Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8053H07.3
        

               Conread position:
               727-1176
               

               Cow position:
               chr28:6642972-6643413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               460
               

               Alignm identity:
               303
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               168, 41
               

               Conread position:
               807-1054
               

               Cow position:
               chr28:28513719-28513478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               91, 9
               

               Conread position:
               819-1049
               

               Cow position:
               chr28:21207131-21207374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               33, 12
               

               Conread position:
               823-1176
               

               Cow position:
               chr28:25564308-25563944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               253
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               23, 17
               

               Conread position:
               828-1172
               

               Cow position:
               chr28:1538386-1538036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               248
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               26, 89
               

               Conread position:
               828-1176
               

               Cow position:
               chr28:16918934-16919296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               248
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               9, 184
               

               Conread position:
               829-1176
               

               Cow position:
               chr28:23676350-23676004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 93
               

               Conread position:
               831-1113
               

               Cow position:
               chr28:7157044-7156769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               64, 11
               

               Conread position:
               831-1176
               

               Cow position:
               chr28:14495037-14494702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 17
               

               Conread position:
               844-1176
               

               Cow position:
               chr28:23007518-23007870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               844-1176
               

               Cow position:
               chr28:25727588-25727241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               253
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               79, 21
               

               Conread position:
               850-1082
               

               Cow position:
               chr28:9294296-9294533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 77
               

               Conread position:
               850-1176
               

               Cow position:
               chr28:3143671-3144028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               259
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               48, 9
               

               Conread position:
               850-1176
               

               Cow position:
               chr28:23410118-23410462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               244
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               6, 249
               

               Conread position:
               851-998
               

               Cow position:
               chr28:8617030-8616876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               44, 75
               

               Conread position:
               851-1067
               

               Cow position:
               chr28:5205464-5205246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               44, 8
               

               Conread position:
               851-1104
               

               Cow position:
               chr28:7618947-7619215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               189
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               47, 8
               

               Conread position:
               851-1123
               

               Cow position:
               chr28:7350863-7350574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               201
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               45, 17
               

               Conread position:
               851-1168
               

               Cow position:
               chr28:5074307-5074638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               47, 183
               

               Conread position:
               851-1171
               

               Cow position:
               chr28:11866454-11866796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               247
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               47, 231
               

               Conread position:
               851-1176
               

               Cow position:
               chr28:4764072-4763738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               233
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               53, 84
               

               Conread position:
               851-1176
               

               Cow position:
               chr28:10863586-10863918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               71, 44
               

               Conread position:
               851-1176
               

               Cow position:
               chr28:11426334-11426678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               246
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               47, 103
               

               Conread position:
               852-1171
               

               Cow position:
               chr28:25825669-25826002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               238
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               14, 77
               

               Conread position:
               853-1077
               

               Cow position:
               chr28:11816473-11816702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               77, 12
               

               Conread position:
               853-1176
               

               Cow position:
               chr28:5931556-5931216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               246
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               42, 162
               

               Conread position:
               853-1176
               

               Cow position:
               chr28:11884318-11884656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               228
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               13, 213
               

               Conread position:
               854-1167
               

               Cow position:
               chr28:8291624-8291308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               230
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               43, 72
               

               Conread position:
               854-1170
               

               Cow position:
               chr28:11500699-11501020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               233
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               15, 36
               

               Conread position:
               854-1172
               

               Cow position:
               chr28:29416515-29416845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               232
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               42, 5
               

               Conread position:
               854-1173
               

               Cow position:
               chr28:4016733-4016405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               239
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               42, 5
               

               Conread position:
               855-1160
               

               Cow position:
               chr28:5406735-5406433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               225
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               10, 46
               

               Conread position:
               855-1173
               

               Cow position:
               chr28:26719539-26719217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 10
               

               Conread position:
               855-1174
               

               Cow position:
               chr28:5193533-5193186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               247
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               76, 165
               

               Conread position:
               856-1072
               

               Cow position:
               chr28:16214676-16214900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               42, 208
               

               Conread position:
               856-1072
               

               Cow position:
               chr28:26372929-26372712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               176
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               40, 13
               

               Conread position:
               856-1108
               

               Cow position:
               chr28:4013292-4013020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               188
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               42, 227
               

               Conread position:
               856-1112
               

               Cow position:
               chr28:31165791-31166056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               195
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               13, 72
               

               Conread position:
               856-1139
               

               Cow position:
               chr28:19253668-19253379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               39, 76
               

               Conread position:
               856-1150
               

               Cow position:
               chr28:19564026-19564338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               228
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               39, 272
               

               Conread position:
               856-1152
               

               Cow position:
               chr28:4881040-4881349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 30
               

               Conread position:
               856-1152
               

               Cow position:
               chr28:5827141-5826838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               16, 72
               

               Conread position:
               856-1171
               

               Cow position:
               chr28:30937474-30937794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               226
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               67, 39
               

               Conread position:
               856-1172
               

               Cow position:
               chr28:4071167-4070837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               40, 228
               

               Conread position:
               856-1172
               

               Cow position:
               chr28:20124990-20124651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               233
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               856-1173
               

               Cow position:
               chr28:14508176-14508502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               22, 73
               

               Conread position:
               856-1176
               

               Cow position:
               chr28:3769474-3769798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               242
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               28, 86
               

               Conread position:
               856-1176
               

               Cow position:
               chr28:16369879-16370212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               227
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               13, 243
               

               Conread position:
               856-1176
               

               Cow position:
               chr28:18139265-18139588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 14
               

               Conread position:
               856-1176
               

               Cow position:
               chr28:25057165-25056834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               221
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               40, 263
               

               Conread position:
               856-1176
               

               Cow position:
               chr28:25249544-25249218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               222
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               70, 42
               

               Conread position:
               857-1176
               

               Cow position:
               chr28:30746529-30746864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 52
               

               Conread position:
               859-1068
               

               Cow position:
               chr28:19217018-19216795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               164
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               39, 159
               

               Conread position:
               859-1111
               

               Cow position:
               chr28:17012099-17012361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               37, 235
               

               Conread position:
               859-1169
               

               Cow position:
               chr28:11346283-11346614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               234
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               39, 226
               

               Conread position:
               859-1171
               

               Cow position:
               chr28:23668598-23668917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               228
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               108, 36
               

               Conread position:
               859-1172
               

               Cow position:
               chr28:4274658-4274975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               38, 68
               

               Conread position:
               859-1172
               

               Cow position:
               chr28:7008775-7009107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 222
               

               Conread position:
               859-1173
               

               Cow position:
               chr28:21046383-21046701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               229
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               39, 213
               

               Conread position:
               859-1176
               

               Cow position:
               chr28:15081739-15082062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               112, 36
               

               Conread position:
               859-1176
               

               Cow position:
               chr28:22571478-22571801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 180
               

               Conread position:
               859-1176
               

               Cow position:
               chr28:23724263-23724591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               36, 219
               

               Conread position:
               859-1176
               

               Cow position:
               chr28:23793114-23793439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               241
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               72, 29
               

               Conread position:
               859-1176
               

               Cow position:
               chr28:30326895-30327227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               216
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               39, 155
               

               Conread position:
               859-1176
               

               Cow position:
               chr28:30607991-30608318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               239
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               37, 185
               

               Conread position:
               859-1176
               

               Cow position:
               chr28:32366024-32365710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               240
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               111, 43
               

               Conread position:
               860-1134
               

               Cow position:
               chr28:7539971-7540254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               8, 68
               

               Conread position:
               860-1148
               

               Cow position:
               chr28:32366066-32366345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               223, 63
               

               Conread position:
               860-1172
               

               Cow position:
               chr28:21570362-21570056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               230
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               35, 66
               

               Conread position:
               860-1173
               

               Cow position:
               chr28:21845156-21844826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               239
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               36, 180
               

               Conread position:
               860-1176
               

               Cow position:
               chr28:18934640-18934319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               232
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               32, 64
               

               Conread position:
               861-1040
               

               Cow position:
               chr28:26784052-26784239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               861-1068
               

               Cow position:
               chr28:21008467-21008691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               163
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               33, 147
               

               Conread position:
               861-1156
               

               Cow position:
               chr28:10588829-10589136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               37, 104
               

               Conread position:
               861-1158
               

               Cow position:
               chr28:10615746-10616064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               34, 218
               

               Conread position:
               861-1165
               

               Cow position:
               chr28:5204389-5204067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               230
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               51, 34
               

               Conread position:
               861-1168
               

               Cow position:
               chr28:21502586-21502266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               231
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               41, 94
               

               Conread position:
               861-1173
               

               Cow position:
               chr28:662304-661977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               234
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               33, 233
               

               Conread position:
               861-1176
               

               Cow position:
               chr28:3492583-3492921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               34, 170
               

               Conread position:
               861-1176
               

               Cow position:
               chr28:10053128-10053472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               237
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               861-1176
               

               Cow position:
               chr28:11585005-11585341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               862-1176
               

               Cow position:
               chr28:3746400-3746069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               36, 223
               

               Conread position:
               862-1176
               

               Cow position:
               chr28:26615056-26614748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               224
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               111, 59
               

               Conread position:
               863-1168
               

               Cow position:
               chr28:3078494-3078809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               217
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               50, 36
               

               Conread position:
               863-1172
               

               Cow position:
               chr28:3023714-3024044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               224
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               35, 275
               

               Conread position:
               863-1176
               

               Cow position:
               chr28:616571-616248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 112
               

               Conread position:
               863-1176
               

               Cow position:
               chr28:2131740-2132055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               49, 32
               

               Conread position:
               867-1079
               

               Cow position:
               chr28:11180986-11181199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               93, 55
               

               Conread position:
               867-1176
               

               Cow position:
               chr28:7267751-7268072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               226
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               31, 155
               

               Conread position:
               867-1176
               

               Cow position:
               chr28:17362422-17362725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               221
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               32, 71
               

               Conread position:
               867-1176
               

               Cow position:
               chr28:33163278-33163600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               225
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               31, 148
               

               Conread position:
               868-1045
               

               Cow position:
               chr28:17727915-17728102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               28, 129
               

               Conread position:
               869-1170
               

               Cow position:
               chr28:24343549-24343240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               228
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               26, 159
               

               Conread position:
               871-1153
               

               Cow position:
               chr28:12933542-12933844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               25, 211
               

               Conread position:
               871-1173
               

               Cow position:
               chr28:15678062-15677760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               217
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               21, 56
               

               Conread position:
               872-1176
               

               Cow position:
               chr28:20963354-20963665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               226
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               21, 55
               

               Conread position:
               873-1169
               

               Cow position:
               chr28:13866015-13865713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 64
               

               Conread position:
               873-1171
               

               Cow position:
               chr28:3914897-3914579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               874-1101
               

               Cow position:
               chr28:7805254-7805484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               183
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               92, 20
               

               Conread position:
               876-1173
               

               Cow position:
               chr28:7548894-7549192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               207, 14
               

               Conread position:
               879-1176
               

               Cow position:
               chr28:5436925-5437224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               213
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               202, 31
               

               Conread position:
               882-1162
               

               Cow position:
               chr28:13474456-13474178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               85, 27
               

               Conread position:
               884-1170
               

               Cow position:
               chr28:12430763-12430477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               82, 24
               

               Conread position:
               884-1172
               

               Cow position:
               chr28:4307737-4308041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               216
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               79, 26
               

               Conread position:
               884-1173
               

               Cow position:
               chr28:22332687-22332402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               79, 25
               

               Conread position:
               884-1176
               

               Cow position:
               chr28:4834686-4834978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               83, 25
               

               Conread position:
               884-1176
               

               Cow position:
               chr28:8347890-8347594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               79, 26
               

               Conread position:
               884-1176
               

               Cow position:
               chr28:11828803-11829074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               208
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               84, 27
               

               Conread position:
               885-1068
               

               Cow position:
               chr28:5630254-5630072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               83, 25
               

               Conread position:
               885-1171
               

               Cow position:
               chr28:3449464-3449168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               209
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               41, 25
               

               Conread position:
               887-1176
               

               Cow position:
               chr28:18591431-18591137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               202
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               29, 130
               

               Conread position:
               890-1078
               

               Cow position:
               chr28:8336114-8335925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               60, 33
               

               Conread position:
               892-1111
               

               Cow position:
               chr28:24707056-24706834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               19, 181
               

               Conread position:
               892-1112
               

               Cow position:
               chr28:20397220-20397439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               75, 29
               

               Conread position:
               892-1173
               

               Cow position:
               chr28:4884105-4884396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               205
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               76, 18
               

               Conread position:
               894-1151
               

               Cow position:
               chr28:17601726-17601986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               199
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               76, 29
               

               Conread position:
               895-1169
               

               Cow position:
               chr28:21598104-21598383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               53, 12
               

               Conread position:
               897-1176
               

               Cow position:
               chr28:9176614-9176888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               197
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               68, 13
               

               Conread position:
               909-1172
               

               Cow position:
               chr28:6971213-6971476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               186
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               59, 15
               

               Conread position:
               909-1173
               

               Cow position:
               chr28:34230365-34230097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               54, 178
               

               Conread position:
               919-1176
               

               Cow position:
               chr28:26922240-26922501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               13, 148
               

               Conread position:
               923-1161
               

               Cow position:
               chr28:11079424-11079185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               45, 19
               

               Conread position:
               923-1169
               

               Cow position:
               chr28:3740998-3740751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               45, 13
               

               Conread position:
               923-1176
               

               Cow position:
               chr28:19222028-19222278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               32, 86
               

               Conread position:
               923-1176
               

               Cow position:
               chr28:26220378-26220119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               176
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               47, 13
               

               Conread position:
               924-1052
               

               Cow position:
               chr28:19038898-19039029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               102
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               47, 11
               

               Conread position:
               924-1081
               

               Cow position:
               chr28:5650616-5650774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               43, 141
               

               Conread position:
               924-1142
               

               Cow position:
               chr28:15601397-15601173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               28, 87
               

               Conread position:
               924-1159
               

               Cow position:
               chr28:3484706-3484459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               21, 118
               

               Conread position:
               924-1168
               

               Cow position:
               chr28:18354207-18354452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               37, 12
               

               Conread position:
               924-1172
               

               Cow position:
               chr28:5128607-5128858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               41, 12
               

               Conread position:
               924-1173
               

               Cow position:
               chr28:3408096-3408347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               179
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               10, 144
               

               Conread position:
               924-1173
               

               Cow position:
               chr28:5817964-5817709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               191
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               39, 151
               

               Conread position:
               924-1173
               

               Cow position:
               chr28:8787661-8787406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               39, 130
               

               Conread position:
               924-1173
               

               Cow position:
               chr28:14649463-14649215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               46, 18
               

               Conread position:
               924-1173
               

               Cow position:
               chr28:25399990-25399747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               44, 81
               

               Conread position:
               924-1173
               

               Cow position:
               chr28:28164206-28163952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               179
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               46, 18
               

               Conread position:
               924-1176
               

               Cow position:
               chr28:21868579-21868319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               187
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               924-1176
               

               Cow position:
               chr28:22346143-22345883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               41, 187
               

               Conread position:
               924-1176
               

               Cow position:
               chr28:33884522-33884272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               175
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               39, 10
               

               Conread position:
               925-1110
               

               Cow position:
               chr28:20759581-20759770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               45, 140
               

               Conread position:
               925-1121
               

               Cow position:
               chr28:17601433-17601636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               38, 145
               

               Conread position:
               925-1130
               

               Cow position:
               chr28:11559511-11559724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               925-1142
               

               Cow position:
               chr28:11307396-11307610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               925-1150
               

               Cow position:
               chr28:32174750-32174519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               45, 123
               

               Conread position:
               925-1152
               

               Cow position:
               chr28:5166888-5166654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               38, 83
               

               Conread position:
               925-1168
               

               Cow position:
               chr28:27161206-27161460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               190
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               45, 143
               

               Conread position:
               925-1172
               

               Cow position:
               chr28:4355667-4355416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               45, 31
               

               Conread position:
               925-1172
               

               Cow position:
               chr28:33052157-33051896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               198
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               43, 17
               

               Conread position:
               925-1173
               

               Cow position:
               chr28:2899110-2898862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               193
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               42, 140
               

               Conread position:
               925-1173
               

               Cow position:
               chr28:2960709-2960965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               193
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               925-1173
               

               Cow position:
               chr28:24966508-24966258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               36, 112
               

               Conread position:
               925-1173
               

               Cow position:
               chr28:26743747-26743485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               197
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               40, 146
               

               Conread position:
               925-1173
               

               Cow position:
               chr28:29988990-29989246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               38, 17
               

               Conread position:
               925-1176
               

               Cow position:
               chr28:7697861-7698117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               43, 88
               

               Conread position:
               925-1176
               

               Cow position:
               chr28:8408845-8408598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               159, 36
               

               Conread position:
               925-1176
               

               Cow position:
               chr28:9812392-9812147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               157, 33
               

               Conread position:
               925-1176
               

               Cow position:
               chr28:19025884-19026148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               43, 77
               

               Conread position:
               925-1176
               

               Cow position:
               chr28:25806684-25806435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               185
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               157, 36
               

               Conread position:
               926-1171
               

               Cow position:
               chr28:5684822-5684579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               44, 23
               

               Conread position:
               926-1176
               

               Cow position:
               chr28:11752020-11752277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               39, 8
               

               Conread position:
               926-1176
               

               Cow position:
               chr28:12964687-12964434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               33, 71
               

               Conread position:
               926-1176
               

               Cow position:
               chr28:31109883-31110142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               182
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               14, 84
               

               Conread position:
               927-1069
               

               Cow position:
               chr28:18770199-18770057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               41, 69
               

               Conread position:
               927-1131
               

               Cow position:
               chr28:12046794-12047005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               40, 202
               

               Conread position:
               927-1168
               

               Cow position:
               chr28:20313396-20313144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               193
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               41, 142
               

               Conread position:
               927-1173
               

               Cow position:
               chr28:6059352-6059602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               189
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               41, 7
               

               Conread position:
               927-1173
               

               Cow position:
               chr28:24082389-24082134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               41, 122
               

               Conread position:
               927-1176
               

               Cow position:
               chr28:14998185-14997929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               36, 19
               

               Conread position:
               927-1176
               

               Cow position:
               chr28:19079727-19079981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               36, 22
               

               Conread position:
               927-1176
               

               Cow position:
               chr28:25596747-25596496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               182
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               41, 79
               

               Conread position:
               928-1106
               

               Cow position:
               chr28:4765794-4765611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               39, 140
               

               Conread position:
               928-1108
               

               Cow position:
               chr28:7437354-7437526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               928-1127
               

               Cow position:
               chr28:7388654-7388855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               151
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               36, 78
               

               Conread position:
               928-1152
               

               Cow position:
               chr28:7372004-7372233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               37, 222
               

               Conread position:
               928-1166
               

               Cow position:
               chr28:12672346-12672587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               33, 82
               

               Conread position:
               928-1168
               

               Cow position:
               chr28:26982620-26982871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               188
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               37, 136
               

               Conread position:
               928-1170
               

               Cow position:
               chr28:10172299-10172540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               40, 56
               

               Conread position:
               928-1171
               

               Cow position:
               chr28:2752376-2752629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               187
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               42, 136
               

               Conread position:
               928-1171
               

               Cow position:
               chr28:27218440-27218193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               35, 61
               

               Conread position:
               928-1172
               

               Cow position:
               chr28:4159073-4158826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               42, 141
               

               Conread position:
               928-1172
               

               Cow position:
               chr28:21103712-21103977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               35, 25
               

               Conread position:
               928-1176
               

               Cow position:
               chr28:4643652-4643899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               34, 138
               

               Conread position:
               928-1176
               

               Cow position:
               chr28:5144403-5144658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               187
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               39, 150
               

               Conread position:
               928-1176
               

               Cow position:
               chr28:5236486-5236735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               35, 81
               

               Conread position:
               928-1176
               

               Cow position:
               chr28:9285259-9285510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               38, 69
               

               Conread position:
               928-1176
               

               Cow position:
               chr28:14512650-14512386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 7
               

               Conread position:
               928-1176
               

               Cow position:
               chr28:18759937-18760183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               85, 40
               

               Conread position:
               928-1176
               

               Cow position:
               chr28:19262469-19262725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               35, 127
               

               Conread position:
               929-1135
               

               Cow position:
               chr28:2524059-2523847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               41, 79
               

               Conread position:
               929-1150
               

               Cow position:
               chr28:34247914-34248133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               39, 11
               

               Conread position:
               929-1172
               

               Cow position:
               chr28:8140599-8140350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               41, 136
               

               Conread position:
               929-1176
               

               Cow position:
               chr28:4282374-4282626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               193
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               34, 89
               

               Conread position:
               929-1176
               

               Cow position:
               chr28:9636340-9636589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               41, 168
               

               Conread position:
               929-1176
               

               Cow position:
               chr28:21355348-21355090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               198
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               34, 127
               

               Conread position:
               930-1173
               

               Cow position:
               chr28:13176573-13176808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               184
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               36, 70
               

               Conread position:
               932-1176
               

               Cow position:
               chr28:15043748-15043997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               180
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               38, 71
               

               Conread position:
               933-1161
               

               Cow position:
               chr28:9100039-9099814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               151, 30
               

               Conread position:
               934-1175
               

               Cow position:
               chr28:21380992-21380743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               934-1176
               

               Cow position:
               chr28:4138559-4138806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               36, 75
               

               Conread position:
               935-1107
               

               Cow position:
               chr28:4823705-4823541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               147, 26
               

               Conread position:
               935-1176
               

               Cow position:
               chr28:7228280-7228519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               30, 7
               

               Conread position:
               936-1172
               

               Cow position:
               chr28:23621644-23621415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               24, 40
               

               Conread position:
               937-1176
               

               Cow position:
               chr28:2862977-2862729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               937-1176
               

               Cow position:
               chr28:4841291-4841528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               64, 24
               

               Conread position:
               942-1172
               

               Cow position:
               chr28:20409491-20409260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               24, 45
               

               Conread position:
               942-1173
               

               Cow position:
               chr28:11786613-11786846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               167
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               26, 165
               

               Conread position:
               942-1173
               

               Cow position:
               chr28:25728298-25728065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               182
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               29, 64
               

               Conread position:
               943-1173
               

               Cow position:
               chr28:2814406-2814633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               171
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               21, 70
               

               Conread position:
               943-1173
               

               Cow position:
               chr28:13693852-13693617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               24, 39
               

               Conread position:
               946-1176
               

               Cow position:
               chr28:18186656-18186418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               24, 100
               

               Conread position:
               949-1176
               

               Cow position:
               chr28:26103799-26103574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               22, 64
               

               Conread position:
               964-1176
               

               Cow position:
               chr28:4098909-4098706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               5, 102
               

               Conread position:
               964-1176
               

               Cow position:
               chr28:15577183-15577397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               5, 55
               

               Conread position:
               965-1173
               

               Cow position:
               chr28:10035464-10035265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               150, 13
               

               Conread position:
               965-1176
               

               Cow position:
               chr28:16687104-16686894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               154
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               105, 84
               

               Conread position:
               966-1176
               

               Cow position:
               chr28:25283270-25283071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               182, 36
               

               Conread position:
               967-1111
               

               Cow position:
               chr28:3160878-3161023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               116, 96
               

               Conread position:
               967-1172
               

               Cow position:
               chr28:10745289-10745077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               967-1173
               

               Cow position:
               chr28:11817892-11818093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               122, 93
               

               Conread position:
               968-1171
               

               Cow position:
               chr28:2872993-2872786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               968-1173
               

               Cow position:
               chr28:13607972-13607754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               38, 195
               

               Conread position:
               968-1176
               

               Cow position:
               chr28:4536533-4536320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               970-1167
               

               Cow position:
               chr28:17235664-17235856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               114, 51
               

               Conread position:
               972-1176
               

               Cow position:
               chr28:10999599-10999809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               88, 154
               

               Conread position:
               973-1172
               

               Cow position:
               chr28:4440365-4440171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               77, 108
               

               Conread position:
               973-1176
               

               Cow position:
               chr28:12947018-12946809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               79, 130
               

               Conread position:
               974-1163
               

               Cow position:
               chr28:24672333-24672141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               21, 31
               

               Conread position:
               974-1176
               

               Cow position:
               chr28:16204266-16204465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               141, 101
               

               Conread position:
               975-1176
               

               Cow position:
               chr28:10529423-10529622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               147
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               109, 101
               

               Conread position:
               976-1176
               

               Cow position:
               chr28:4588163-4587963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               104, 26
               

               Conread position:
               978-1168
               

               Cow position:
               chr28:22485317-22485117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               84, 158
               

               Conread position:
               978-1176
               

               Cow position:
               chr28:19055078-19054879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               74, 138
               

               Conread position:
               980-1173
               

               Cow position:
               chr28:7751239-7751430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               98, 24
               

               Conread position:
               981-1176
               

               Cow position:
               chr28:2737745-2737944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               982-1176
               

               Cow position:
               chr28:3256858-3256661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               100, 77
               

               Conread position:
               984-1176
               

               Cow position:
               chr28:14657755-14657564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               133, 78
               

               Conread position:
               985-1173
               

               Cow position:
               chr28:4058039-4057850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               67, 81
               

               Conread position:
               985-1176
               

               Cow position:
               chr28:3714858-3714665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               999-1176
               

               Cow position:
               chr28:19222561-19222734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               112, 7
               

               Conread position:
               1000-1173
               

               Cow position:
               chr28:26269371-26269197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               83, 9
               

               Conread position:
               1002-1173
               

               Cow position:
               chr28:15008212-15008027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               1004-1176
               

               Cow position:
               chr28:22339032-22338858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               132
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               74, 144
               

               Conread position:
               1005-1176
               

               Cow position:
               chr28:16252821-16252997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               136
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               57, 13
               

               Conread position:
               1007-1173
               

               Cow position:
               chr28:18791051-18790880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               1007-1176
               

               Cow position:
               chr28:28903628-28903806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               1011-1173
               

               Cow position:
               chr28:5904763-5904599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               65, 37
               

               Conread position:
               1014-1176
               

               Cow position:
               chr28:7607948-7608116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               1018-1173
               

               Cow position:
               chr28:5552914-5553076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               1018-1173
               

               Cow position:
               chr28:7542058-7542218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               1021-1176
               

               Cow position:
               chr28:118029-118188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               63, 151
               

               Conread position:
               1021-1176
               

               Cow position:
               chr28:5773657-5773503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               94, 123
               

               Conread position:
               1021-1176
               

               Cow position:
               chr28:19024166-19024001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1023-1172
               

               Cow position:
               chr28:22739811-22739659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               61, 41
               

               Conread position:
               1028-1176
               

               Cow position:
               chr28:9390349-9390499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               56, 36
               

               Conread position:
               1030-1160
               

               Cow position:
               chr28:7547315-7547447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               54, 35
               

               Conread position:
               1031-1176
               

               Cow position:
               chr28:657440-657585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               26, 83
               

               Conread position:
               1031-1176
               

               Cow position:
               chr28:26784452-26784603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               1052-1176
               

               Cow position:
               chr28:6051726-6051599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               103
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               32, 0
               
Show alignments to all cow chromosomes.
Conread position:	727-1176
Cow position:	chr28:6642972-6643413 (view UCSC Genome Browser custom track)
Alignm length:	460
Alignm identity:	303
Alignm E-value:	2e-36
Alignm gaps (pig, cow):	168, 41
Conread position:	807-1054
Cow position:	chr28:28513719-28513478 (view UCSC Genome Browser custom track)
Alignm length:	256
Alignm identity:	176
Alignm E-value:	4e-21
Alignm gaps (pig, cow):	91, 9
Conread position:	819-1049
Cow position:	chr28:21207131-21207374 (view UCSC Genome Browser custom track)
Alignm length:	246
Alignm identity:	173
Alignm E-value:	7e-27
Alignm gaps (pig, cow):	33, 12
Conread position:	823-1176
Cow position:	chr28:25564308-25563944 (view UCSC Genome Browser custom track)
Alignm length:	374
Alignm identity:	253
Alignm E-value:	1e-30
Alignm gaps (pig, cow):	23, 17
Conread position:	828-1172
Cow position:	chr28:1538386-1538036 (view UCSC Genome Browser custom track)
Alignm length:	362
Alignm identity:	248
Alignm E-value:	1e-31
Alignm gaps (pig, cow):	26, 89
Conread position:	828-1176
Cow position:	chr28:16918934-16919296 (view UCSC Genome Browser custom track)
Alignm length:	372
Alignm identity:	248
Alignm E-value:	3e-28
Alignm gaps (pig, cow):	9, 184
Conread position:	829-1176
Cow position:	chr28:23676350-23676004 (view UCSC Genome Browser custom track)
Alignm length:	357
Alignm identity:	252
Alignm E-value:	0
Alignm gaps (pig, cow):	68, 93
Conread position:	831-1113
Cow position:	chr28:7157044-7156769 (view UCSC Genome Browser custom track)
Alignm length:	289
Alignm identity:	210
Alignm E-value:	3e-38
Alignm gaps (pig, cow):	64, 11
Conread position:	831-1176
Cow position:	chr28:14495037-14494702 (view UCSC Genome Browser custom track)
Alignm length:	349
Alignm identity:	247
Alignm E-value:	0
Alignm gaps (pig, cow):	22, 17
Conread position:	844-1176
Cow position:	chr28:23007518-23007870 (view UCSC Genome Browser custom track)
Alignm length:	353
Alignm identity:	271
Alignm E-value:	0
Alignm gaps (pig, cow):	19, 0
Conread position:	850-1082
Cow position:	chr28:9294296-9294533 (view UCSC Genome Browser custom track)
Alignm length:	242
Alignm identity:	189
Alignm E-value:	0
Alignm gaps (pig, cow):	48, 77
Conread position:	850-1176
Cow position:	chr28:3143671-3144028 (view UCSC Genome Browser custom track)
Alignm length:	362
Alignm identity:	259
Alignm E-value:	9e-39
Alignm gaps (pig, cow):	48, 9
Conread position:	851-998
Cow position:	chr28:8617030-8616876 (view UCSC Genome Browser custom track)
Alignm length:	156
Alignm identity:	118
Alignm E-value:	1e-22
Alignm gaps (pig, cow):	44, 75
Conread position:	851-1067
Cow position:	chr28:5205464-5205246 (view UCSC Genome Browser custom track)
Alignm length:	224
Alignm identity:	159
Alignm E-value:	7e-26
Alignm gaps (pig, cow):	44, 8
Conread position:	851-1104
Cow position:	chr28:7618947-7619215 (view UCSC Genome Browser custom track)
Alignm length:	270
Alignm identity:	189
Alignm E-value:	9e-29
Alignm gaps (pig, cow):	47, 8
Conread position:	851-1123
Cow position:	chr28:7350863-7350574 (view UCSC Genome Browser custom track)
Alignm length:	294
Alignm identity:	201
Alignm E-value:	7e-26
Alignm gaps (pig, cow):	45, 17
Conread position:	851-1168
Cow position:	chr28:5074307-5074638 (view UCSC Genome Browser custom track)
Alignm length:	333
Alignm identity:	220
Alignm E-value:	1e-29
Alignm gaps (pig, cow):	47, 183
Conread position:	851-1171
Cow position:	chr28:11866454-11866796 (view UCSC Genome Browser custom track)
Alignm length:	347
Alignm identity:	247
Alignm E-value:	3e-39
Alignm gaps (pig, cow):	47, 231
Conread position:	851-1176
Cow position:	chr28:4764072-4763738 (view UCSC Genome Browser custom track)
Alignm length:	338
Alignm identity:	233
Alignm E-value:	3e-39
Alignm gaps (pig, cow):	53, 84
Conread position:	852-1171
Cow position:	chr28:25825669-25826002 (view UCSC Genome Browser custom track)
Alignm length:	339
Alignm identity:	238
Alignm E-value:	9e-39
Alignm gaps (pig, cow):	14, 77