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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8053H07.3
        

               
Conread position:
               
820-1169
               

               
Cow position:
               
chr16:25839855-25839484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 83
               

               
Conread position:
               
822-1173
               

               
Cow position:
               
chr16:54709814-54710172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
25, 9
               

               
Conread position:
               
824-1171
               

               
Cow position:
               
chr16:28395851-28396237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
832-1172
               

               
Cow position:
               
chr16:30639533-30639209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
61, 27
               

               
Conread position:
               
836-1152
               

               
Cow position:
               
chr16:22207282-22206958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
127, 57
               

               
Conread position:
               
841-1173
               

               
Cow position:
               
chr16:51709931-51710267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
57, 5
               

               
Conread position:
               
841-1173
               

               
Cow position:
               
chr16:54579384-54579031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
57, 24
               

               
Conread position:
               
842-1173
               

               
Cow position:
               
chr16:14974349-14974671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 48
               

               
Conread position:
               
843-1176
               

               
Cow position:
               
chr16:8322776-8323124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 39
               

               
Conread position:
               
844-1173
               

               
Cow position:
               
chr16:18692947-18693271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
14, 86
               

               
Conread position:
               
844-1176
               

               
Cow position:
               
chr16:52834684-52835025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
54, 284
               

               
Conread position:
               
846-1004
               

               
Cow position:
               
chr16:13316679-13316835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
81, 42
               

               
Conread position:
               
846-1169
               

               
Cow position:
               
chr16:50688722-50688389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
847-1173
               

               
Cow position:
               
chr16:41689890-41689557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 55
               

               
Conread position:
               
849-1160
               

               
Cow position:
               
chr16:37719346-37719031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
118, 10
               

               
Conread position:
               
850-1060
               

               
Cow position:
               
chr16:49321147-49320943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
850-1163
               

               
Cow position:
               
chr16:23955641-23955955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
32, 53
               

               
Conread position:
               
850-1173
               

               
Cow position:
               
chr16:28692545-28692859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
13, 80
               

               
Conread position:
               
850-1176
               

               
Cow position:
               
chr16:52274924-52275272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 254
               

               
Conread position:
               
851-1034
               

               
Cow position:
               
chr16:41806914-41807098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
112, 42
               

               
Conread position:
               
851-1176
               

               
Cow position:
               
chr16:14754119-14754464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 21
               

               
Conread position:
               
851-1176
               

               
Cow position:
               
chr16:48493373-48493037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 77
               

               
Conread position:
               
851-1176
               

               
Cow position:
               
chr16:56232023-56231685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
18, 252
               

               
Conread position:
               
852-1172
               

               
Cow position:
               
chr16:54679857-54679531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
30, 7
               

               
Conread position:
               
852-1176
               

               
Cow position:
               
chr16:4902777-4902447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
94, 23
               

               
Conread position:
               
853-1052
               

               
Cow position:
               
chr16:29636037-29636245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
853-1100
               

               
Cow position:
               
chr16:28454111-28454354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
117, 44
               

               
Conread position:
               
853-1130
               

               
Cow position:
               
chr16:47835126-47834834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
45, 14
               

               
Conread position:
               
853-1173
               

               
Cow position:
               
chr16:22808366-22808691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 85
               

               
Conread position:
               
853-1176
               

               
Cow position:
               
chr16:228308-228627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
42, 63
               

               
Conread position:
               
853-1176
               

               
Cow position:
               
chr16:7542496-7542141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
854-1030
               

               
Cow position:
               
chr16:56283131-56282955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
854-1035
               

               
Cow position:
               
chr16:17474963-17474768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
44, 113
               

               
Conread position:
               
855-1173
               

               
Cow position:
               
chr16:13660045-13660374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 74
               

               
Conread position:
               
856-1005
               

               
Cow position:
               
chr16:47963478-47963324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
39, 71
               

               
Conread position:
               
856-1023
               

               
Cow position:
               
chr16:42629260-42629428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
40, 16
               

               
Conread position:
               
856-1062
               

               
Cow position:
               
chr16:7496454-7496233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
39, 201
               

               
Conread position:
               
856-1063
               

               
Cow position:
               
chr16:15254568-15254778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
856-1106
               

               
Cow position:
               
chr16:42432912-42433185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
856-1138
               

               
Cow position:
               
chr16:44429082-44428782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
39, 277
               

               
Conread position:
               
856-1168
               

               
Cow position:
               
chr16:8025663-8025979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 214
               

               
Conread position:
               
856-1168
               

               
Cow position:
               
chr16:10148472-10148143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
856-1168
               

               
Cow position:
               
chr16:42733816-42734147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
39, 294
               

               
Conread position:
               
856-1170
               

               
Cow position:
               
chr16:52790236-52789922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
40, 71
               

               
Conread position:
               
856-1171
               

               
Cow position:
               
chr16:16055875-16056177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
32, 43
               

               
Conread position:
               
856-1171
               

               
Cow position:
               
chr16:29655519-29655192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
42, 249
               

               
Conread position:
               
856-1172
               

               
Cow position:
               
chr16:15504327-15504660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
40, 160
               

               
Conread position:
               
856-1172
               

               
Cow position:
               
chr16:16264912-16265237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
9, 60
               

               
Conread position:
               
856-1172
               

               
Cow position:
               
chr16:50453953-50453624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
71, 32
               

               
Conread position:
               
856-1173
               

               
Cow position:
               
chr16:44550-44247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
39, 71
               

               
Conread position:
               
856-1173
               

               
Cow position:
               
chr16:15809164-15808836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 71
               

               
Conread position:
               
856-1173
               

               
Cow position:
               
chr16:41530103-41530430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
37, 221
               

               
Conread position:
               
856-1175
               

               
Cow position:
               
chr16:50933689-50934011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
39, 143
               

               
Conread position:
               
856-1176
               

               
Cow position:
               
chr16:14685185-14685531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
16, 230
               

               
Conread position:
               
856-1176
               

               
Cow position:
               
chr16:20476738-20476394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
42, 178
               

               
Conread position:
               
856-1176
               

               
Cow position:
               
chr16:23681566-23681228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
42, 159
               

               
Conread position:
               
856-1176
               

               
Cow position:
               
chr16:36120791-36121122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
42, 216
               

               
Conread position:
               
856-1176
               

               
Cow position:
               
chr16:39165438-39165102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
42, 193
               

               
Conread position:
               
856-1176
               

               
Cow position:
               
chr16:56565793-56565454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
37, 73
               

               
Conread position:
               
857-1167
               

               
Cow position:
               
chr16:11085195-11085512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
12, 57
               

               
Conread position:
               
858-1173
               

               
Cow position:
               
chr16:15370886-15370540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
859-1026
               

               
Cow position:
               
chr16:4102640-4102819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
859-1074
               

               
Cow position:
               
chr16:53408745-53408964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
36, 67
               

               
Conread position:
               
859-1080
               

               
Cow position:
               
chr16:37401441-37401209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
37, 94
               

               
Conread position:
               
859-1120
               

               
Cow position:
               
chr16:50931331-50931602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
39, 158
               

               
Conread position:
               
859-1127
               

               
Cow position:
               
chr16:19670156-19670440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
39, 241
               

               
Conread position:
               
859-1150
               

               
Cow position:
               
chr16:47852396-47852708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
39, 224
               

               
Conread position:
               
859-1160
               

               
Cow position:
               
chr16:11083198-11082883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
36, 236
               

               
Conread position:
               
859-1171
               

               
Cow position:
               
chr16:29096119-29095803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
39, 189
               

               
Conread position:
               
859-1172
               

               
Cow position:
               
chr16:43661629-43661307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
103, 21
               

               
Conread position:
               
859-1173
               

               
Cow position:
               
chr16:24855736-24855403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
37, 167
               

               
Conread position:
               
859-1173
               

               
Cow position:
               
chr16:54225314-54225645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
10, 197
               

               
Conread position:
               
859-1176
               

               
Cow position:
               
chr16:12360785-12361118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
39, 56
               

               
Conread position:
               
859-1176
               

               
Cow position:
               
chr16:23472944-23472605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 96
               

               
Conread position:
               
859-1176
               

               
Cow position:
               
chr16:33508242-33507925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
77, 37
               

               
Conread position:
               
859-1176
               

               
Cow position:
               
chr16:37452436-37452760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
21, 54
               

               
Conread position:
               
859-1176
               

               
Cow position:
               
chr16:45047453-45047771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
39, 112
               

               
Conread position:
               
859-1176
               

               
Cow position:
               
chr16:48385215-48385542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 151
               

               
Conread position:
               
859-1176
               

               
Cow position:
               
chr16:49229572-49229913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
69, 310
               

               
Conread position:
               
859-1176
               

               
Cow position:
               
chr16:53267906-53267581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
36, 55
               

               
Conread position:
               
859-1176
               

               
Cow position:
               
chr16:53627251-53627569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
30, 68
               

               
Conread position:
               
860-1109
               

               
Cow position:
               
chr16:4911250-4911501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
38, 120
               

               
Conread position:
               
860-1116
               

               
Cow position:
               
chr16:8242726-8242999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
36, 196
               

               
Conread position:
               
860-1117
               

               
Cow position:
               
chr16:51652849-51652591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
35, 67
               

               
Conread position:
               
860-1147
               

               
Cow position:
               
chr16:44580894-44581183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 34
               

               
Conread position:
               
860-1152
               

               
Cow position:
               
chr16:22984951-22984640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
37, 164
               

               
Conread position:
               
860-1160
               

               
Cow position:
               
chr16:9161271-9160966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
64, 26
               

               
Conread position:
               
860-1163
               

               
Cow position:
               
chr16:51697276-51696951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 282
               

               
Conread position:
               
860-1173
               

               
Cow position:
               
chr16:19002909-19003215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
35, 76
               

               
Conread position:
               
860-1176
               

               
Cow position:
               
chr16:820452-820106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
860-1176
               

               
Cow position:
               
chr16:11774849-11775192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
34, 230
               

               
Conread position:
               
861-1108
               

               
Cow position:
               
chr16:11134785-11135054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
861-1124
               

               
Cow position:
               
chr16:45731205-45731478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
28, 36
               

               
Conread position:
               
861-1147
               

               
Cow position:
               
chr16:42312565-42312275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
34, 67
               

               
Conread position:
               
861-1156
               

               
Cow position:
               
chr16:6344258-6344564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 76
               

               
Conread position:
               
861-1163
               

               
Cow position:
               
chr16:45554634-45554314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
861-1172
               

               
Cow position:
               
chr16:42340377-42340058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 208
               

               
Conread position:
               
861-1176
               

               
Cow position:
               
chr16:11806854-11806534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
36, 45
               

               
Conread position:
               
861-1176
               

               
Cow position:
               
chr16:45693324-45693003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
34, 50
               

               
Conread position:
               
862-1130
               

               
Cow position:
               
chr16:20872210-20871931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
61, 50
               

               
Conread position:
               
862-1151
               

               
Cow position:
               
chr16:54226415-54226715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 149
               

               
Conread position:
               
862-1173
               

               
Cow position:
               
chr16:8315013-8315323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 72
               

               
Conread position:
               
862-1176
               

               
Cow position:
               
chr16:13990165-13989840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
36, 214
               

               
Conread position:
               
862-1176
               

               
Cow position:
               
chr16:23025514-23025203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
97, 32
               

               
Conread position:
               
862-1176
               

               
Cow position:
               
chr16:46627666-46627976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 75
               

               
Conread position:
               
863-1168
               

               
Cow position:
               
chr16:47519030-47518704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
35, 211
               

               
Conread position:
               
863-1176
               

               
Cow position:
               
chr16:43505637-43505940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 18
               

               
Conread position:
               
865-1067
               

               
Cow position:
               
chr16:32893815-32893599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
865-1080
               

               
Cow position:
               
chr16:55944953-55945183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
11, 25
               

               
Conread position:
               
865-1176
               

               
Cow position:
               
chr16:13712746-13713054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
30, 38
               

               
Conread position:
               
867-1151
               

               
Cow position:
               
chr16:21317415-21317712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
867-1154
               

               
Cow position:
               
chr16:27014076-27013777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
31, 47
               

               
Conread position:
               
867-1163
               

               
Cow position:
               
chr16:29766514-29766208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
28, 94
               

               
Conread position:
               
867-1171
               

               
Cow position:
               
chr16:50872995-50873301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
29, 61
               

               
Conread position:
               
867-1173
               

               
Cow position:
               
chr16:11008522-11008206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 102
               

               
Conread position:
               
867-1176
               

               
Cow position:
               
chr16:26372769-26373096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
31, 142
               

               
Conread position:
               
867-1176
               

               
Cow position:
               
chr16:42778139-42777825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
35, 102
               

               
Conread position:
               
867-1176
               

               
Cow position:
               
chr16:51069740-51070067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
28, 50
               

               
Conread position:
               
868-1067
               

               
Cow position:
               
chr16:50678050-50677833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
30, 40
               

               
Conread position:
               
868-1081
               

               
Cow position:
               
chr16:7394746-7394976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
869-1168
               

               
Cow position:
               
chr16:33595756-33596069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
29, 225
               

               
Conread position:
               
870-1050
               

               
Cow position:
               
chr16:44688208-44688405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
870-1176
               

               
Cow position:
               
chr16:27723402-27723071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 188
               

               
Conread position:
               
872-1016
               

               
Cow position:
               
chr16:10617683-10617832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
26, 56
               

               
Conread position:
               
872-1173
               

               
Cow position:
               
chr16:18206144-18205822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
26, 189
               

               
Conread position:
               
873-1099
               

               
Cow position:
               
chr16:28827008-28827241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
25, 64
               

               
Conread position:
               
873-1171
               

               
Cow position:
               
chr16:21905310-21905029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 39
               

               
Conread position:
               
873-1176
               

               
Cow position:
               
chr16:689872-689569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
25, 33
               

               
Conread position:
               
873-1176
               

               
Cow position:
               
chr16:45676686-45676994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
23, 106
               

               
Conread position:
               
874-1168
               

               
Cow position:
               
chr16:10505001-10504699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
22, 120
               

               
Conread position:
               
874-1176
               

               
Cow position:
               
chr16:36930150-36930462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
21, 53
               

               
Conread position:
               
874-1176
               

               
Cow position:
               
chr16:37062236-37062537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
93, 24
               

               
Conread position:
               
883-1173
               

               
Cow position:
               
chr16:49125367-49125667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
23, 32
               

               
Conread position:
               
884-1055
               

               
Cow position:
               
chr16:15905091-15905267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
884-1111
               

               
Cow position:
               
chr16:9830601-9830372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
87, 26
               

               
Conread position:
               
884-1111
               

               
Cow position:
               
chr16:56670758-56670995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
25, 190
               

               
Conread position:
               
884-1163
               

               
Cow position:
               
chr16:8738219-8737936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
75, 26
               

               
Conread position:
               
884-1169
               

               
Cow position:
               
chr16:42444312-42444021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
87, 32
               

               
Conread position:
               
884-1172
               

               
Cow position:
               
chr16:38663556-38663846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
26, 38
               

               
Conread position:
               
884-1172
               

               
Cow position:
               
chr16:41578378-41578088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
86, 18
               

               
Conread position:
               
884-1173
               

               
Cow position:
               
chr16:56082210-56082499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
25, 40
               

               
Conread position:
               
884-1176
               

               
Cow position:
               
chr16:7665792-7665493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 26
               

               
Conread position:
               
884-1176
               

               
Cow position:
               
chr16:8522235-8522537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
79, 26
               

               
Conread position:
               
884-1176
               

               
Cow position:
               
chr16:14106796-14106504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
25, 33
               

               
Conread position:
               
884-1176
               

               
Cow position:
               
chr16:15824290-15824586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
84, 24
               

               
Conread position:
               
884-1176
               

               
Cow position:
               
chr16:17143090-17142794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
84, 26
               

               
Conread position:
               
884-1176
               

               
Cow position:
               
chr16:38708684-38708972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
79, 25
               

               
Conread position:
               
892-1176
               

               
Cow position:
               
chr16:13306727-13307005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
78, 18
               

               
Conread position:
               
892-1176
               

               
Cow position:
               
chr16:18757690-18757982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
17, 33
               

               
Conread position:
               
892-1176
               

               
Cow position:
               
chr16:43308416-43308707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
75, 10
               

               
Conread position:
               
892-1176
               

               
Cow position:
               
chr16:47820717-47820432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
74, 116
               

               
Conread position:
               
892-1176
               

               
Cow position:
               
chr16:51501072-51500792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
76, 18
               

               
Conread position:
               
894-1151
               

               
Cow position:
               
chr16:15938387-15938645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
85, 36
               

               
Conread position:
               
894-1170
               

               
Cow position:
               
chr16:8236200-8236454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
189, 28
               

               
Conread position:
               
895-1176
               

               
Cow position:
               
chr16:5725616-5725326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
37, 233
               

               
Conread position:
               
903-1173
               

               
Cow position:
               
chr16:52854883-52855163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
64, 169
               

               
Conread position:
               
903-1176
               

               
Cow position:
               
chr16:13181874-13181599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
51, 18
               

               
Conread position:
               
904-1113
               

               
Cow position:
               
chr16:41711806-41711605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
60, 19
               

               
Conread position:
               
916-1157
               

               
Cow position:
               
chr16:53089232-53089463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
200, 38
               

               
Conread position:
               
916-1176
               

               
Cow position:
               
chr16:43800795-43801061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 18
               

               
Conread position:
               
922-1176
               

               
Cow position:
               
chr16:56831622-56831879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
40, 146
               

               
Conread position:
               
923-1127
               

               
Cow position:
               
chr16:44683538-44683754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
47, 152
               

               
Conread position:
               
923-1176
               

               
Cow position:
               
chr16:30036872-30037133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
45, 95
               

               
Conread position:
               
924-1060
               

               
Cow position:
               
chr16:39202257-39202118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
39, 129
               

               
Conread position:
               
924-1111
               

               
Cow position:
               
chr16:42539471-42539664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
39, 84
               

               
Conread position:
               
924-1134
               

               
Cow position:
               
chr16:45299810-45300025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
36, 141
               

               
Conread position:
               
924-1144
               

               
Cow position:
               
chr16:29527940-29527719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
45, 29
               

               
Conread position:
               
924-1145
               

               
Cow position:
               
chr16:4399853-4399626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
43, 87
               

               
Conread position:
               
924-1151
               

               
Cow position:
               
chr16:48086753-48086984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
43, 10
               

               
Conread position:
               
924-1161
               

               
Cow position:
               
chr16:45457079-45456830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
39, 10
               

               
Conread position:
               
924-1168
               

               
Cow position:
               
chr16:13969249-13969514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
924-1169
               

               
Cow position:
               
chr16:44210441-44210700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
44, 18
               

               
Conread position:
               
924-1171
               

               
Cow position:
               
chr16:16548726-16548473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 18
               

               
Conread position:
               
924-1173
               

               
Cow position:
               
chr16:16096851-16096597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
45, 77
               

               
Conread position:
               
924-1173
               

               
Cow position:
               
chr16:17289065-17288802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
924-1173
               

               
Cow position:
               
chr16:17945637-17945383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
924-1173
               

               
Cow position:
               
chr16:48095647-48095900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
35, 155
               

               
Conread position:
               
924-1173
               

               
Cow position:
               
chr16:48494437-48494692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
924-1176
               

               
Cow position:
               
chr16:4626273-4626533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
924-1176
               

               
Cow position:
               
chr16:4979920-4979667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
24, 173
               

               
Conread position:
               
924-1176
               

               
Cow position:
               
chr16:8841010-8840751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
39, 139
               

               
Conread position:
               
924-1176
               

               
Cow position:
               
chr16:14242485-14242230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
46, 11
               

               
Conread position:
               
924-1176
               

               
Cow position:
               
chr16:19003415-19003658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
44, 135
               

               
Conread position:
               
924-1176
               

               
Cow position:
               
chr16:20633758-20634020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 114
               

               
Conread position:
               
924-1176
               

               
Cow position:
               
chr16:31348648-31348909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
47, 67
               

               
Conread position:
               
924-1176
               

               
Cow position:
               
chr16:39616839-39616601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
46, 10
               

               
Conread position:
               
924-1176
               

               
Cow position:
               
chr16:45678096-45677845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
44, 195
               

               
Conread position:
               
924-1176
               

               
Cow position:
               
chr16:46433207-46433469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
46, 235
               

               
Conread position:
               
925-1060
               

               
Cow position:
               
chr16:29026322-29026186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
43, 81
               

               
Conread position:
               
925-1072
               

               
Cow position:
               
chr16:44713363-44713515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
925-1081
               

               
Cow position:
               
chr16:15953702-15953864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
45, 17
               

               
Conread position:
               
925-1107
               

               
Cow position:
               
chr16:17135841-17135657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
43, 81
               

               
Conread position:
               
925-1110
               

               
Cow position:
               
chr16:30358946-30359134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
42, 144
               

               
Conread position:
               
925-1124
               

               
Cow position:
               
chr16:8273721-8273925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
40, 140
               

               
Conread position:
               
925-1125
               

               
Cow position:
               
chr16:34220303-34220093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
925-1130
               

               
Cow position:
               
chr16:7619068-7619273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
35, 17
               

               
Conread position:
               
925-1134
               

               
Cow position:
               
chr16:19052752-19052540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
40, 154
               

               
Conread position:
               
925-1144
               

               
Cow position:
               
chr16:45122152-45121929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
43, 164
               

               
Conread position:
               
925-1150
               

               
Cow position:
               
chr16:29677517-29677745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
22, 149
               

               
Conread position:
               
925-1152
               

               
Cow position:
               
chr16:10032755-10032522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
35, 25
               

               
Conread position:
               
925-1156
               

               
Cow position:
               
chr16:21761854-21762093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
43, 12
               

               
Conread position:
               
925-1162
               

               
Cow position:
               
chr16:25170508-25170261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
42, 12
               

               
Conread position:
               
925-1163
               

               
Cow position:
               
chr16:4856985-4857224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
42, 81
               

               
Conread position:
               
925-1166
               

               
Cow position:
               
chr16:31117498-31117746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
43, 111
               

               
Conread position:
               
925-1168
               

               
Cow position:
               
chr16:35188366-35188120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
159, 140
               

               
Conread position:
               
925-1170
               

               
Cow position:
               
chr16:2223280-2223539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
925-1170
               

               
Cow position:
               
chr16:9973382-9973634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
925-1171
               

               
Cow position:
               
chr16:3634233-3633976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
925-1171
               

               
Cow position:
               
chr16:17282775-17282528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
45, 81
               

               
Conread position:
               
925-1172
               

               
Cow position:
               
chr16:5364018-5363758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
46, 102
               

               
Conread position:
               
925-1172
               

               
Cow position:
               
chr16:7418494-7418246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
38, 80
               

               
Conread position:
               
925-1172
               

               
Cow position:
               
chr16:15960173-15960429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
925-1172
               

               
Cow position:
               
chr16:50282315-50282563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
43, 142
               

               
Conread position:
               
925-1173
               

               
Cow position:
               
chr16:7499167-7498922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
42, 104
               

               
Conread position:
               
925-1173
               

               
Cow position:
               
chr16:7505201-7504949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
153, 46
               

               
Conread position:
               
925-1173
               

               
Cow position:
               
chr16:22841943-22842198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
45, 25
               

               
Conread position:
               
925-1173
               

               
Cow position:
               
chr16:47964702-47964954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
45, 144
               

               
Conread position:
               
925-1173
               

               
Cow position:
               
chr16:50289267-50289011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
43, 29
               

               
Conread position:
               
925-1173
               

               
Cow position:
               
chr16:51112763-51113016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
43, 107
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr16:4910408-4910673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr16:8811979-8812224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
43, 19
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr16:8933311-8933568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
42, 81
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr16:10773238-10772991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
45, 76
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr16:11615128-11615374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
34, 144
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr16:12320338-12320080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr16:13689783-13689523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr16:20069949-20069686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
46, 245
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr16:20205578-20205314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr16:29038031-29037762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
38, 24
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr16:30715621-30715354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr16:32969964-32970220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
41, 24
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr16:33226422-33226680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
43, 70
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr16:35297194-35296931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
38, 199
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr16:38243546-38243804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
34, 101
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr16:40562348-40562089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
45, 17
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr16:41590880-41590633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
138, 42
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr16:49169264-49169527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr16:51247051-51246806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
42, 68
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr16:53086224-53086471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
45, 107
               

               
Conread position:
               
926-1157
               

               
Cow position:
               
chr16:7076028-7075791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
40, 80
               

               
Conread position:
               
926-1166
               

               
Cow position:
               
chr16:36203502-36203749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
14, 24
               

               
Conread position:
               
926-1173
               

               
Cow position:
               
chr16:12633999-12633747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
41, 11
               

               
Conread position:
               
926-1173
               

               
Cow position:
               
chr16:25387089-25386842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
37, 85
               

               
Conread position:
               
926-1173
               

               
Cow position:
               
chr16:46552910-46552672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
44, 126
               

               
Conread position:
               
926-1176
               

               
Cow position:
               
chr16:7550083-7549826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
44, 142
               

               
Conread position:
               
926-1176
               

               
Cow position:
               
chr16:18353842-18354094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
39, 91
               

               
Conread position:
               
926-1176
               

               
Cow position:
               
chr16:20025557-20025305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
42, 80
               

               
Conread position:
               
926-1176
               

               
Cow position:
               
chr16:34153455-34153716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
41, 89
               

               
Conread position:
               
926-1176
               

               
Cow position:
               
chr16:39394684-39394435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
44, 20
               

               
Conread position:
               
926-1176
               

               
Cow position:
               
chr16:52133401-52133657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
40, 140
               

               
Conread position:
               
927-1127
               

               
Cow position:
               
chr16:48545935-48545728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
36, 7
               

               
Conread position:
               
927-1151
               

               
Cow position:
               
chr16:17903531-17903766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
44, 9
               

               
Conread position:
               
927-1152
               

               
Cow position:
               
chr16:30662156-30662379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
36, 9
               

               
Conread position:
               
927-1168
               

               
Cow position:
               
chr16:44584324-44584571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
37, 77
               

               
Conread position:
               
927-1176
               

               
Cow position:
               
chr16:4499543-4499293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
40, 50
               

               
Conread position:
               
927-1176
               

               
Cow position:
               
chr16:5257111-5256858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
43, 194
               

               
Conread position:
               
927-1176
               

               
Cow position:
               
chr16:11957464-11957726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
43, 9
               

               
Conread position:
               
927-1176
               

               
Cow position:
               
chr16:14758854-14758590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
16, 83
               

               
Conread position:
               
927-1176
               

               
Cow position:
               
chr16:17982028-17982284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
43, 78
               

               
Conread position:
               
927-1176
               

               
Cow position:
               
chr16:37669623-37669878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
39, 7
               

               
Conread position:
               
927-1176
               

               
Cow position:
               
chr16:42078733-42078982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
36, 76
               

               
Conread position:
               
927-1176
               

               
Cow position:
               
chr16:42242003-42242258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 138
               

               
Conread position:
               
928-1076
               

               
Cow position:
               
chr16:9578378-9578529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
39, 54
               

               
Conread position:
               
928-1107
               

               
Cow position:
               
chr16:46430039-46430223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
42, 55
               

               
Conread position:
               
928-1109
               

               
Cow position:
               
chr16:32301892-32302077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
43, 160
               

               
Conread position:
               
928-1142
               

               
Cow position:
               
chr16:10945327-10945538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
42, 14
               

               
Conread position:
               
928-1142
               

               
Cow position:
               
chr16:43674988-43674767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
39, 100
               

               
Conread position:
               
928-1168
               

               
Cow position:
               
chr16:4059469-4059221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
32, 124
               

               
Conread position:
               
928-1172
               

               
Cow position:
               
chr16:5836699-5836445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
42, 212
               

               
Conread position:
               
928-1172
               

               
Cow position:
               
chr16:8065774-8066023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
35, 141
               

               
Conread position:
               
928-1172
               

               
Cow position:
               
chr16:22380240-22380493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
40, 142
               

               
Conread position:
               
928-1173
               

               
Cow position:
               
chr16:25380381-25380635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
36, 154
               

               
Conread position:
               
928-1173
               

               
Cow position:
               
chr16:42752960-42752716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
45, 14
               

               
Conread position:
               
928-1176
               

               
Cow position:
               
chr16:238381-238124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
40, 78
               

               
Conread position:
               
928-1176
               

               
Cow position:
               
chr16:1548764-1549015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
35, 138
               

               
Conread position:
               
928-1176
               

               
Cow position:
               
chr16:5896532-5896277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
45, 100
               

               
Conread position:
               
928-1176
               

               
Cow position:
               
chr16:13195225-13195483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 56
               

               
Conread position:
               
928-1176
               

               
Cow position:
               
chr16:17627043-17626788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
40, 19
               

               
Conread position:
               
928-1176
               

               
Cow position:
               
chr16:18402800-18402543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
928-1176
               

               
Cow position:
               
chr16:23738294-23738037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 11
               

               
Conread position:
               
928-1176
               

               
Cow position:
               
chr16:32781477-32781224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
31, 78
               

               
Conread position:
               
928-1176
               

               
Cow position:
               
chr16:33198325-33198576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
37, 94
               

               
Conread position:
               
928-1176
               

               
Cow position:
               
chr16:35623136-35623383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
39, 77
               

               
Conread position:
               
928-1176
               

               
Cow position:
               
chr16:41752470-41752714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
163, 35
               

               
Conread position:
               
928-1176
               

               
Cow position:
               
chr16:52222216-52222470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
22, 49
               

               
Conread position:
               
928-1176
               

               
Cow position:
               
chr16:53508871-53509128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
42, 80
               

               
Conread position:
               
929-1072
               

               
Cow position:
               
chr16:4736474-4736619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
34, 77
               

               
Conread position:
               
929-1108
               

               
Cow position:
               
chr16:25154630-25154817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
34, 157
               

               
Conread position:
               
929-1139
               

               
Cow position:
               
chr16:30186755-30186539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
17, 22
               

               
Conread position:
               
929-1142
               

               
Cow position:
               
chr16:6270067-6269849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
38, 141
               

               
Conread position:
               
929-1147
               

               
Cow position:
               
chr16:50667403-50667173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
39, 7
               

               
Conread position:
               
929-1152
               

               
Cow position:
               
chr16:56796553-56796783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
38, 140
               

               
Conread position:
               
929-1163
               

               
Cow position:
               
chr16:54734348-54734115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
184, 126
               

               
Conread position:
               
929-1169
               

               
Cow position:
               
chr16:51598500-51598740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
38, 98
               

               
Conread position:
               
929-1172
               

               
Cow position:
               
chr16:47855051-47854805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
25, 73
               

               
Conread position:
               
929-1176
               

               
Cow position:
               
chr16:8448542-8448786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
34, 21
               

               
Conread position:
               
929-1176
               

               
Cow position:
               
chr16:11791123-11790875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
37, 77
               

               
Conread position:
               
929-1176
               

               
Cow position:
               
chr16:13611342-13611593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 7
               

               
Conread position:
               
929-1176
               

               
Cow position:
               
chr16:17745949-17745693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
34, 235
               

               
Conread position:
               
929-1176
               

               
Cow position:
               
chr16:19408415-19408658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
37, 129
               

               
Conread position:
               
929-1176
               

               
Cow position:
               
chr16:33646128-33645873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
930-1163
               

               
Cow position:
               
chr16:54664687-54664930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
37, 75
               

               
Conread position:
               
930-1176
               

               
Cow position:
               
chr16:43105404-43105655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
41, 62
               

               
Conread position:
               
930-1176
               

               
Cow position:
               
chr16:43276130-43275880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
38, 90
               

               
Conread position:
               
931-1106
               

               
Cow position:
               
chr16:55968548-55968364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
130, 39
               

               
Conread position:
               
931-1137
               

               
Cow position:
               
chr16:42176756-42176541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
39, 18
               

               
Conread position:
               
931-1176
               

               
Cow position:
               
chr16:3047231-3047483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
20, 75
               

               
Conread position:
               
931-1176
               

               
Cow position:
               
chr16:4275631-4275883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
20, 75
               

               
Conread position:
               
932-1172
               

               
Cow position:
               
chr16:11102711-11102962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
932-1172
               

               
Cow position:
               
chr16:48398144-48398389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
36, 183
               

               
Conread position:
               
932-1176
               

               
Cow position:
               
chr16:41696982-41697229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
34, 134
               

               
Conread position:
               
933-1111
               

               
Cow position:
               
chr16:12501052-12501236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
35, 57
               

               
Conread position:
               
933-1147
               

               
Cow position:
               
chr16:11940146-11939929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
26, 117
               

               
Conread position:
               
933-1168
               

               
Cow position:
               
chr16:27160755-27160989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
37, 205
               

               
Conread position:
               
933-1176
               

               
Cow position:
               
chr16:38119341-38119586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
30, 151
               

               
Conread position:
               
934-1072
               

               
Cow position:
               
chr16:11477971-11478110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
126, 15
               

               
Conread position:
               
934-1169
               

               
Cow position:
               
chr16:30135799-30136029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
127, 37
               

               
Conread position:
               
934-1173
               

               
Cow position:
               
chr16:22804490-22804730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
32, 116
               

               
Conread position:
               
934-1173
               

               
Cow position:
               
chr16:28833951-28833700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
29, 75
               

               
Conread position:
               
936-1111
               

               
Cow position:
               
chr16:38091117-38091299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
936-1130
               

               
Cow position:
               
chr16:18072278-18072078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
34, 67
               

               
Conread position:
               
936-1162
               

               
Cow position:
               
chr16:39682995-39683236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
27, 73
               

               
Conread position:
               
936-1173
               

               
Cow position:
               
chr16:16402228-16402462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
148, 27
               

               
Conread position:
               
936-1176
               

               
Cow position:
               
chr16:16597663-16597424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
32, 126
               

               
Conread position:
               
936-1176
               

               
Cow position:
               
chr16:26649523-26649771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
936-1176
               

               
Cow position:
               
chr16:32132613-32132383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
32, 58
               

               
Conread position:
               
937-1172
               

               
Cow position:
               
chr16:7456361-7456598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
146, 64
               

               
Conread position:
               
937-1172
               

               
Cow position:
               
chr16:12060521-12060279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
31, 125
               

               
Conread position:
               
937-1176
               

               
Cow position:
               
chr16:42345508-42345745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
39, 69
               

               
Conread position:
               
938-1152
               

               
Cow position:
               
chr16:26323414-26323634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
25, 71
               

               
Conread position:
               
939-1172
               

               
Cow position:
               
chr16:9905195-9904955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
7, 128
               

               
Conread position:
               
940-1172
               

               
Cow position:
               
chr16:4698886-4699118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
30, 126
               

               
Conread position:
               
940-1176
               

               
Cow position:
               
chr16:11105656-11105411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
942-1148
               

               
Cow position:
               
chr16:33869665-33869874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
21, 118
               

               
Conread position:
               
942-1166
               

               
Cow position:
               
chr16:38905134-38905361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
21, 67
               

               
Conread position:
               
942-1171
               

               
Cow position:
               
chr16:570820-571050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
27, 64
               

               
Conread position:
               
942-1176
               

               
Cow position:
               
chr16:52889312-52889550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
26, 7
               

               
Conread position:
               
942-1176
               

               
Cow position:
               
chr16:56875564-56875791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
26, 87
               

               
Conread position:
               
943-1176
               

               
Cow position:
               
chr16:11153093-11153333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
23, 69
               

               
Conread position:
               
946-1176
               

               
Cow position:
               
chr16:18141231-18141479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
20, 65
               

               
Conread position:
               
946-1176
               

               
Cow position:
               
chr16:45139762-45139530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
24, 45
               

               
Conread position:
               
949-1176
               

               
Cow position:
               
chr16:32327751-32327510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
19, 120
               

               
Conread position:
               
949-1176
               

               
Cow position:
               
chr16:53891694-53891923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
14, 85
               

               
Conread position:
               
952-1176
               

               
Cow position:
               
chr16:35758292-35758070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
15, 117
               

               
Conread position:
               
956-1176
               

               
Cow position:
               
chr16:50521562-50521336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
11, 109
               

               
Conread position:
               
957-1173
               

               
Cow position:
               
chr16:9933241-9933020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
10, 47
               

               
Conread position:
               
957-1176
               

               
Cow position:
               
chr16:13232869-13233090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
127, 13
               

               
Conread position:
               
958-1176
               

               
Cow position:
               
chr16:39646626-39646407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
10, 105
               

               
Conread position:
               
958-1176
               

               
Cow position:
               
chr16:46253605-46253832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
36, 101
               

               
Conread position:
               
961-1160
               

               
Cow position:
               
chr16:18037027-18036824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
7, 186
               

               
Conread position:
               
965-1173
               

               
Cow position:
               
chr16:4981303-4981521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
967-1110
               

               
Cow position:
               
chr16:9500593-9500443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
967-1163
               

               
Cow position:
               
chr16:46752200-46752399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
83, 172
               

               
Conread position:
               
967-1172
               

               
Cow position:
               
chr16:53553648-53553851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
85, 99
               

               
Conread position:
               
967-1173
               

               
Cow position:
               
chr16:591740-591951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
29, 38
               

               
Conread position:
               
967-1173
               

               
Cow position:
               
chr16:8279721-8279925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
46, 41
               

               
Conread position:
               
967-1173
               

               
Cow position:
               
chr16:13752061-13752263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
146, 88
               

               
Conread position:
               
967-1176
               

               
Cow position:
               
chr16:9136239-9136034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
93, 30
               

               
Conread position:
               
967-1176
               

               
Cow position:
               
chr16:45610056-45609849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
146, 60
               

               
Conread position:
               
967-1176
               

               
Cow position:
               
chr16:54342057-54341846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
23, 97
               

               
Conread position:
               
968-1121
               

               
Cow position:
               
chr16:28880009-28879857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
115, 34
               

               
Conread position:
               
968-1124
               

               
Cow position:
               
chr16:26030814-26030973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
115, 97
               

               
Conread position:
               
968-1172
               

               
Cow position:
               
chr16:35937407-35937202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
121, 34
               

               
Conread position:
               
968-1172
               

               
Cow position:
               
chr16:41763242-41763032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
968-1173
               

               
Cow position:
               
chr16:29608579-29608380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
116, 55
               

               
Conread position:
               
968-1176
               

               
Cow position:
               
chr16:24826143-24825930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
101, 92
               

               
Conread position:
               
968-1176
               

               
Cow position:
               
chr16:29557561-29557769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
112, 34
               

               
Conread position:
               
968-1176
               

               
Cow position:
               
chr16:47643484-47643275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
124, 199
               

               
Conread position:
               
969-1154
               

               
Cow position:
               
chr16:23729855-23730046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
969-1173
               

               
Cow position:
               
chr16:22860700-22860899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
140, 92
               

               
Conread position:
               
969-1176
               

               
Cow position:
               
chr16:21369553-21369341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
92, 33
               

               
Conread position:
               
971-1112
               

               
Cow position:
               
chr16:15752768-15752628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
972-1171
               

               
Cow position:
               
chr16:47384998-47385199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
110, 87
               

               
Conread position:
               
972-1176
               

               
Cow position:
               
chr16:17606364-17606154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
972-1176
               

               
Cow position:
               
chr16:24747352-24747158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
972-1176
               

               
Cow position:
               
chr16:42257514-42257305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
105, 37
               

               
Conread position:
               
973-1153
               

               
Cow position:
               
chr16:2417524-2417708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
99, 91
               

               
Conread position:
               
973-1166
               

               
Cow position:
               
chr16:30369412-30369221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
141, 91
               

               
Conread position:
               
973-1167
               

               
Cow position:
               
chr16:33267778-33267583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
111, 61
               

               
Conread position:
               
973-1168
               

               
Cow position:
               
chr16:37117139-37116937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
79, 16
               

               
Conread position:
               
973-1171
               

               
Cow position:
               
chr16:19047369-19047575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
973-1172
               

               
Cow position:
               
chr16:594159-594367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
973-1172
               

               
Cow position:
               
chr16:21450912-21450706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
973-1172
               

               
Cow position:
               
chr16:35195548-35195743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
77, 90
               

               
Conread position:
               
973-1172
               

               
Cow position:
               
chr16:44147367-44147566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
77, 149
               

               
Conread position:
               
973-1172
               

               
Cow position:
               
chr16:53048617-53048417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
77, 105
               

               
Conread position:
               
973-1176
               

               
Cow position:
               
chr16:10592496-10592293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
111, 29
               

               
Conread position:
               
973-1176
               

               
Cow position:
               
chr16:37380335-37380125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
77, 192
               

               
Conread position:
               
973-1176
               

               
Cow position:
               
chr16:44744068-44744280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
973-1176
               

               
Cow position:
               
chr16:52636319-52636522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
109, 98
               

               
Conread position:
               
973-1176
               

               
Cow position:
               
chr16:54084101-54083893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
974-1176
               

               
Cow position:
               
chr16:3246141-3246348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
974-1176
               

               
Cow position:
               
chr16:10650824-10651032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
99, 142
               

               
Conread position:
               
974-1176
               

               
Cow position:
               
chr16:24672294-24672499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
110, 30
               

               
Conread position:
               
979-1170
               

               
Cow position:
               
chr16:39238005-39237811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
104, 148
               

               
Conread position:
               
979-1172
               

               
Cow position:
               
chr16:14699977-14699781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
92, 24
               

               
Conread position:
               
979-1173
               

               
Cow position:
               
chr16:11568064-11568256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
90, 23
               

               
Conread position:
               
982-1157
               

               
Cow position:
               
chr16:30515533-30515714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
87, 78
               

               
Conread position:
               
982-1176
               

               
Cow position:
               
chr16:45535231-45535038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
131, 20
               

               
Conread position:
               
985-1176
               

               
Cow position:
               
chr16:54287918-54287729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
83, 14
               

               
Conread position:
               
987-1176
               

               
Cow position:
               
chr16:4145114-4144922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
96, 39
               

               
Conread position:
               
987-1176
               

               
Cow position:
               
chr16:49404108-49404293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
86, 123
               

               
Conread position:
               
988-1176
               

               
Cow position:
               
chr16:30143156-30143351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
96, 78
               

               
Conread position:
               
989-1172
               

               
Cow position:
               
chr16:26702865-26703056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
997-1172
               

               
Cow position:
               
chr16:26342307-26342136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
116, 64
               

               
Conread position:
               
1003-1176
               

               
Cow position:
               
chr16:13791552-13791375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
1004-1166
               

               
Cow position:
               
chr16:24228318-24228482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
111, 70
               

               
Conread position:
               
1004-1167
               

               
Cow position:
               
chr16:7496231-7496065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
1004-1173
               

               
Cow position:
               
chr16:48369915-48370086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
74, 125
               

               
Conread position:
               
1004-1176
               

               
Cow position:
               
chr16:4372459-4372636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
1004-1176
               

               
Cow position:
               
chr16:27249438-27249268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
88, 71
               

               
Conread position:
               
1004-1176
               

               
Cow position:
               
chr16:44676908-44676731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
1007-1172
               

               
Cow position:
               
chr16:13973255-13973419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
54, 110
               

               
Conread position:
               
1009-1173
               

               
Cow position:
               
chr16:33230106-33229935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
1009-1173
               

               
Cow position:
               
chr16:53595494-53595659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
97, 65
               

               
Conread position:
               
1011-1176
               

               
Cow position:
               
chr16:24148188-24148016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
1011-1176
               

               
Cow position:
               
chr16:55308514-55308675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
1011-1176
               

               
Cow position:
               
chr16:56912686-56912859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
1014-1176
               

               
Cow position:
               
chr16:22868154-22868317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
99, 54
               

               
Conread position:
               
1014-1176
               

               
Cow position:
               
chr16:30706131-30705968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
103, 50
               

               
Conread position:
               
1015-1173
               

               
Cow position:
               
chr16:4712923-4712761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
53, 71
               

               
Conread position:
               
1015-1173
               

               
Cow position:
               
chr16:35168753-35168590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
1018-1171
               

               
Cow position:
               
chr16:39417100-39417254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
51, 65
               

               
Conread position:
               
1019-1173
               

               
Cow position:
               
chr16:16424591-16424742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
98, 35
               

               
Conread position:
               
1020-1173
               

               
Cow position:
               
chr16:42092370-42092522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
64, 45
               

               
Conread position:
               
1020-1176
               

               
Cow position:
               
chr16:16280430-16280587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
103, 55
               

               
Conread position:
               
1021-1167
               

               
Cow position:
               
chr16:26501175-26501024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
1021-1176
               

               
Cow position:
               
chr16:8807076-8807233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
88, 60
               

               
Conread position:
               
1021-1176
               

               
Cow position:
               
chr16:29067178-29067026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
63, 40
               

               
Conread position:
               
1022-1176
               

               
Cow position:
               
chr16:44973510-44973353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
60, 43
               

               
Conread position:
               
1024-1166
               

               
Cow position:
               
chr16:26068946-26068800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
38, 50
               

               
Conread position:
               
1024-1176
               

               
Cow position:
               
chr16:4103148-4103300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
60, 24
               

               
Conread position:
               
1025-1176
               

               
Cow position:
               
chr16:47620392-47620239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
57, 38
               

               
Conread position:
               
1028-1176
               

               
Cow position:
               
chr16:31159562-31159715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
34, 59
               

               
Conread position:
               
1029-1173
               

               
Cow position:
               
chr16:14028620-14028765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
55, 36
               

               
Conread position:
               
1034-1173
               

               
Cow position:
               
chr16:30209754-30209616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
81, 31
               

               
Conread position:
               
1037-1176
               

               
Cow position:
               
chr16:25287690-25287829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
23, 35
               
Show alignments to all cow chromosomes.