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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8053H07.3
        

               
Conread position:
               
771-1176
               

               
Cow position:
               
chr21:13755113-13754715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
7, 58
               

               
Conread position:
               
797-1173
               

               
Cow position:
               
chr21:18941531-18941905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
21, 9
               

               
Conread position:
               
808-1041
               

               
Cow position:
               
chr21:12298905-12298656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
30, 43
               

               
Conread position:
               
825-1176
               

               
Cow position:
               
chr21:31662278-31661927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
145, 34
               

               
Conread position:
               
827-1152
               

               
Cow position:
               
chr21:976853-977198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
62, 18
               

               
Conread position:
               
829-1176
               

               
Cow position:
               
chr21:31576761-31576432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
59, 8
               

               
Conread position:
               
831-1176
               

               
Cow position:
               
chr21:39888454-39888826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
45, 269
               

               
Conread position:
               
834-1176
               

               
Cow position:
               
chr21:32574989-32574640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
64, 14
               

               
Conread position:
               
838-1150
               

               
Cow position:
               
chr21:28919245-28919576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
60, 146
               

               
Conread position:
               
838-1176
               

               
Cow position:
               
chr21:23587157-23586802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 21
               

               
Conread position:
               
839-1171
               

               
Cow position:
               
chr21:33413812-33414158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 205
               

               
Conread position:
               
843-1162
               

               
Cow position:
               
chr21:47715283-47715608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
52, 85
               

               
Conread position:
               
846-1112
               

               
Cow position:
               
chr21:6388247-6387988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
124, 13
               

               
Conread position:
               
846-1156
               

               
Cow position:
               
chr21:3254415-3254093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
16, 85
               

               
Conread position:
               
846-1171
               

               
Cow position:
               
chr21:23786288-23785956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
42, 23
               

               
Conread position:
               
847-1150
               

               
Cow position:
               
chr21:10823817-10823515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
46, 79
               

               
Conread position:
               
848-1079
               

               
Cow position:
               
chr21:6696761-6696996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
47, 11
               

               
Conread position:
               
848-1176
               

               
Cow position:
               
chr21:10673387-10673053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 227
               

               
Conread position:
               
849-1121
               

               
Cow position:
               
chr21:37235639-37235362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
20, 47
               

               
Conread position:
               
850-1173
               

               
Cow position:
               
chr21:12087849-12087518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
45, 21
               

               
Conread position:
               
850-1176
               

               
Cow position:
               
chr21:6998219-6997860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
16, 240
               

               
Conread position:
               
850-1176
               

               
Cow position:
               
chr21:17184191-17183842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
48, 9
               

               
Conread position:
               
850-1176
               

               
Cow position:
               
chr21:27863243-27863594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
851-1034
               

               
Cow position:
               
chr21:2413303-2413120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
116, 43
               

               
Conread position:
               
851-1097
               

               
Cow position:
               
chr21:12104626-12104367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
46, 225
               

               
Conread position:
               
851-1162
               

               
Cow position:
               
chr21:12339889-12339575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
45, 8
               

               
Conread position:
               
851-1163
               

               
Cow position:
               
chr21:4281609-4281937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
17, 134
               

               
Conread position:
               
851-1172
               

               
Cow position:
               
chr21:47713755-47714081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
25, 55
               

               
Conread position:
               
852-1131
               

               
Cow position:
               
chr21:31159658-31159376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
43, 150
               

               
Conread position:
               
852-1172
               

               
Cow position:
               
chr21:4723734-4723408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
43, 83
               

               
Conread position:
               
852-1176
               

               
Cow position:
               
chr21:37014153-37014481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
46, 136
               

               
Conread position:
               
853-1072
               

               
Cow position:
               
chr21:46451702-46451922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
74, 6
               

               
Conread position:
               
853-1173
               

               
Cow position:
               
chr21:46551854-46552181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 57
               

               
Conread position:
               
853-1176
               

               
Cow position:
               
chr21:15741831-15742177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
13, 84
               

               
Conread position:
               
853-1176
               

               
Cow position:
               
chr21:25764886-25764560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
45, 6
               

               
Conread position:
               
854-1152
               

               
Cow position:
               
chr21:5465017-5464693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
41, 195
               

               
Conread position:
               
854-1165
               

               
Cow position:
               
chr21:32559101-32559426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
43, 215
               

               
Conread position:
               
854-1170
               

               
Cow position:
               
chr21:38449181-38449519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
15, 166
               

               
Conread position:
               
854-1176
               

               
Cow position:
               
chr21:17428749-17428424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
14, 75
               

               
Conread position:
               
854-1176
               

               
Cow position:
               
chr21:25800646-25800317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
113, 41
               

               
Conread position:
               
854-1176
               

               
Cow position:
               
chr21:40134416-40134082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
43, 103
               

               
Conread position:
               
855-1176
               

               
Cow position:
               
chr21:15911647-15911321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 69
               

               
Conread position:
               
856-1081
               

               
Cow position:
               
chr21:18135620-18135853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
28, 75
               

               
Conread position:
               
856-1115
               

               
Cow position:
               
chr21:44565459-44565735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
7, 161
               

               
Conread position:
               
856-1130
               

               
Cow position:
               
chr21:13395849-13395566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
66, 219
               

               
Conread position:
               
856-1173
               

               
Cow position:
               
chr21:5898141-5898474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 23
               

               
Conread position:
               
856-1173
               

               
Cow position:
               
chr21:32339477-32339813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 217
               

               
Conread position:
               
856-1173
               

               
Cow position:
               
chr21:38901033-38900703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 93
               

               
Conread position:
               
856-1173
               

               
Cow position:
               
chr21:45356083-45355761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 79
               

               
Conread position:
               
856-1174
               

               
Cow position:
               
chr21:4280418-4280748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
7, 109
               

               
Conread position:
               
856-1176
               

               
Cow position:
               
chr21:4099115-4098791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 69
               

               
Conread position:
               
856-1176
               

               
Cow position:
               
chr21:5427195-5426861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
38, 217
               

               
Conread position:
               
856-1176
               

               
Cow position:
               
chr21:7673382-7673048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
15, 163
               

               
Conread position:
               
856-1176
               

               
Cow position:
               
chr21:8207025-8206694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 288
               

               
Conread position:
               
856-1176
               

               
Cow position:
               
chr21:9939940-9940272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 71
               

               
Conread position:
               
856-1176
               

               
Cow position:
               
chr21:20418436-20418763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
12, 74
               

               
Conread position:
               
856-1176
               

               
Cow position:
               
chr21:33727212-33727542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 71
               

               
Conread position:
               
856-1176
               

               
Cow position:
               
chr21:33791129-33791447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
79, 32
               

               
Conread position:
               
856-1176
               

               
Cow position:
               
chr21:33982546-33982883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
42, 165
               

               
Conread position:
               
856-1176
               

               
Cow position:
               
chr21:33996982-33997304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 107
               

               
Conread position:
               
859-1016
               

               
Cow position:
               
chr21:49661594-49661750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
105, 63
               

               
Conread position:
               
859-1044
               

               
Cow position:
               
chr21:26735662-26735466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
39, 157
               

               
Conread position:
               
859-1109
               

               
Cow position:
               
chr21:7768691-7768425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
68, 30
               

               
Conread position:
               
859-1126
               

               
Cow position:
               
chr21:42209380-42209659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
35, 85
               

               
Conread position:
               
859-1147
               

               
Cow position:
               
chr21:44860875-44861163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
71, 29
               

               
Conread position:
               
859-1167
               

               
Cow position:
               
chr21:641849-641514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
859-1168
               

               
Cow position:
               
chr21:12154390-12154067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
34, 120
               

               
Conread position:
               
859-1173
               

               
Cow position:
               
chr21:4400058-4399722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 195
               

               
Conread position:
               
859-1173
               

               
Cow position:
               
chr21:25286760-25286438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
39, 77
               

               
Conread position:
               
859-1173
               

               
Cow position:
               
chr21:49471221-49470916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
117, 39
               

               
Conread position:
               
859-1176
               

               
Cow position:
               
chr21:22352990-22353309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
10, 69
               

               
Conread position:
               
859-1176
               

               
Cow position:
               
chr21:31662712-31662386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 18
               

               
Conread position:
               
859-1176
               

               
Cow position:
               
chr21:44754543-44754851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
36, 69
               

               
Conread position:
               
859-1176
               

               
Cow position:
               
chr21:46241994-46242315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 68
               

               
Conread position:
               
860-1125
               

               
Cow position:
               
chr21:26753732-26753469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
35, 8
               

               
Conread position:
               
860-1131
               

               
Cow position:
               
chr21:18064662-18064946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
25, 192
               

               
Conread position:
               
860-1161
               

               
Cow position:
               
chr21:23397607-23397908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
33, 60
               

               
Conread position:
               
860-1161
               

               
Cow position:
               
chr21:45970915-45971236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
33, 176
               

               
Conread position:
               
860-1165
               

               
Cow position:
               
chr21:12301266-12301573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 67
               

               
Conread position:
               
860-1167
               

               
Cow position:
               
chr21:44214375-44214055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 150
               

               
Conread position:
               
860-1172
               

               
Cow position:
               
chr21:28244731-28244395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
38, 184
               

               
Conread position:
               
860-1173
               

               
Cow position:
               
chr21:23800888-23801203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 33
               

               
Conread position:
               
860-1176
               

               
Cow position:
               
chr21:957933-957594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 174
               

               
Conread position:
               
860-1176
               

               
Cow position:
               
chr21:30222606-30222266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
861-1109
               

               
Cow position:
               
chr21:674931-674675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
35, 65
               

               
Conread position:
               
861-1131
               

               
Cow position:
               
chr21:8438593-8438858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
78, 28
               

               
Conread position:
               
861-1160
               

               
Cow position:
               
chr21:8426706-8426379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
33, 221
               

               
Conread position:
               
861-1163
               

               
Cow position:
               
chr21:46607349-46607648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
31, 66
               

               
Conread position:
               
861-1171
               

               
Cow position:
               
chr21:46972902-46973203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
16, 37
               

               
Conread position:
               
861-1172
               

               
Cow position:
               
chr21:27229540-27229868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
37, 104
               

               
Conread position:
               
861-1173
               

               
Cow position:
               
chr21:82322-82004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
62, 38
               

               
Conread position:
               
861-1173
               

               
Cow position:
               
chr21:20262084-20262408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
35, 192
               

               
Conread position:
               
861-1173
               

               
Cow position:
               
chr21:30592051-30592379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
37, 171
               

               
Conread position:
               
861-1173
               

               
Cow position:
               
chr21:38121342-38121026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 57
               

               
Conread position:
               
861-1173
               

               
Cow position:
               
chr21:46848869-46849201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 169
               

               
Conread position:
               
861-1176
               

               
Cow position:
               
chr21:802060-802373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
40, 212
               

               
Conread position:
               
861-1176
               

               
Cow position:
               
chr21:4276359-4276666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
37, 66
               

               
Conread position:
               
862-1132
               

               
Cow position:
               
chr21:28030541-28030258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
56, 150
               

               
Conread position:
               
862-1171
               

               
Cow position:
               
chr21:16570151-16569828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
28, 54
               

               
Conread position:
               
862-1176
               

               
Cow position:
               
chr21:18041626-18041926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
82, 36
               

               
Conread position:
               
863-1150
               

               
Cow position:
               
chr21:36910998-36910688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
35, 222
               

               
Conread position:
               
863-1151
               

               
Cow position:
               
chr21:36371723-36371434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
28, 68
               

               
Conread position:
               
863-1159
               

               
Cow position:
               
chr21:8349583-8349267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
33, 156
               

               
Conread position:
               
865-1176
               

               
Cow position:
               
chr21:22121761-22121444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
33, 155
               

               
Conread position:
               
867-1167
               

               
Cow position:
               
chr21:30848691-30849017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
867-1170
               

               
Cow position:
               
chr21:15543982-15544290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 148
               

               
Conread position:
               
867-1172
               

               
Cow position:
               
chr21:34740083-34739772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 60
               

               
Conread position:
               
867-1173
               

               
Cow position:
               
chr21:3236760-3236449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
31, 112
               

               
Conread position:
               
867-1173
               

               
Cow position:
               
chr21:49649854-49649559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
106, 66
               

               
Conread position:
               
867-1176
               

               
Cow position:
               
chr21:21223519-21223215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
28, 57
               

               
Conread position:
               
868-1176
               

               
Cow position:
               
chr21:34564982-34565287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
103, 27
               

               
Conread position:
               
869-1176
               

               
Cow position:
               
chr21:1059313-1058999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 20
               

               
Conread position:
               
869-1176
               

               
Cow position:
               
chr21:24598898-24598583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
27, 138
               

               
Conread position:
               
872-1176
               

               
Cow position:
               
chr21:22861244-22860921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
26, 84
               

               
Conread position:
               
873-1176
               

               
Cow position:
               
chr21:34151827-34151502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
45, 95
               

               
Conread position:
               
873-1176
               

               
Cow position:
               
chr21:41107525-41107840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
26, 196
               

               
Conread position:
               
876-1173
               

               
Cow position:
               
chr21:28810027-28810342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
17, 200
               

               
Conread position:
               
878-1176
               

               
Cow position:
               
chr21:6051725-6051429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
92, 32
               

               
Conread position:
               
878-1176
               

               
Cow position:
               
chr21:40769512-40769231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
87, 20
               

               
Conread position:
               
884-1168
               

               
Cow position:
               
chr21:37706197-37706485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
79, 18
               

               
Conread position:
               
884-1172
               

               
Cow position:
               
chr21:10264250-10263959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
79, 26
               

               
Conread position:
               
884-1173
               

               
Cow position:
               
chr21:11644751-11645045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
75, 26
               

               
Conread position:
               
884-1173
               

               
Cow position:
               
chr21:27145773-27146066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
30, 26
               

               
Conread position:
               
884-1176
               

               
Cow position:
               
chr21:30231481-30231776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
60, 25
               

               
Conread position:
               
891-1172
               

               
Cow position:
               
chr21:42413886-42414174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 19
               

               
Conread position:
               
892-1176
               

               
Cow position:
               
chr21:10410432-10410140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
18, 23
               

               
Conread position:
               
894-1113
               

               
Cow position:
               
chr21:13036698-13036913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
71, 25
               

               
Conread position:
               
894-1176
               

               
Cow position:
               
chr21:35997379-35997095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
73, 37
               

               
Conread position:
               
904-1173
               

               
Cow position:
               
chr21:29485178-29484904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
61, 5
               

               
Conread position:
               
904-1174
               

               
Cow position:
               
chr21:24858513-24858239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
67, 5
               

               
Conread position:
               
923-1173
               

               
Cow position:
               
chr21:33264025-33263774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
923-1176
               

               
Cow position:
               
chr21:19259000-19258751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
45, 83
               

               
Conread position:
               
923-1176
               

               
Cow position:
               
chr21:22210066-22210322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
47, 13
               

               
Conread position:
               
924-1080
               

               
Cow position:
               
chr21:46470364-46470209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
43, 82
               

               
Conread position:
               
924-1135
               

               
Cow position:
               
chr21:29014378-29014597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
39, 133
               

               
Conread position:
               
924-1168
               

               
Cow position:
               
chr21:30256093-30256340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
148, 47
               

               
Conread position:
               
924-1170
               

               
Cow position:
               
chr21:40266302-40266049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
19, 26
               

               
Conread position:
               
924-1172
               

               
Cow position:
               
chr21:37299643-37299395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
46, 182
               

               
Conread position:
               
924-1172
               

               
Cow position:
               
chr21:44671925-44671683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
43, 73
               

               
Conread position:
               
924-1172
               

               
Cow position:
               
chr21:45262630-45262886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
35, 10
               

               
Conread position:
               
924-1173
               

               
Cow position:
               
chr21:643504-643253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
39, 10
               

               
Conread position:
               
924-1173
               

               
Cow position:
               
chr21:9416429-9416171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
43, 16
               

               
Conread position:
               
924-1173
               

               
Cow position:
               
chr21:30606915-30607171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
62, 37
               

               
Conread position:
               
924-1173
               

               
Cow position:
               
chr21:36297674-36297415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
924-1176
               

               
Cow position:
               
chr21:724708-724964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
157, 80
               

               
Conread position:
               
924-1176
               

               
Cow position:
               
chr21:20153134-20152869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
924-1176
               

               
Cow position:
               
chr21:28924290-28924036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
46, 150
               

               
Conread position:
               
924-1176
               

               
Cow position:
               
chr21:29001976-29002236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
924-1176
               

               
Cow position:
               
chr21:42007281-42007544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
44, 106
               

               
Conread position:
               
925-1069
               

               
Cow position:
               
chr21:41610350-41610199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
925-1109
               

               
Cow position:
               
chr21:30980398-30980587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
40, 78
               

               
Conread position:
               
925-1124
               

               
Cow position:
               
chr21:10538075-10538276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
42, 161
               

               
Conread position:
               
925-1151
               

               
Cow position:
               
chr21:7377746-7377982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
37, 144
               

               
Conread position:
               
925-1154
               

               
Cow position:
               
chr21:43259399-43259166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
28, 150
               

               
Conread position:
               
925-1168
               

               
Cow position:
               
chr21:44251663-44251905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
38, 192
               

               
Conread position:
               
925-1170
               

               
Cow position:
               
chr21:1511469-1511219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
45, 81
               

               
Conread position:
               
925-1171
               

               
Cow position:
               
chr21:14760745-14760500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
43, 104
               

               
Conread position:
               
925-1171
               

               
Cow position:
               
chr21:40589302-40589552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
45, 146
               

               
Conread position:
               
925-1172
               

               
Cow position:
               
chr21:11360206-11359965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
159, 39
               

               
Conread position:
               
925-1173
               

               
Cow position:
               
chr21:47220-46962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
925-1173
               

               
Cow position:
               
chr21:10151985-10151718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
925-1173
               

               
Cow position:
               
chr21:25628733-25628988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
42, 9
               

               
Conread position:
               
925-1173
               

               
Cow position:
               
chr21:26245094-26244845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 159
               

               
Conread position:
               
925-1173
               

               
Cow position:
               
chr21:28191212-28190957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
40, 97
               

               
Conread position:
               
925-1173
               

               
Cow position:
               
chr21:29069146-29069404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
925-1173
               

               
Cow position:
               
chr21:30835543-30835287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
43, 96
               

               
Conread position:
               
925-1173
               

               
Cow position:
               
chr21:36910111-36909859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
42, 132
               

               
Conread position:
               
925-1173
               

               
Cow position:
               
chr21:41579936-41579676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
925-1174
               

               
Cow position:
               
chr21:10114155-10114407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
38, 29
               

               
Conread position:
               
925-1175
               

               
Cow position:
               
chr21:33899-33643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
38, 149
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr21:396047-395792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
41, 93
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr21:2657989-2657742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
21, 26
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr21:3818388-3818129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
40, 143
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr21:7581725-7581984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
42, 136
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr21:9990690-9990438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
34, 131
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr21:10001255-10000996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
38, 84
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr21:10004706-10004963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
38, 72
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr21:11739940-11740194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
48, 212
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr21:13365522-13365260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
45, 93
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr21:15976812-15976554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
45, 133
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr21:16152621-16152353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr21:18800354-18800607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
35, 165
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr21:22465370-22465119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
40, 24
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr21:23321898-23322158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr21:24642692-24642440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
158, 39
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr21:26647836-26648085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
38, 17
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr21:27624878-27624631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
38, 136
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr21:28626417-28626162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
38, 88
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr21:29978580-29978834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 209
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr21:33350921-33350668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
43, 153
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr21:34010218-34010474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
44, 17
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr21:42135436-42135698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr21:42384686-42384431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
42, 11
               

               
Conread position:
               
925-1176
               

               
Cow position:
               
chr21:49699860-49700114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
37, 122
               

               
Conread position:
               
926-1155
               

               
Cow position:
               
chr21:868745-868982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
39, 170
               

               
Conread position:
               
926-1175
               

               
Cow position:
               
chr21:45920880-45921136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
41, 16
               

               
Conread position:
               
926-1176
               

               
Cow position:
               
chr21:938196-937956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
37, 16
               

               
Conread position:
               
926-1176
               

               
Cow position:
               
chr21:12461787-12462048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
926-1176
               

               
Cow position:
               
chr21:14464762-14464501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
37, 121
               

               
Conread position:
               
927-1142
               

               
Cow position:
               
chr21:24698658-24698436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
31, 218
               

               
Conread position:
               
927-1171
               

               
Cow position:
               
chr21:41974200-41974448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
41, 96
               

               
Conread position:
               
927-1173
               

               
Cow position:
               
chr21:10633463-10633716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
39, 27
               

               
Conread position:
               
927-1173
               

               
Cow position:
               
chr21:45473581-45473832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
40, 7
               

               
Conread position:
               
927-1173
               

               
Cow position:
               
chr21:47763941-47764190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
41, 7
               

               
Conread position:
               
927-1176
               

               
Cow position:
               
chr21:12723328-12723082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
41, 9
               

               
Conread position:
               
928-1130
               

               
Cow position:
               
chr21:17642809-17643012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
40, 14
               

               
Conread position:
               
928-1131
               

               
Cow position:
               
chr21:13588936-13588728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
35, 21
               

               
Conread position:
               
928-1168
               

               
Cow position:
               
chr21:18779799-18780043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
39, 102
               

               
Conread position:
               
928-1168
               

               
Cow position:
               
chr21:45329773-45330018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
42, 83
               

               
Conread position:
               
928-1172
               

               
Cow position:
               
chr21:25383203-25382939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
39, 138
               

               
Conread position:
               
928-1172
               

               
Cow position:
               
chr21:47719126-47719373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
45, 14
               

               
Conread position:
               
928-1173
               

               
Cow position:
               
chr21:28989790-28989539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
40, 61
               

               
Conread position:
               
928-1176
               

               
Cow position:
               
chr21:3585191-3585441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
38, 141
               

               
Conread position:
               
928-1176
               

               
Cow position:
               
chr21:6834224-6833970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
27, 14
               

               
Conread position:
               
928-1176
               

               
Cow position:
               
chr21:13127922-13128172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
42, 29
               

               
Conread position:
               
928-1176
               

               
Cow position:
               
chr21:16982044-16981800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
45, 12
               

               
Conread position:
               
928-1176
               

               
Cow position:
               
chr21:24888168-24887934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
28, 41
               

               
Conread position:
               
928-1176
               

               
Cow position:
               
chr21:28733736-28733990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
40, 99
               

               
Conread position:
               
928-1176
               

               
Cow position:
               
chr21:28993454-28993700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
126, 39
               

               
Conread position:
               
928-1176
               

               
Cow position:
               
chr21:30250028-30250268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
42, 14
               

               
Conread position:
               
928-1176
               

               
Cow position:
               
chr21:36795780-36795522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
928-1176
               

               
Cow position:
               
chr21:41156047-41155785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
35, 185
               

               
Conread position:
               
928-1176
               

               
Cow position:
               
chr21:41597988-41597741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
35, 141
               

               
Conread position:
               
929-1104
               

               
Cow position:
               
chr21:1764703-1764868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
27, 33
               

               
Conread position:
               
929-1113
               

               
Cow position:
               
chr21:9862399-9862581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
127, 30
               

               
Conread position:
               
929-1152
               

               
Cow position:
               
chr21:6624333-6624106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
34, 80
               

               
Conread position:
               
929-1152
               

               
Cow position:
               
chr21:17890478-17890249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
34, 71
               

               
Conread position:
               
929-1172
               

               
Cow position:
               
chr21:8527310-8527551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
9, 156
               

               
Conread position:
               
929-1176
               

               
Cow position:
               
chr21:18790390-18790638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
41, 81
               

               
Conread position:
               
929-1176
               

               
Cow position:
               
chr21:20160852-20160605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
34, 146
               

               
Conread position:
               
929-1176
               

               
Cow position:
               
chr21:31090260-31090498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
30, 5
               

               
Conread position:
               
929-1176
               

               
Cow position:
               
chr21:33563179-33562935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
39, 63
               

               
Conread position:
               
929-1176
               

               
Cow position:
               
chr21:44825710-44825963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
41, 192
               

               
Conread position:
               
930-1106
               

               
Cow position:
               
chr21:46132749-46132569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
40, 144
               

               
Conread position:
               
930-1163
               

               
Cow position:
               
chr21:10514976-10514739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
65, 16
               

               
Conread position:
               
930-1173
               

               
Cow position:
               
chr21:1591722-1591477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 22
               

               
Conread position:
               
931-1151
               

               
Cow position:
               
chr21:22014364-22014132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
34, 168
               

               
Conread position:
               
931-1176
               

               
Cow position:
               
chr21:45915544-45915785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
37, 75
               

               
Conread position:
               
933-1070
               

               
Cow position:
               
chr21:12207630-12207772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
933-1135
               

               
Cow position:
               
chr21:40192133-40192338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
37, 9
               

               
Conread position:
               
933-1166
               

               
Cow position:
               
chr21:23672917-23672684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
35, 80
               

               
Conread position:
               
933-1167
               

               
Cow position:
               
chr21:8235390-8235621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
34, 73
               

               
Conread position:
               
933-1176
               

               
Cow position:
               
chr21:37344929-37345179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
34, 107
               

               
Conread position:
               
933-1176
               

               
Cow position:
               
chr21:42841425-42841676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
35, 214
               

               
Conread position:
               
934-1130
               

               
Cow position:
               
chr21:734760-734564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
36, 55
               

               
Conread position:
               
934-1152
               

               
Cow position:
               
chr21:47363563-47363792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
935-1160
               

               
Cow position:
               
chr21:11779372-11779592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
32, 47
               

               
Conread position:
               
935-1176
               

               
Cow position:
               
chr21:31253703-31253465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
33, 73
               

               
Conread position:
               
936-1176
               

               
Cow position:
               
chr21:20260150-20260399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
6, 15
               

               
Conread position:
               
936-1176
               

               
Cow position:
               
chr21:23980013-23980260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
27, 141
               

               
Conread position:
               
936-1176
               

               
Cow position:
               
chr21:35354702-35354455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
23, 117
               

               
Conread position:
               
936-1176
               

               
Cow position:
               
chr21:42022444-42022212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
37, 120
               

               
Conread position:
               
936-1176
               

               
Cow position:
               
chr21:46264339-46264094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
32, 97
               

               
Conread position:
               
937-1126
               

               
Cow position:
               
chr21:13584893-13585080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
31, 95
               

               
Conread position:
               
937-1171
               

               
Cow position:
               
chr21:2679716-2679483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
126, 12
               

               
Conread position:
               
937-1176
               

               
Cow position:
               
chr21:12801579-12801825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
29, 186
               

               
Conread position:
               
937-1176
               

               
Cow position:
               
chr21:30990119-30990348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
33, 67
               

               
Conread position:
               
940-1176
               

               
Cow position:
               
chr21:18844847-18845093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
26, 198
               

               
Conread position:
               
942-1163
               

               
Cow position:
               
chr21:2809999-2810227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
25, 72
               

               
Conread position:
               
942-1173
               

               
Cow position:
               
chr21:17875030-17875267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
21, 145
               

               
Conread position:
               
942-1175
               

               
Cow position:
               
chr21:5392372-5392616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
23, 229
               

               
Conread position:
               
942-1176
               

               
Cow position:
               
chr21:14452397-14452158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
21, 128
               

               
Conread position:
               
943-1107
               

               
Cow position:
               
chr21:20183233-20183064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
25, 132
               

               
Conread position:
               
944-1176
               

               
Cow position:
               
chr21:10561422-10561662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
26, 119
               

               
Conread position:
               
947-1168
               

               
Cow position:
               
chr21:41878627-41878401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
26, 131
               

               
Conread position:
               
949-1173
               

               
Cow position:
               
chr21:19363304-19363538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
963-1163
               

               
Cow position:
               
chr21:17929698-17929907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
966-1176
               

               
Cow position:
               
chr21:29214025-29214229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
152, 0
               

               
Conread position:
               
967-1157
               

               
Cow position:
               
chr21:18059827-18060016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
28, 38
               

               
Conread position:
               
967-1172
               

               
Cow position:
               
chr21:4998361-4998561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
146, 66
               

               
Conread position:
               
967-1174
               

               
Cow position:
               
chr21:19673940-19673728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
967-1176
               

               
Cow position:
               
chr21:11251003-11250791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
150, 35
               

               
Conread position:
               
967-1176
               

               
Cow position:
               
chr21:15584285-15584497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
116, 97
               

               
Conread position:
               
968-1172
               

               
Cow position:
               
chr21:25127737-25127527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
968-1173
               

               
Cow position:
               
chr21:10601242-10601449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
100, 146
               

               
Conread position:
               
968-1173
               

               
Cow position:
               
chr21:20193027-20192822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
116, 34
               

               
Conread position:
               
968-1173
               

               
Cow position:
               
chr21:39403392-39403612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
968-1176
               

               
Cow position:
               
chr21:18828169-18828384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
108, 181
               

               
Conread position:
               
968-1176
               

               
Cow position:
               
chr21:34390842-34391053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
116, 102
               

               
Conread position:
               
968-1176
               

               
Cow position:
               
chr21:39401723-39401516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
85, 15
               

               
Conread position:
               
968-1176
               

               
Cow position:
               
chr21:42540089-42540294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
101, 134
               

               
Conread position:
               
968-1176
               

               
Cow position:
               
chr21:44515397-44515185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
108, 97
               

               
Conread position:
               
969-1151
               

               
Cow position:
               
chr21:46144091-46143905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
969-1153
               

               
Cow position:
               
chr21:9302295-9302482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
114, 70
               

               
Conread position:
               
969-1173
               

               
Cow position:
               
chr21:16187675-16187883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
112, 137
               

               
Conread position:
               
969-1176
               

               
Cow position:
               
chr21:18850092-18850304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
44, 202
               

               
Conread position:
               
969-1176
               

               
Cow position:
               
chr21:43357124-43357339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
99, 49
               

               
Conread position:
               
971-1173
               

               
Cow position:
               
chr21:33359912-33360109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
5, 15
               

               
Conread position:
               
972-1176
               

               
Cow position:
               
chr21:32904025-32904233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
100, 57
               

               
Conread position:
               
973-1168
               

               
Cow position:
               
chr21:33729558-33729363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
28, 32
               

               
Conread position:
               
973-1168
               

               
Cow position:
               
chr21:40432573-40432379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
140, 92
               

               
Conread position:
               
973-1170
               

               
Cow position:
               
chr21:36789923-36789725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
87, 163
               

               
Conread position:
               
973-1172
               

               
Cow position:
               
chr21:10007511-10007712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
78, 165
               

               
Conread position:
               
973-1172
               

               
Cow position:
               
chr21:13048065-13048271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
973-1172
               

               
Cow position:
               
chr21:13488655-13488448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
973-1172
               

               
Cow position:
               
chr21:18155438-18155644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
973-1172
               

               
Cow position:
               
chr21:40786805-40786600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
97, 16
               

               
Conread position:
               
973-1172
               

               
Cow position:
               
chr21:46141176-46140967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
973-1172
               

               
Cow position:
               
chr21:48176948-48176754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
142, 29
               

               
Conread position:
               
974-1171
               

               
Cow position:
               
chr21:40899466-40899267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
143, 90
               

               
Conread position:
               
975-1176
               

               
Cow position:
               
chr21:17856670-17856469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
102, 168
               

               
Conread position:
               
976-1176
               

               
Cow position:
               
chr21:5636595-5636796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
52, 89
               

               
Conread position:
               
979-1176
               

               
Cow position:
               
chr21:10727399-10727199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
14, 26
               

               
Conread position:
               
982-1176
               

               
Cow position:
               
chr21:10118678-10118479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
99, 61
               

               
Conread position:
               
985-1173
               

               
Cow position:
               
chr21:24222421-24222613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
986-1176
               

               
Cow position:
               
chr21:46829157-46829348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
88, 105
               

               
Conread position:
               
994-1171
               

               
Cow position:
               
chr21:2260259-2260434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
90, 10
               

               
Conread position:
               
994-1173
               

               
Cow position:
               
chr21:13495649-13495465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
73, 15
               

               
Conread position:
               
995-1173
               

               
Cow position:
               
chr21:32536082-32535901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
67, 9
               

               
Conread position:
               
997-1176
               

               
Cow position:
               
chr21:30150159-30150344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
998-1172
               

               
Cow position:
               
chr21:3380975-3381159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
1003-1167
               

               
Cow position:
               
chr21:47802159-47802326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
10, 87
               

               
Conread position:
               
1003-1172
               

               
Cow position:
               
chr21:9847912-9848066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
1003-1176
               

               
Cow position:
               
chr21:3813385-3813561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
80, 62
               

               
Conread position:
               
1003-1176
               

               
Cow position:
               
chr21:13738658-13738490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
1004-1163
               

               
Cow position:
               
chr21:6102164-6102324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
78, 60
               

               
Conread position:
               
1005-1173
               

               
Cow position:
               
chr21:17175243-17175071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
108, 57
               

               
Conread position:
               
1008-1173
               

               
Cow position:
               
chr21:34722695-34722861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
74, 54
               

               
Conread position:
               
1011-1176
               

               
Cow position:
               
chr21:39450071-39450243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
50, 55
               

               
Conread position:
               
1012-1172
               

               
Cow position:
               
chr21:12960810-12960973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
50, 11
               

               
Conread position:
               
1014-1176
               

               
Cow position:
               
chr21:35569296-35569457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
8, 59
               

               
Conread position:
               
1018-1173
               

               
Cow position:
               
chr21:8985635-8985471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
1018-1173
               

               
Cow position:
               
chr21:28882221-28882059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
11, 157
               

               
Conread position:
               
1018-1176
               

               
Cow position:
               
chr21:2294066-2293908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
99, 47
               

               
Conread position:
               
1018-1176
               

               
Cow position:
               
chr21:21077409-21077248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
1021-1176
               

               
Cow position:
               
chr21:2785696-2785854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
62, 49
               

               
Conread position:
               
1021-1176
               

               
Cow position:
               
chr21:27743829-27743665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
1021-1176
               

               
Cow position:
               
chr21:28617671-28617509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
1022-1173
               

               
Cow position:
               
chr21:9862563-9862713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
52, 87
               

               
Conread position:
               
1024-1172
               

               
Cow position:
               
chr21:39809971-39809822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
60, 41
               

               
Conread position:
               
1024-1173
               

               
Cow position:
               
chr21:36793972-36793812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
38, 153
               

               
Conread position:
               
1026-1176
               

               
Cow position:
               
chr21:9979895-9980042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
57, 39
               

               
Conread position:
               
1029-1176
               

               
Cow position:
               
chr21:4568357-4568207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
41, 30
               

               
Conread position:
               
1031-1176
               

               
Cow position:
               
chr21:911896-912045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
53, 39
               

               
Conread position:
               
1034-1176
               

               
Cow position:
               
chr21:42913676-42913822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
49, 119
               

               
Conread position:
               
1045-1176
               

               
Cow position:
               
chr21:12617196-12617059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
14, 0
               
Show alignments to all cow chromosomes.