:17556693-17556865 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 132
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 52, 0

Conread position: 165-338
Cow position: chr6:24045101-24044929 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 19, 0

Conread position: 165-338
Cow position: chr6:27365617-27365789 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 64, 0

Conread position: 165-338
Cow position: chr6:28980091-28979920 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 144
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 36, 13

Conread position: 165-338
Cow position: chr6:29484425-29484597 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 141
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 13, 0

Conread position: 165-338
Cow position: chr6:32211317-32211149 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 145
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 13, 0

Conread position: 165-338
Cow position: chr6:33896197-33896033 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 165-338
Cow position: chr6:34075319-34075493 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 140
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 105, 0

Conread position: 165-338
Cow position: chr6:34843240-34843068 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 143
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 13, 0

Conread position: 165-338
Cow position: chr6:35873281-35873112 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 144
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 110, 13

Conread position: 165-338
Cow position: chr6:42564992-42565161 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 134
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 13, 0

Conread position: 165-338
Cow position: chr6:45666483-45666314 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 142
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 13, 0

Conread position: 165-338
Cow position: chr6:46225514-46225342 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 142
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 13, 0

Conread position: 165-338
Cow position: chr6:48579269-48579100 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 13, 0

Conread position: 165-338
Cow position: chr6:49411372-49411203 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 137
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 89, 13

Conread position: 165-338
Cow position: chr6:53461719-53461548 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 19, 0

Conread position: 165-338
Cow position: chr6:65016590-65016419 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 135
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 13, 0

Conread position: 165-338
Cow position: chr6:65921304-65921132 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 138
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 13, 0

Conread position: 165-338
Cow position: chr6:65930677-65930844 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 136
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 12, 0

Conread position: 165-338
Cow position: chr6:67553683-67553855 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 142
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 13, 0

Conread position: 165-343
Cow position: chr6:16737324-16737501 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 142
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 11, 0

Conread position: 165-343
Cow position: chr6:28107878-28107704 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 11, 0

Conread position: 165-343
Cow position: chr6:39301668-39301486 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 59, 0

Conread position: 165-345
Cow position: chr6:224047-223870 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 137
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 12, 0

Conread position: 165-345
Cow position: chr6:366517-366695 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 138
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 13, 0

Conread position: 165-345
Cow position: chr6:539588-539764 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 143
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 13, 0

Conread position: 165-345
Cow position: chr6:7216242-7216414 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 147
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 13, 0

Conread position: 165-345
Cow position: chr6:13740999-13741177 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 98, 0

Conread position: 165-345
Cow position: chr6:19059723-19059902 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 146
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 114, 13

Conread position: 165-345
Cow position: chr6:28978046-28977871 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 149
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 30, 13

Conread position: 165-345
Cow position: chr6:32420392-32420569 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 143
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 8, 0

Conread position: 165-345
Cow position: chr6:33921947-33921772 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 147
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 13, 0

Conread position: 165-345
Cow position: chr6:46293028-46292850 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 140
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 13, 0

Conread position: 165-345
Cow position: chr6:47539829-47540003 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 141
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 13, 0

Conread position: 165-345
Cow position: chr6:48568040-48567863 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 138
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 13, 0

Conread position: 165-345
Cow position: chr6:54429134-54429316 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 143
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 39, 12

Conread position: 165-345
Cow position: chr6:54865893-54865714 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 151
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 0

Conread position: 165-346
Cow position: chr6:7175820-7175641 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 139
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 114, 0

Conread position: 165-347
Cow position: chr6:43393348-43393527 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 139
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 161, 10

Conread position: 165-350
Cow position: chr6:34476304-34476121 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 145
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 13, 0

Conread position: 165-350
Cow position: chr6:42267168-42267350 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 148
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 13, 0

Conread position: 165-351
Cow position: chr6:3118944-3118753 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 144
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 48, 0

Conread position: 165-351
Cow position: chr6:33301119-33301305 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 148
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 114, 13

Conread position: 165-351
Cow position: chr6:53672789-53672978 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 144
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 67, 13

Conread position: 165-359
Cow position: chr6:43548722-43548531 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 137
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 188, 13

Conread position: 165-360
Cow position: chr6:33359104-33359295 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 135
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 178, 135

Conread position: 165-369
Cow position: chr6:47613420-47613222 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 155
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 19, 0

Conread position: 165-376
Cow position: chr6:39109916-39109714 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 148
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 165-378
Cow position: chr6:40775014-40774801 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 158
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 105, 13

Conread position: 166-302
Cow position: chr6:48575198-48575332 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 110
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 12, 0

Conread position: 166-338
Cow position: chr6:7254111-7253946 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 166-338
Cow position: chr6:40975616-40975788 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 143
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 166-338
Cow position: chr6:56842474-56842645 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 137
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 29, 20

Conread position: 166-338
Cow position: chr6:56858712-56858882 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 18, 0

Conread position: 166-340
Cow position: chr6:61071885-61071709 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 100, 18

Conread position: 166-342
Cow position: chr6:35238702-35238532 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 87, 0

Conread position: 166-345
Cow position: chr6:14950208-14950028 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 142
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 132, 12

Conread position: 166-346
Cow position: chr6:12307000-12307180 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 139
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 35, 19

Conread position: 166-351
Cow position: chr6:828379-828197 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 143
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 18, 0

Conread position: 166-366
Cow position: chr6:59507656-59507858 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 149
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 30, 81

Conread position: 167-329
Cow position: chr6:7137889-7137728 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 135
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 11, 0

Conread position: 167-330
Cow position: chr6:48677413-48677564 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 167-333
Cow position: chr6:63197868-63197701 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 127
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 28, 0

Conread position: 167-338
Cow position: chr6:618875-619042 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 122
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 125, 0

Conread position: 167-338
Cow position: chr6:4468073-4468237 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 138
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 92, 0

Conread position: 167-338
Cow position: chr6:15783541-15783366 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 41, 0

Conread position: 167-338
Cow position: chr6:46283652-46283482 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 135
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 11, 0

Conread position: 167-338
Cow position: chr6:56377479-56377309 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 133
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 28, 11

Conread position: 167-341
Cow position: chr6:46633564-46633737 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 28, 11

Conread position: 167-345
Cow position: chr6:46666410-46666586 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 140
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 11, 0

Conread position: 168-324
Cow position: chr6:12352292-12352448 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 168-331
Cow position: chr6:16699588-16699749 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 134
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 16, 0

Conread position: 168-332
Cow position: chr6:32125400-32125565 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 133
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 130, 10

Conread position: 168-338
Cow position: chr6:34494126-34494295 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 143
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 27, 10

Conread position: 168-338
Cow position: chr6:34504070-34503901 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 143
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 27, 10

Conread position: 168-338
Cow position: chr6:45161077-45160911 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 134
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 10, 0

Conread position: 168-344
Cow position: chr6:48248588-48248764 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 123
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 29, 18

Conread position: 168-345
Cow position: chr6:4389166-4389341 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 147
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 10, 0

Conread position: 168-347
Cow position: chr6:6998716-6998896 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 131
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 33, 9

Conread position: 169-267
Cow position: chr6:27150729-27150632 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 169-270
Cow position: chr6:31941322-31941422 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 86
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 169-299
Cow position: chr6:49579561-49579690 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 112
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 15, 0

Conread position: 169-326
Cow position: chr6:10681439-10681594 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 124
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 17, 0

Conread position: 169-326
Cow position: chr6:27173296-27173452 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 134
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 9, 0

Conread position: 169-327
Cow position: chr6:327908-327751 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 133
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 9, 0

Conread position: 169-327
Cow position: chr6:26667570-26667413 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 135
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 9, 0

Conread position: 169-327
Cow position: chr6:43621474-43621631 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 127
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 9, 0

Conread position: 169-328
Cow position: chr6:444473-444315 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 137
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 9, 0

Conread position: 169-329
Cow position: chr6:126680-126521 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 139
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 9, 0

Conread position: 169-329
Cow position: chr6:451808-451650 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 129
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 19, 0

Conread position: 169-329
Cow position: chr6:889012-889169 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 139
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 9, 0

Conread position: 169-329
Cow position: chr6:1402108-1401950 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 135
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 8, 0

Conread position: 169-329
Cow position: chr6:1406696-1406538 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 135
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 8, 0

Conread position: 169-329
Cow position: chr6:1797080-1797239 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 137
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 9, 0

Conread position: 169-329
Cow position: chr6:2875579-2875422 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 135
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 9, 0

Conread position: 169-329
Cow position: chr6:3152670-3152826 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 129
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 9, 0

Conread position: 169-329
Cow position: chr6:4505731-4505890 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 135
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 9, 0

Conread position: 169-329
Cow position: chr6:10044661-10044820 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 138
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 9, 0

Conread position: 169-329
Cow position: chr6:10536524-10536365 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 139
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 9, 0

Conread position: 169-329
Cow position: chr6:11020113-11020272 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 136
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 9, 0

Conread position: 169-329
Cow position: chr6:11401775-11401934 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 139
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 9, 0

Conread position: 169-329
Cow position: chr6:11453412-11453253 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 136
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 9, 0

Conread position: 169-329
Cow position: chr6:12971851-12972010 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 139
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 9, 0

Conread position: 169-329
Cow position: chr6:12997874-12998030 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 135
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 71, 0

Conread position: 169-329
Cow position: chr6:13494638-13494479 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 139
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 9, 0

Conread position: 169-329
Cow position: chr6:17386978-17387137 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 141
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 169-329
Cow position: chr6:17773178-17773019 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 141
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 169-329
Cow position: chr6:18803604-18803445 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 131
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 9, 0

Conread position: 169-329
Cow position: chr6:18912280-18912121 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 139
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 9, 0

Conread position: 169-329
Cow position: chr6:19103453-19103294 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 133
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 19, 0

Conread position: 169-329
Cow position: chr6:19712790-19712631 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 136
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 9, 0

Conread position: 169-329
Cow position: chr6:20215941-20215782 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 140
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 169-329
Cow position: chr6:20581321-20581165 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 134
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 9, 0

Conread position: 169-329
Cow position: chr6:21163758-21163917 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 140
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 169-329
Cow position: chr6:21712161-21712320 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 134
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 9, 0

Conread position: 169-329
Cow position: chr6:22043554-22043396 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 132
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 65, 9

Conread position: 169-329
Cow position: chr6:25374653-25374494 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 138
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 9, 0

Conread position: 169-329
Cow position: chr6:26324745-26324586 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 139
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 9, 0

Conread position: 169-329
Cow position: chr6:26771667-26771508 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 136
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 9, 0

Conread position: 169-329
Cow position: chr6:27094132-27093973 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 134
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 9, 0

Conread position: 169-329
Cow position: chr6:28000941-28000782 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 133
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 9, 0

Conread position: 169-329
Cow position: chr6:28065445-28065603 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 135
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 9, 0

Conread position: 169-329
Cow position: chr6:28160864-28161023 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 133
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 9, 0

Conread position: 169-329
Cow position: chr6:28401100-28401259 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 138
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 9, 0

Conread position: 169-329
Cow position: chr6:28487206-28487047 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 137
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 9, 0

Conread position: 169-329
Cow position: chr6:28701111-28700951 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 130
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 169-329
Cow position: chr6:37217094-37217253 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 137
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 9, 0

Conread position: 169-329
Cow position: chr6:37388021-37388180 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 139
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 9, 0

Conread position: 169-329
Cow position: chr6:38917585-38917426 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 139
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 9, 0

Conread position: 169-329
Cow position: chr6:39080372-39080531 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 141
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 169-329
Cow position: chr6:39912777-39912936 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 137
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 9, 0

Conread position: 169-329
Cow position: chr6:41158866-41158707 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 139
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 9, 0

Conread position: 169-329
Cow position: chr6:41495382-41495224 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 138
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 9, 0

Conread position: 169-329
Cow position: chr6:41834756-41834915 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 138
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 9, 0

Conread position: 169-329
Cow position: chr6:43049467-43049626 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 129
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 9, 0

Conread position: 169-329
Cow position: chr6:43921091-43921250 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 139
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 9, 0

Conread position: 169-329
Cow position: chr6:45747553-45747394 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 140
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 169-329
Cow position: chr6:45901538-45901379 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 137
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 9, 0

Conread position: 169-329
Cow position: chr6:45937734-45937893 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 136
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 9, 0

Conread position: 169-329
Cow position: chr6:45975954-45976113 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 141
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 169-329
Cow position: chr6:46608052-46607893 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 141
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 169-329
Cow position: chr6:48882198-48882357 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 141
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 169-329
Cow position: chr6:53537531-53537690 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 138
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 9, 0

Conread position: 169-329
Cow position: chr6:54900544-54900703 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 140
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 169-329
Cow position: chr6:56557157-56556998 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 140
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 169-329
Cow position: chr6:57521630-57521789 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 138
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 9, 0

Conread position: 169-329
Cow position: chr6:59051873-59052032 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 139
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 9, 0

Conread position: 169-329
Cow position: chr6:59834539-59834692 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 135
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 9, 0

Conread position: 169-329
Cow position: chr6:60379618-60379777 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 139
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 9, 0

Conread position: 169-329
Cow position: chr6:61051668-61051509 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 139
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 9, 0

Conread position: 169-329
Cow position: chr6:63177498-63177657 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 141
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 169-329
Cow position: chr6:63714821-63714662 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 140
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 169-329
Cow position: chr6:68030900-68031060 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 133
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 101, 9

Conread position: 169-336
Cow position: chr6:39897608-39897442 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 143
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 9, 0

Conread position: 169-338
Cow position: chr6:12647639-12647803 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 129
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 9, 0

Conread position: 169-338
Cow position: chr6:12662867-12662706 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 135
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 9, 0

Conread position: 169-338
Cow position: chr6:40139831-40139672 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 132
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 26, 15

Conread position: 169-338
Cow position: chr6:42481336-42481504 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 139
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 9, 0

Conread position: 169-338
Cow position: chr6:43797442-43797275 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 134
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 15, 0

Conread position: 169-338
Cow position: chr6:53543028-53542860 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 136
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 9, 0

Conread position: 169-350
Cow position: chr6:208455-208638 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 132
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 40, 62

Conread position: 169-354
Cow position: chr6:8382394-8382578 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 118
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 9, 0

Conread position: 169-370
Cow position: chr6:65943346-65943546 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 131
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 9, 0

Conread position: 170-299
Cow position: chr6:18474474-18474602 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 112
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 8, 0

Conread position: 170-343
Cow position: chr6:47317204-47317375 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 126
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 8, 0

Conread position: 171-329
Cow position: chr6:6568777-6568620 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 134
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 7, 0

Conread position: 171-329
Cow position: chr6:17632313-17632156 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 131
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 7, 0

Conread position: 171-329
Cow position: chr6:36258411-36258568 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 138
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 7, 0

Conread position: 171-338
Cow position: chr6:11442517-11442347 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 136
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 83, 0

Conread position: 171-338
Cow position: chr6:33984253-33984419 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 129
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 83, 7

Conread position: 172-329
Cow position: chr6:4274503-4274659 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 12, 0

Conread position: 172-329
Cow position: chr6:27541018-27541175 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 135
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 173-329
Cow position: chr6:43087157-43087001 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 128
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 173-343
Cow position: chr6:10425727-10425897 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 26, 15

Conread position: 177-338
Cow position: chr6:21584448-21584288 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 33, 0

Conread position: 178-308
Cow position: chr6:61892024-61891893 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 17, 0

Conread position: 178-327
Cow position: chr6:59619779-59619927 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 118
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 62, 0

Conread position: 178-329
Cow position: chr6:3987593-3987442 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 132
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 178-329
Cow position: chr6:28136200-28136352 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 127
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 17, 0

Conread position: 178-329
Cow position: chr6:33017599-33017449 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 122
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 81, 0

Conread position: 178-329
Cow position: chr6:34386756-34386605 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 132
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 178-329
Cow position: chr6:37761702-37761854 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 21, 9

Conread position: 178-329
Cow position: chr6:44146486-44146337 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 129
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 63, 0

Conread position: 178-329
Cow position: chr6:62333285-62333136 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 121
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 51, 0

Conread position: 178-335
Cow position: chr6:14851290-14851138 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 78, 0

Conread position: 178-335
Cow position: chr6:28156809-28156653 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 100, 0

Conread position: 178-337
Cow position: chr6:50446590-50446432 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 134
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 107, 0

Conread position: 178-338
Cow position: chr6:1263629-1263782 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 178-338
Cow position: chr6:1835885-1836044 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 127
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 147, 0

Conread position: 178-338
Cow position: chr6:6200792-6200952 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 130
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 178-338
Cow position: chr6:10650343-10650186 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 128
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 120, 0

Conread position: 178-338
Cow position: chr6:34548492-34548643 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 126
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 43, 0

Conread position: 178-338
Cow position: chr6:46391017-46391168 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 125
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 66, 0

Conread position: 178-338
Cow position: chr6:60456141-60456300 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 136
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 21, 0

Conread position: 178-338
Cow position: chr6:65909788-65909948 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 135
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 178-338
Cow position: chr6:67187016-67187169 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 70, 0

Conread position: 178-339
Cow position: chr6:31530053-31530216 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 178-343
Cow position: chr6:40319723-40319888 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 131
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 178-345
Cow position: chr6:19044651-19044819 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 137
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 17, 0

Conread position: 178-345
Cow position: chr6:63094120-63094286 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 135
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 162, 0

Conread position: 178-358
Cow position: chr6:63252595-63252415 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 139
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 55, 177

Conread position: 178-360
Cow position: chr6:43054014-43053831 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 129
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 17, 0

Conread position: 178-375
Cow position: chr6:39093078-39093279 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 152
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 71, 0

Conread position: 178-383
Cow position: chr6:53930121-53929915 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 147
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 145, 100

Conread position: 178-385
Cow position: chr6:11466601-11466397 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 144
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 90, 0

Conread position: 179-305
Cow position: chr6:10503403-10503277 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 179-314
Cow position: chr6:51385703-51385838 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 179-335
Cow position: chr6:64314719-64314562 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 114
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 179-336
Cow position: chr6:52189528-52189364 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 179-338
Cow position: chr6:3928597-3928757 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 125
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 16, 0

Conread position: 179-338
Cow position: chr6:6182263-6182104 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 133
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 16, 63

Conread position: 179-338
Cow position: chr6:28342966-28343125 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 133
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 16, 82

Conread position: 179-338
Cow position: chr6:29239028-29239181 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 129
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 59, 0

Conread position: 179-338
Cow position: chr6:38988360-38988201 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 128
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 179-338
Cow position: chr6:40158074-40157913 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 127
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 34, 0

Conread position: 179-338
Cow position: chr6:44098148-44098305 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 123
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 45, 0

Conread position: 179-338
Cow position: chr6:66839826-66839989 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 118
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 128, 0

Conread position: 179-343
Cow position: chr6:22663613-22663458 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 179-343
Cow position: chr6:44510553-44510724 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 179-343
Cow position: chr6:51879192-51879352 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 42, 0

Conread position: 179-345
Cow position: chr6:6613750-6613920 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 31, 166

Conread position: 179-350
Cow position: chr6:35825511-35825678 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 164, 18

Conread position: 179-351
Cow position: chr6:31880323-31880153 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 136
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 11, 0

Conread position: 179-351
Cow position: chr6:41816184-41816016 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 168, 115

Conread position: 179-369
Cow position: chr6:19145625-19145432 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 141
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 17, 40

Conread position: 180-323
Cow position: chr6:1734197-1734055 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 15, 99

Conread position: 180-334
Cow position: chr6:1077791-1077636 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 6, 0

Conread position: 180-335
Cow position: chr6:17602942-17602785 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 115
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 180-338
Cow position: chr6:6459574-6459732 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 130
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 67, 124

Conread position: 180-338
Cow position: chr6:16410521-16410677 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 133
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 15, 42

Conread position: 180-338
Cow position: chr6:22017712-22017554 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 15, 68

Conread position: 180-338
Cow position: chr6:35725401-35725560 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 15, 0

Conread position: 180-338
Cow position: chr6:42420582-42420741 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 15, 0

Conread position: 180-338
Cow position: chr6:52245966-52246119 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 180-345
Cow position: chr6:46162198-46162033 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 129
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 180-360
Cow position: chr6:29084925-29084746 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 137
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 156, 0

Conread position: 181-308
Cow position: chr6:25408236-25408111 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 104
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 40, 0

Conread position: 181-338
Cow position: chr6:10253243-10253394 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 14, 87

Conread position: 181-345
Cow position: chr6:12099889-12100049 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 132
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 94, 0

Conread position: 181-374
Cow position: chr6:57967417-57967612 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 138
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 170, 159

Conread position: 181-377
Cow position: chr6:2582084-2582275 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 138
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 42, 0

Conread position: 182-338
Cow position: chr6:47630649-47630801 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 182-338
Cow position: chr6:48327674-48327829 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 116
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 20, 114

Conread position: 182-347
Cow position: chr6:57119778-57119947 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 120
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 74, 0

Conread position: 182-349
Cow position: chr6:44905854-44906022 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 31, 0

Conread position: 182-351
Cow position: chr6:54321240-54321072 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 122
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 112, 22

Conread position: 183-338
Cow position: chr6:27887395-27887545 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 123
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 184-326
Cow position: chr6:16752294-16752437 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 107
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 12, 0

Conread position: 189-338
Cow position: chr6:61066404-61066551 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 111
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 38, 67

Conread position: 190-308
Cow position: chr6:56451631-56451511 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 103
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 104, 0

Conread position: 190-338
Cow position: chr6:3544969-3545114 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 131, 47

Conread position: 190-338
Cow position: chr6:14689993-14690139 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 118
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 51, 0

Conread position: 190-338
Cow position: chr6:55141360-55141211 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 12, 0

Conread position: 190-351
Cow position: chr6:15181603-15181763 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 47, 0

Conread position: 191-309
Cow position: chr6:48947170-48947053 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 191-317
Cow position: chr6:54377026-54377152 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 191-334
Cow position: chr6:1175456-1175320 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 94, 0

Conread position: 191-334
Cow position: chr6:50637736-50637875 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 114
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 42, 0

Conread position: 191-335
Cow position: chr6:37643898-37644037 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 191-338
Cow position: chr6:7191151-7191001 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 122
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 51, 0

Conread position: 191-338
Cow position: chr6:9036416-9036267 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 123
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 51, 0

Conread position: 191-338
Cow position: chr6:39359003-39358858 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 127
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 111, 30

Conread position: 191-338
Cow position: chr6:62921899-62921752 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 119
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 191-345
Cow position: chr6:1104682-1104532 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 132
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 44, 0

Conread position: 191-345
Cow position: chr6:17334235-17334388 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 126
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 149, 0

Conread position: 191-345
Cow position: chr6:57552082-57551928 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 128
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 99, 61

Conread position: 192-327
Cow position: chr6:8965501-8965636 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 112
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 193-332
Cow position: chr6:6721449-6721586 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 89, 0

Conread position: 194-338
Cow position: chr6:6944499-6944354 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 31, 0

Conread position: 194-338
Cow position: chr6:54293466-54293608 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 30, 0

Conread position: 194-339
Cow position: chr6:20943264-20943411 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 10, 0

Conread position: 194-345
Cow position: chr6:529376-529226 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 125
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 146, 0

Conread position: 194-351
Cow position: chr6:30076792-30076636 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 109, 0

Conread position: 194-367
Cow position: chr6:62828838-62828668 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 169, 69

Conread position: 195-326
Cow position: chr6:28502914-28503039 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 108
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 16, 0

Conread position: 196-325
Cow position: chr6:18969710-18969581 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 196-329
Cow position: chr6:40137924-40137791 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 196-332
Cow position: chr6:55456597-55456460 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 102
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 94, 0

Conread position: 196-338
Cow position: chr6:6743819-6743961 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 196-338
Cow position: chr6:13591793-13591935 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 196-338
Cow position: chr6:65862015-65862160 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 118
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 31, 0

Conread position: 196-343
Cow position: chr6:51970533-51970386 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 107
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 196-347
Cow position: chr6:41556792-41556940 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 109, 15

Conread position: 196-360
Cow position: chr6:6163587-6163750 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 56, 0

Conread position: 197-326
Cow position: chr6:14932375-14932246 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 109
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 197-338
Cow position: chr6:30316447-30316307 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 17, 0

Conread position: 197-338
Cow position: chr6:55345837-55345699 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 80, 0

Conread position: 198-338
Cow position: chr6:54378956-54379096 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 115, 70

Conread position: 198-345
Cow position: chr6:50114184-50114327 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 79, 0

Conread position: 199-329
Cow position: chr6:2867976-2867846 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 113
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 199-329
Cow position: chr6:30708713-30708583 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 115
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 199-338
Cow position: chr6:28080596-28080462 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 115
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 59, 0

Conread position: 199-339
Cow position: chr6:40760513-40760649 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 112
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 45, 0

Conread position: 199-341
Cow position: chr6:50801083-50800941 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 199-345
Cow position: chr6:25358413-25358557 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 121
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 84, 0

Conread position: 200-325
Cow position: chr6:43039397-43039522 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 110
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 200-328
Cow position: chr6:29298702-29298830 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 114
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 201-324
Cow position: chr6:10683349-10683469 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 116, 52

Conread position: 201-328
Cow position: chr6:52240349-52240219 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 57, 0

Conread position: 201-333
Cow position: chr6:8562063-8562195 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 101
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 201-338
Cow position: chr6:12680507-12680641 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 21, 0

Conread position: 201-338
Cow position: chr6:35434924-35435061 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 112
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 201-338
Cow position: chr6:48807649-48807512 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 103
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 202-329
Cow position: chr6:14389239-14389112 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 115
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 202-336
Cow position: chr6:35614073-35613941 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 112
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 95, 0

Conread position: 202-338
Cow position: chr6:65844542-65844678 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 114
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 202-350
Cow position: chr6:27526515-27526370 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 120
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 19, 0

Conread position: 202-351
Cow position: chr6:28164011-28164160 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 203-309
Cow position: chr6:15182226-15182333 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 92
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 15, 0

Conread position: 203-345
Cow position: chr6:49794445-49794587 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 123
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 204-338
Cow position: chr6:32070008-32069876 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 204-338
Cow position: chr6:52401131-52401265 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 108
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 206-301
Cow position: chr6:569972-569878 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 84
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 73, 0

Conread position: 206-325
Cow position: chr6:33508947-33509066 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 100
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 206-329
Cow position: chr6:56887903-56888026 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 107
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 206-335
Cow position: chr6:4903304-4903176 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 34, 0

Conread position: 206-338
Cow position: chr6:36830523-36830655 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 206-345
Cow position: chr6:50120442-50120304 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 134, 0

Conread position: 206-351
Cow position: chr6:46676584-46676439 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 8, 64

Conread position: 207-302
Cow position: chr6:47340005-47339910 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 85
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 207-329
Cow position: chr6:32664922-32665044 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 106
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 208-338
Cow position: chr6:13405828-13405958 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 98
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 208-338
Cow position: chr6:30896297-30896428 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 74, 0

Conread position: 208-338
Cow position: chr6:31689043-31688913 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 208-344
Cow position: chr6:47171537-47171673 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 109
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 208-345
Cow position: chr6:64304853-64304716 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 114
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 212-329
Cow position: chr6:18874671-18874788 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 99
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 212-336
Cow position: chr6:26914452-26914576 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 103
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 212-338
Cow position: chr6:35104043-35103917 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 106
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 214-338
Cow position: chr6:11788162-11788286 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 214-345
Cow position: chr6:8432389-8432520 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 215-327
Cow position: chr6:8284274-8284163 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 95, 0

Conread position: 215-338
Cow position: chr6:48057-47934 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 108
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 215-343
Cow position: chr6:28482164-28482293 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 98
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 216-329
Cow position: chr6:8207727-8207840 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 100
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 216-329
Cow position: chr6:19684466-19684353 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 97
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 220-338
Cow position: chr6:16191126-16191244 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 221-331
Cow position: chr6:21312400-21312290 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 94
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 221-345
Cow position: chr6:28101179-28101056 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 113, 0

Conread position: 224-338
Cow position: chr6:41876691-41876578 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 73, 0

Conread position: 224-345
Cow position: chr6:875985-875865 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 101
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 116, 0

Conread position: 224-345
Cow position: chr6:53345157-53345276 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 66, 0

Conread position: 225-345
Cow position: chr6:38995215-38995095 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 227-329
Cow position: chr6:54887103-54887001 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 85
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 228-329
Cow position: chr6:41437382-41437483 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 86
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 228-338
Cow position: chr6:6768650-6768760 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 228-351
Cow position: chr6:22332982-22332860 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 119, 89

Conread position: 229-345
Cow position: chr6:7995533-7995418 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 111, 0

Conread position: 230-329
Cow position: chr6:44131338-44131239 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 90
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 230-338
Cow position: chr6:54218036-54218144 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 232-338
Cow position: chr6:3095600-3095494 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 93
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 233-345
Cow position: chr6:10332740-10332629 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 107, 0

Conread position: 235-338
Cow position: chr6:24075180-24075080 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 93
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 60, 0

Conread position: 235-338
Cow position: chr6:32121267-32121370 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 88
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 237-329
Cow position: chr6:52481867-52481959 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 82
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 238-338
Cow position: chr6:10176979-10176879 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 83
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 238-343
Cow position: chr6:14697020-14696915 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 241-338
Cow position: chr6:43585633-43585730 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 81
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 242-329
Cow position: chr6:25375785-25375872 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 79
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 242-338
Cow position: chr6:56849040-56849136 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 81
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 242-345
Cow position: chr6:37488128-37488026 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 5, 0

Conread position: 244-345
Cow position: chr6:51467875-51467975 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 86
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 96, 0

Conread position: 246-327
Cow position: chr6:6569215-6569296 (view UCSC Genome Browser custom track)
Alignm length: 82
Alignm identity: 73
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 252-329
Cow position: chr6:55289631-55289554 (view UCSC Genome Browser custom track)
Alignm length: 78
Alignm identity: 71
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.